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ALI JALALI

TitleAssistant Professor
InstitutionBaylor College of Medicine
DepartmentDepartment of Neurosurgery
Address7200 CAMBRIDGE
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. McGinnis JP, Ortiz-Guzman J, Guevara MC, Mallannagari S, Belfort BDW, Bao S, Srivastava S, Morkas M, Ji E, Addison A, Tantry EK, Chen S, Wang Y, Chen Z, Katlowitz KA, Lange JJ, Blessing MM, Mohila CA, Ljungberg MC, Aldave G, Jalali A, Patel A, Sheth SA, Weiner HL, Gopinath S, Rao G, Harmanci AS, Curry D, Arenkiel BR, McGinnis JP, Ortiz-Guzman J, Guevara MC, Mallannagari S, Belfort BDW, Bao S, Srivastava S, Morkas M, Ji E, Addison A, Tantry EK, Chen S, Wang Y, Chen Z, Katlowitz KA, Lange JJ, Blessing MM, Mohila CA, Ljungberg MC, Aldave G, Jalali A, Patel A, Sheth SA, Weiner HL, Gopinath S, Rao G, Harmanci AS, Curry D, Arenkiel BR. Common AAV gene therapy vectors show indiscriminate transduction of living human brain cell types. bioRxiv. 2024 Nov 15. PMID: 39605617; PMCID: PMC11601464.
      Citations:    
    2. Snyder R, Lee S, Athukuri P, Ngo EMT, Fox MG, Fakhri S, Takashima M, Force BK, Samson SL, Gallagher KK, Yoshor D, Jalali A. Epidural Interlay Graft for Pituitary Surgery: A 4-Year Institutional Experience. J Neurol Surg B Skull Base. 2024 Oct; 85(Suppl 2):e10-e15. PMID: 39444773; PMCID: PMC11495900.
      Citations:    
    3. Huang-Hobbs E, Cheng YT, Ko Y, Luna-Figueroa E, Lozzi B, Taylor KR, McDonald M, He P, Chen HC, Yang Y, Maleki E, Lee ZF, Murali S, Williamson MR, Choi D, Curry R, Bayley J, Woo J, Jalali A, Monje M, Noebels JL, Harmanci AS, Rao G, Deneen B. Remote neuronal activity drives glioma progression through SEMA4F. Nature. 2023 Jul; 619(7971):844-850. PMID: 37380778; PMCID: PMC10840127.
      Citations: 9     Fields:    Translation:HumansAnimalsCells
    4. McDonald MF, Prather LL, Helfer CR, Ludmir EB, Echeverria AE, Yust-Katz S, Patel AJ, Deneen B, Rao G, Jalali A, Dhar SU, Amos CI, Mandel JJ. Prevalence of pathogenic germline variants in adult-type diffuse glioma. Neurooncol Pract. 2023 Oct; 10(5):482-490. PMID: 37720399; PMCID: PMC10502787.
      Citations:    
    5. Huang-Hobbs E, Cheng YT, Ko Y, Luna-Figueroa E, Lozzi B, Taylor KR, McDonald M, He P, Chen HC, Yang Y, Maleki E, Lee ZF, Murali S, Williamson M, Choi D, Curry R, Bayley J, Woo J, Jalali A, Monje M, Noebels JL, Harmanci AS, Rao G, Deneen B. Remote neuronal activity drives glioma infiltration via Sema4f. bioRxiv. 2023 Mar 16. PMID: 36993539; PMCID: PMC10055154.
      Citations:    
    6. Yu K, Kong K, Lozzi B, Luna-Figueroa E, Cervantes A, Curry R, Mohila CA, Rao G, Jalali A, Mills GB, Scott KL, Deneen B. In vivo functional characterization of EGFR variants identifies novel drivers of glioblastoma. Neuro Oncol. 2023 03 14; 25(3):471-481. PMID: 36044040; PMCID: PMC10013639.
      Citations:    
    7. Curry RN, Aiba I, Meyer J, Lozzi B, Ko Y, McDonald MF, Rosenbaum A, Cervantes A, Huang-Hobbs E, Cocito C, Greenfield JP, Jalali A, Gavvala J, Mohila C, Serin Harmanci A, Noebels J, Rao G, Deneen B. Glioma epileptiform activity and progression are driven by IGSF3-mediated potassium dysregulation. Neuron. 2023 03 01; 111(5):682-695.e9. PMID: 36787748; PMCID: PMC9991983.
