Item Type | Name |
Concept
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Genes, Regulator
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Concept
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Gene Expression Regulation, Viral
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Concept
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Gene Expression Profiling
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Concept
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Genes, cdc
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Concept
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Gene Regulatory Networks
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Concept
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Multigene Family
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Concept
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Gene Expression Regulation, Fungal
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Concept
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Gene Expression
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Concept
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Open Reading Frames
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Concept
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Amino Acid Sequence
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Concept
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Genome, Helminth
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Concept
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Genome, Human
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Concept
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Polymorphism, Single Nucleotide
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Concept
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Genome, Insect
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Concept
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Gene Library
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Concept
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Genes, myc
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Concept
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Gene Expression Regulation, Neoplastic
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Concept
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Sequence Homology, Amino Acid
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Concept
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Gene Components
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Concept
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Genes, Helminth
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Concept
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Genetic Loci
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Concept
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Genome
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Concept
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Pseudogenes
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Concept
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Genes, Fungal
|
Concept
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Gene Deletion
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Concept
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Gene Duplication
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Concept
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Base Sequence
|
Concept
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Alleles
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Concept
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Gene Knockdown Techniques
|
Concept
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Molecular Sequence Data
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Concept
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Gene Expression Regulation, Developmental
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Concept
|
Conserved Sequence
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Concept
|
Genome, Fungal
|
Concept
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Gene Expression Regulation
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Concept
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Genes, Neoplasm
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Concept
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Genes, p53
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Concept
|
Nucleic Acid Conformation
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Academic Article
|
Population effect model identifies gene expression predictors of survival outcomes in lung adenocarcinoma for both Caucasian and Asian patients.
|
Academic Article
|
A P53-Deficiency Gene Signature Predicts Recurrence Risk of Patients with Early-Stage Lung Adenocarcinoma.
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Academic Article
|
Identification of gene expression levels in primary melanoma associated with clinically meaningful characteristics.
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Academic Article
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A Leukocyte Infiltration Score Defined by a Gene Signature Predicts Melanoma Patient Prognosis.
|
Concept
|
Genetic Pleiotropy
|
Concept
|
Nucleotide Motifs
|
Concept
|
Transcriptome
|
Concept
|
Gene Ontology
|
Academic Article
|
Multifactorial Deep Learning Reveals Pan-Cancer Genomic Tumor Clusters with Distinct Immunogenomic Landscape and Response to Immunotherapy.
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Academic Article
|
A Transcriptionally Definable Subgroup of Triple-Negative Breast and Ovarian Cancer Samples Shows Sensitivity to HSP90 Inhibition.
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Academic Article
|
Computational STAT3 activity inference reveals its roles in the pancreatic tumor microenvironment.
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Academic Article
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Single-cell RNA sequencing reveals the impact of chromosomal instability on glioblastoma cancer stem cells.
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Academic Article
|
Novel putative drugs and key initiating genes for neurodegenerative disease determined using network-based genetic integrative analysis.
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Academic Article
|
Genomic Characterization of Six Virus-Associated Cancers Identifies Changes in the Tumor Immune Microenvironment and Altered Genetic Programs.
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Academic Article
|
Decreased expression of FOXA2 promotes eutopic endometrial cell proliferation and migration in patients with endometriosis.
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Academic Article
|
Reconstruction of enhancer-target networks in 935 samples of human primary cells, tissues and cell lines.
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Academic Article
|
Intestinal stem cell overproliferation resulting from inactivation of the APC tumor suppressor requires the transcription cofactors Earthbound and Erect wing.
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Academic Article
|
Integrated Drug Expression Analysis for leukemia: an integrated in silico and in vivo approach to drug discovery.
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Academic Article
|
Filamentous fungal carbon catabolite repression supports metabolic plasticity and stress responses essential for disease progression.
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Academic Article
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Insulin-Mediated Signaling Facilitates Resistance to PDGFR Inhibition in Proneural hPDGFB-Driven Gliomas.
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Academic Article
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Systematic Pan-Cancer Analysis Reveals Immune Cell Interactions in the Tumor Microenvironment.
