TitleAssistant Professor
InstitutionBaylor College of Medicine
DepartmentDepartment of Pediatrics
Address6701 FANNIN
Houston, TX 77030
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Reimer-McAtee M, Corsi G, Reed E, Boston KM, Yalamanchili H, Burnazian G, Bassett S, Butler J, McGinnis-Cole T, Chavez V, Wanger A, Ostrosky-Zeichner L. Successful implementation of the CDC recommendations during the care of 2 patients with Candida auris in in-patient rehabilitation and intensive care settings. Am J Infect Control. 2020 Aug 20. PMID: 32828800.
      Citations:    Fields:    
    2. Yalamanchili HK, Alcott CE, Ji P, Wagner EJ, Zoghbi HY, Liu Z. PolyA-miner: accurate assessment of differential alternative poly-adenylation from 3'Seq data using vector projections and non-negative matrix factorization. Nucleic Acids Res. 2020 07 09; 48(12):e69. PMID: 32463457.
      Citations:    Fields:    Translation:HumansAnimalsCells
    3. Alcott CE, Yalamanchili HK, Ji P, van der Heijden ME, Saltzman A, Elrod N, Lin A, Leng M, Bhatt B, Hao S, Wang Q, Saliba A, Tang J, Malovannaya A, Wagner EJ, Liu Z, Zoghbi HY. Partial loss of CFIm25 causes learning deficits and aberrant neuronal alternative polyadenylation. Elife. 2020 04 22; 9. PMID: 32319885.
      Citations: 3     Fields:    
    4. Zhou W, He Y, Rehman AU, Kong Y, Hong S, Ding G, Yalamanchili HK, Wan YW, Paul B, Wang C, Gong Y, Zhou W, Liu H, Dean J, Scalais E, O'Driscoll M, Morton JEV, Hou X, Wu Q, Tong Q, Liu Z, Liu P, Xu Y, Sun Z. Author Correction: Loss of function of NCOR1 and NCOR2 impairs memory through a novel GABAergic hypothalamus-CA3 projection. Nat Neurosci. 2019 Sep; 22(9):1533. PMID: 31222187.
      Citations:    Fields:    
    5. Zhou W, He Y, Rehman AU, Kong Y, Hong S, Ding G, Yalamanchili HK, Wan YW, Paul B, Wang C, Gong Y, Zhou W, Liu H, Dean J, Scalais E, O'Driscoll M, Morton JEV, Hou X, Wu Q, Tong Q, Liu Z, Liu P, Xu Y, Sun Z. Loss of function of NCOR1 and NCOR2 impairs memory through a novel GABAergic hypothalamus-CA3 projection. Nat Neurosci. 2019 02; 22(2):205-217. PMID: 30664766.
      Citations: 8     Fields:    Translation:AnimalsCells
    6. Yalamanchili H, Dandachi D, Okhuysen PC. Use and Interpretation of Enteropathogen Multiplex Nucleic Acid Amplification Tests in Patients With Suspected Infectious Diarrhea. Gastroenterol Hepatol (N Y). 2018 Nov; 14(11):646-652. PMID: 30538605.
    7. De Maio A, Yalamanchili HK, Adamski CJ, Gennarino VA, Liu Z, Qin J, Jung SY, Richman R, Orr H, Zoghbi HY. RBM17 Interacts with U2SURP and CHERP to Regulate Expression and Splicing of RNA-Processing Proteins. Cell Rep. 2018 10 16; 25(3):726-736.e7. PMID: 30332651.
      Citations: 5     Fields:    Translation:HumansAnimalsCells
    8. Raman AT, Pohodich AE, Wan YW, Yalamanchili HK, Lowry WE, Zoghbi HY, Liu Z. Apparent bias toward long gene misregulation in MeCP2 syndromes disappears after controlling for baseline variations. Nat Commun. 2018 08 13; 9(1):3225. PMID: 30104565.
      Citations: 7     Fields:    Translation:HumansAnimalsCells
    9. Jeong HH, Yalamanchili HK, Guo C, Shulman JM, Liu Z. An ultra-fast and scalable quantification pipeline for transposable elements from next generation sequencing data. Pac Symp Biocomput. 2018; 23:168-179. PMID: 29218879.