      Citations: 4     Fields:    Translation:HumansAnimals
    8. Reddy S, Flores A, Lee S, Shetty A, Shah D, Heck KA, Jalali A, Mandel JJ, Patel AJ. EWSR1-PATZ1 Fusion Gene in Ependymoma: A Report of Two Adult Cases and Systematic Review of Literature. JCO Precis Oncol. 2022 12; 6:e2200312. PMID: 36480780.
      Citations:    Fields:    
    9. McDonald MF, Athukuri P, Anand A, Gopakumar S, Jalali A, Patel AJ, Rao G, Goodman JC, Lu HC, Mandel JJ. Varied histomorphology and clinical outcomes of FGFR3-TACC3 fusion gliomas. Neurosurg Focus. 2022 12; 53(6):E16. PMID: 36455273.
      Citations:    Fields:    Translation:Humans
    10. Kizek DJ, Goethe EA, Karas PJ, Treiber JM, Jalali A, Gopinath SP, Kass JS. Neurolymphomatosis of the brachial plexus from atypical primary central nervous system lymphoma lesions: A case report and review of the literature. Surg Neurol Int. 2022; 13:464. PMID: 36324946; PMCID: PMC9610036.
      Citations:    
    11. Sardar D, Chen HC, Reyes A, Varadharajan S, Jain A, Mohila C, Curry R, Lozzi B, Rajendran K, Cervantes A, Yu K, Jalali A, Rao G, Mack SC, Deneen B. Sox9 directs divergent epigenomic states in brain tumor subtypes. Proc Natl Acad Sci U S A. 2022 07 19; 119(29):e2202015119. PMID: 35858326; PMCID: PMC9303974.
      Citations:    Fields:    Translation:Animals
    12. Athukuri P, Khan AB, Gadot R, Haque M, Lee S, Gallagher KK, Mims MP, Rivero GA, Barbieri A, Patel AJ, Jalali A. Myeloid sarcoma of the skull base: A case report and systematic literature review. Surg Neurol Int. 2022; 13:220. PMID: 35673665; PMCID: PMC9168333.
      Citations:    
    13. Snyder R, Lee S, Heck K, Mandel JJ, Patel AJ, Jalali A. Hemorrhagic cavum vergae colloid cyst: A presentation of anterograde amnesia without hydrocephalus. Surg Neurol Int. 2022; 13:148. PMID: 35509582; PMCID: PMC9062956.
      Citations:    
    14. Jackson HN, Hadley CC, Khan AB, Gadot R, Bayley JC, Shetty A, Mandel J, Jalali A, Gallagher KK, Sweeney AD, Harmanci AO, Harmanci AS, Klisch T, Gopinath SP, Rao G, Yoshor D, Patel AJ. Racial and Socioeconomic Disparities in Patients With Meningioma: A Retrospective Cohort Study. Neurosurgery. 2022 01 01; 90(1):114-123. PMID: 34982878; PMCID: PMC9514723.
      Citations:    Fields:    Translation:Humans
    15. Mandel JJ, Youssef M, Yust-Katz S, Patel AJ, Jalali A, Li Z, Wu J, Ludmir EB, de Groot JF. IDH mutation status and the development of venous thromboembolism in astrocytoma patients. J Neurol Sci. 2021 Aug 15; 427:117538. PMID: 34146775.
      Citations:    Fields:    Translation:Humans
    16. Jalali A, Yu K, Beechar V, Bosquez Huerta NA, Grichuk A, Mehra D, Lozzi B, Kong K, Scott KL, Rao G, Bainbridge MN, Bondy ML, Deneen B. POT1 Regulates Proliferation and Confers Sexual Dimorphism in Glioma. Cancer Res. 2021 05 15; 81(10):2703-2713. PMID: 33782098; PMCID: PMC8243722.
      Citations:    Fields:    Translation:AnimalsCells
    17. Shi J, Ayeni T, Gallagher KK, Patel AJ, Jalali A, Hernandez DJ, Haskins AD, Sandulache VC, Sturgis EM, Huang AT. Reconstructive Outcomes of Multilayered Closure of Large Skull Base Dural Defects Following Open Anterior Craniofacial Resection. J Neurol Surg B Skull Base. 2022 Aug; 83(4):359-366. PMID: 35903650; PMCID: PMC9324318.