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Academic Article
|
MYC Mediates mRNA Cap Methylation of Canonical Wnt/?-Catenin Signaling Transcripts By Recruiting CDK7 and RNA Methyltransferase.
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Academic Article
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Contextual Refinement of Regulatory Targets Reveals Effects on Breast Cancer Prognosis of the Regulome.
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Academic Article
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Inferring condition-specific targets of human TF-TF complexes using ChIP-seq data.
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Academic Article
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Application of pharmacologically induced transcriptomic profiles to interrogate PI3K-Akt-mTOR pathway activity associated with cancer patient prognosis.
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Academic Article
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Application of RNAi-induced gene expression profiles for prognostic prediction in breast cancer.
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Academic Article
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GLITTER: a web-based application for gene link inspection through tissue-specific coexpression.
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Academic Article
|
An intestinal microRNA modulates the homeostatic adaptation to chronic oxidative stress in C. elegans.
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Academic Article
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iTAR: a web server for identifying target genes of transcription factors using ChIP-seq or ChIP-chip data.
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Academic Article
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Identification of Candidate Cyclin-dependent kinase 1 (Cdk1) Substrates in Mitosis by Quantitative Phosphoproteomics.
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Academic Article
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Aberrant expression and hormonal regulation of Galectin-3 in endometriosis women with infertility.
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Academic Article
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Integrative analysis of cancer genes in a functional interactome.
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Academic Article
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Integrative Genomic Analyses Yield Cell-Cycle Regulatory Programs with Prognostic Value.
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Academic Article
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A deep learning framework for modeling structural features of RNA-binding protein targets.
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Academic Article
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Integrative analysis of breast cancer reveals prognostic haematopoietic activity and patient-specific immune response profiles.
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Academic Article
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CircNet: a database of circular RNAs derived from transcriptome sequencing data.
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Academic Article
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Systematic analysis of hematopoietic gene expression profiles for prognostic prediction in acute myeloid leukemia.
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Academic Article
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Integrative Analysis Reveals Regulatory Programs in Endometriosis.
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Academic Article
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IDEA: Integrated Drug Expression Analysis-Integration of Gene Expression and Clinical Data for the Identification of Therapeutic Candidates.
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Academic Article
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Regulators associated with clinical outcomes revealed by DNA methylation data in breast cancer.
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Academic Article
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Loregic: a method to characterize the cooperative logic of regulatory factors.
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Academic Article
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An approach for determining and measuring network hierarchy applied to comparing the phosphorylome and the regulome.
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Academic Article
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Integrative analysis of survival-associated gene sets in breast cancer.
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Academic Article
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Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential.
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Academic Article
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E2F4 regulatory program predicts patient survival prognosis in breast cancer.
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Academic Article
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Big data bioinformatics.
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Academic Article
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Comparative analysis of the transcriptome across distant species.
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Academic Article
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OrthoClust: an orthology-based network framework for clustering data across multiple species.
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Academic Article
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Comparative analysis of regulatory information and circuits across distant species.
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Academic Article
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Relating gene expression evolution with CpG content changes.
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Academic Article
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The histone methyltransferase activity of MLL1 is dispensable for hematopoiesis and leukemogenesis.
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Academic Article
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Effect of estrogen receptor a binding on functional DNA methylation in breast cancer.
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Academic Article
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Association of gamma-aminobutyric acid A receptor a2 gene (GABRA2) with alcohol use disorder.
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Academic Article
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DPRP: a database of phenotype-specific regulatory programs derived from transcription factor binding data.
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Academic Article
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Identification of cell cycle-regulated genes periodically expressed in U2OS cells and their regulation by FOXM1 and E2F transcription factors.
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Academic Article
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Identification of yeast cell cycle regulated genes based on genomic features.
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Academic Article
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REACTIN: regulatory activity inference of transcription factors underlying human diseases with application to breast cancer.
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Academic Article
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An MLL-dependent network sustains hematopoiesis.
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Academic Article
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Transcription factor binding profiles reveal cyclic expression of human protein-coding genes and non-coding RNAs.