      Citations: 12     Fields:    Translation:HumansAnimalsCells
    10. Yalamanchili HK, Wan YW, Liu Z. Data Analysis Pipeline for RNA-seq Experiments: From Differential Expression to Cryptic Splicing. Curr Protoc Bioinformatics. 2017 09 13; 59:11.15.1-11.15.21. PMID: 28902396.
      Citations: 6     Fields:    Translation:Cells
    11. Tan Q, Yalamanchili HK, Park J, De Maio A, Lu HC, Wan YW, White JJ, Bondar VV, Sayegh LS, Liu X, Gao Y, Sillitoe RV, Orr HT, Liu Z, Zoghbi HY. Extensive cryptic splicing upon loss of RBM17 and TDP43 in neurodegeneration models. Hum Mol Genet. 2016 12 01; 25(23):5083-5093. PMID: 28007900.
      Citations: 22     Fields:    Translation:HumansAnimalsCells
    12. Lo YH, Chung E, Li Z, Wan YW, Mahe MM, Chen MS, Noah TK, Bell KN, Yalamanchili HK, Klisch TJ, Liu Z, Park JS, Shroyer NF. Transcriptional Regulation by ATOH1 and its Target SPDEF inĀ theĀ Intestine. Cell Mol Gastroenterol Hepatol. 2017 Jan; 3(1):51-71. PMID: 28174757.
      Citations: 16     Fields:    
    13. Dineshram R, Quan Q, Sharma R, Chandramouli K, Yalamanchili HK, Chu I, Thiyagarajan V. Comparative and quantitative proteomics reveal the adaptive strategies of oyster larvae to ocean acidification. Proteomics. 2015 Dec; 15(23-24):4120-34. PMID: 26507238.
      Citations: 2     Fields:    Translation:Animals
    14. Yalamanchili HK, Li Z, Wang P, Wong MP, Yao J, Wang J. SpliceNet: recovering splicing isoform-specific differential gene networks from RNA-Seq data of normal and diseased samples. Nucleic Acids Res. 2014 Sep; 42(15):e121. PMID: 25034693.
      Citations: 6     Fields:    Translation:HumansCells
    15. Qin J, Hu Y, Xu F, Yalamanchili HK, Wang J. Inferring gene regulatory networks by integrating ChIP-seq/chip and transcriptome data via LASSO-type regularization methods. Methods. 2014 Jun 01; 67(3):294-303. PMID: 24650566.
      Citations: 10     Fields:    
    16. Yalamanchili HK, Yan B, Li MJ, Qin J, Zhao Z, Chin FY, Wang J. DDGni: dynamic delay gene-network inference from high-temporal data using gapped local alignment. Bioinformatics. 2014 Feb 01; 30(3):377-83. PMID: 24285602.
      Citations: 8     Fields:    Translation:Animals
    17. Wang P, Lai WF, Li MJ, Xu F, Yalamanchili HK, Lovell-Badge R, Wang J. Inference of gene-phenotype associations via protein-protein interaction and orthology. PLoS One. 2013; 8(10):e77478. PMID: 24194887.
      Citations: 3     Fields:    Translation:Humans
    18. Yalamanchili HK, Xiao QW, Wang J. A novel neural response algorithm for protein function prediction. BMC Syst Biol. 2012; 6 Suppl 1:S19. PMID: 23046521.
      Citations: 2     Fields:    Translation:HumansCells
    19. Yang S, Yalamanchili HK, Li X, Yao KM, Sham PC, Zhang MQ, Wang J. Correlated evolution of transcription factors and their binding sites. Bioinformatics. 2011 Nov 01; 27(21):2972-8. PMID: 21896508.
      Citations: 14     Fields:    Translation:HumansCells
    20. Wu HJ, Wu W, Sun HY, Qin GW, Wang HB, Wang P, Yalamanchili HK, Wang J, Tse HF, Lau CP, Vanhoutte PM, Li GR. Acacetin causes a frequency- and use-dependent blockade of hKv1.5 channels by binding to the S6 domain. J Mol Cell Cardiol. 2011 Dec; 51(6):966-73. PMID: 21906601.
      Citations: 15     Fields:    Translation:HumansCells
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