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Academic Article
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A comprehensive nuclear receptor network for breast cancer cells.
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Academic Article
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Architecture of the human regulatory network derived from ENCODE data.
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Academic Article
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Understanding transcriptional regulation by integrative analysis of transcription factor binding data.
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Academic Article
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Modeling gene expression using chromatin features in various cellular contexts.
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Academic Article
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Modeling the relative relationship of transcription factor binding and histone modifications to gene expression levels in mouse embryonic stem cells.
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Academic Article
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TIP: a probabilistic method for identifying transcription factor target genes from ChIP-seq binding profiles.
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Academic Article
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Construction and analysis of an integrated regulatory network derived from high-throughput sequencing data.
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Academic Article
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Average rank-based score to measure deregulation of molecular pathway gene sets.
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Academic Article
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Genome-wide analysis of chromatin features identifies histone modification sensitive and insensitive yeast transcription factors.
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Academic Article
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Hormonal regulation of galectin 3 in trophoblasts and its effects on endometrium.
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Academic Article
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A user's guide to the encyclopedia of DNA elements (ENCODE).
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Academic Article
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A statistical framework for modeling gene expression using chromatin features and application to modENCODE datasets.
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Academic Article
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Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data.
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Academic Article
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Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans.
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Academic Article
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Understanding protein evolutionary rate by integrating gene co-expression with protein interactions.
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Academic Article
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Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.
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Academic Article
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Segmental duplications in the human genome reveal details of pseudogene formation.
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Academic Article
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Network modeling identifies molecular functions targeted by miR-204 to suppress head and neck tumor metastasis.
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Academic Article
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Comparative analyses of time-course gene expression profiles of the long-lived sch9Delta mutant.
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Academic Article
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The relationship between the evolution of microRNA targets and the length of their UTRs.
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Academic Article
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mRNA expression profiles show differential regulatory effects of microRNAs between estrogen receptor-positive and estrogen receptor-negative breast cancer.
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Academic Article
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Systematic identification of transcription factors associated with patient survival in cancers.
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Academic Article
|
Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organization.
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Academic Article
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Inferring microRNA activities by combining gene expression with microRNA target prediction.
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Academic Article
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A probe-treatment-reference (PTR) model for the analysis of oligonucleotide expression microarrays.
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Academic Article
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Systematic identification of cell cycle regulated transcription factors from microarray time series data.
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Academic Article
|
Life span extension by calorie restriction depends on Rim15 and transcription factors downstream of Ras/PKA, Tor, and Sch9.
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Academic Article
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Inferring activity changes of transcription factors by binding association with sorted expression profiles.
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Academic Article
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Significant and systematic expression differentiation in long-lived yeast strains.
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Academic Article
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Inference of transcription modification in long-live yeast strains from their expression profiles.
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Academic Article
|
MARD: a new method to detect differential gene expression in treatment-control time courses.
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Academic Article
|
Sir2 blocks extreme life-span extension.
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Academic Article
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Sub-array normalization subject to differentiation.
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Academic Article
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Isolation and characterization of a novel human putative anemia-related gene homologous to mouse sideroflexin.
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Academic Article
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Cloning, expression and characterization of a novel human VMP gene.
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Academic Article
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[Tumor relevance analysis of a highly conserved gene by using gene microarray hybridization].
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Academic Article
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Cloning and characterization of a novel human transcription factor AP-2 beta like gene (TFAP2BL1).
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Academic Article
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Cloning, expression and characterization of a novel human REPS1 gene.
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Academic Article
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Cloning and characterization of a novel human TEKTIN1 gene.
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Academic Article
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Molecular cloning and characterization of a novel Dehydrogenase/reductase (SDR family) member 1 genea from human fetal brain.
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Academic Article
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Molecular cloning, structure and expression of a novel nuclear RNA-binding cyclophilin-like gene (PPIL4) from human fetal brain.
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Academic Article
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A novel human hydroxysteroid dehydrogenase like 1 gene (HSDL1) is highly expressed in reproductive tissues.
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Grant
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Computational Identification of new candidate drugs for lung cancer treatment
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