      Citations:    
    18. Lee WC, Reuben A, Hu X, McGranahan N, Chen R, Jalali A, Negrao MV, Hubert SM, Tang C, Wu CC, Lucas AS, Roh W, Suda K, Kim J, Tan AC, Peng DH, Lu W, Tang X, Chow CW, Fujimoto J, Behrens C, Kalhor N, Fukumura K, Coyle M, Thornton R, Gumbs C, Li J, Wu CJ, Little L, Roarty E, Song X, Lee JJ, Sulman EP, Rao G, Swisher S, Diao L, Wang J, Heymach JV, Huse JT, Scheet P, Wistuba II, Gibbons DL, Futreal PA, Zhang J, Gomez D, Zhang J. Multiomics profiling of primary lung cancers and distant metastases reveals immunosuppression as a common characteristic of tumor cells with metastatic plasticity. Genome Biol. 2020 11 04; 21(1):271. PMID: 33148332; PMCID: PMC7640699.
      Citations: 10     Fields:    Translation:HumansAnimalsCells
    19. Soomro Z, Youssef M, Yust-Katz S, Jalali A, Patel AJ, Mandel J. Paraneoplastic syndromes in small cell lung cancer. J Thorac Dis. 2020 Oct; 12(10):6253-6263. PMID: 33209464; PMCID: PMC7656388.
      Citations: 4     
    20. Khan AB, Gadot R, Shetty A, Bayley JC, Hadley CC, Cardenas MF, Jalali A, Harmanci AS, Harmanci AO, Wheeler DA, Klisch TJ, Patel AJ. Identification of novel fusion transcripts in meningioma. J Neurooncol. 2020 Sep; 149(2):219-230. PMID: 32949309; PMCID: PMC7553203.
      Citations:    Fields:    Translation:Humans
    21. Jalali A, Srinivasan VM, Kan P, Duckworth EAM. Association of Anterior Communicating Artery Aneurysms with Triplicate A2 Segment of the Anterior Cerebral Artery. World Neurosurg. 2020 08; 140:e234-e239. PMID: 32407912.
      Citations:    Fields:    Translation:Humans
    22. Reuben A, Zhang J, Chiou SH, Gittelman RM, Li J, Lee WC, Fujimoto J, Behrens C, Liu X, Wang F, Quek K, Wang C, Kheradmand F, Chen R, Chow CW, Lin H, Bernatchez C, Jalali A, Hu X, Wu CJ, Eterovic AK, Parra ER, Yusko E, Emerson R, Benzeno S, Vignali M, Wu X, Ye Y, Little LD, Gumbs C, Mao X, Song X, Tippen S, Thornton RL, Cascone T, Snyder A, Wargo JA, Herbst R, Swisher S, Kadara H, Moran C, Kalhor N, Zhang J, Scheet P, Vaporciyan AA, Sepesi B, Gibbons DL, Robins H, Hwu P, Heymach JV, Sharma P, Allison JP, Baladandayuthapani V, Lee JJ, Davis MM, Wistuba II, Futreal PA, Zhang J. Comprehensive T cell repertoire characterization of non-small cell lung cancer. Nat Commun. 2020 01 30; 11(1):603. PMID: 32001676; PMCID: PMC6992630.
      Citations: 54     Fields:    Translation:HumansCells
    23. Lee S, Karas PJ, Hadley CC, Bayley V JC, Khan AB, Jalali A, Sweeney AD, Klisch TJ, Patel AJ. The Role of Merlin/NF2 Loss in Meningioma Biology. Cancers (Basel). 2019 Oct 24; 11(11). PMID: 31652973; PMCID: PMC6893739.
      Citations: 11     
    24. Youssef M, Ludmir EB, Mandel JJ, Patel AJ, Jalali A, Treiber J, Wu J, McAleer MF, de Groot JF. Treatment strategies for glioblastoma in older patients: age is just a number. J Neurooncol. 2019 Nov; 145(2):357-364. PMID: 31643011.
      Citations: 7     Fields:    Translation:Humans
    25. Patel AJ, Wan YW, Al-Ouran R, Revelli JP, Cardenas MF, Oneissi M, Xi L, Jalali A, Magnotti JF, Muzny DM, Doddapaneni H, Sebastian S, Heck KA, Goodman JC, Gopinath SP, Liu Z, Rao G, Plon SE, Yoshor D, Wheeler DA, Zoghbi HY, Klisch TJ. Molecular profiling predicts meningioma recurrence and reveals loss of DREAM complex repression in aggressive tumors. Proc Natl Acad Sci U S A. 2019 10 22; 116(43):21715-21726. PMID: 31591222; PMCID: PMC6815170.
      Citations: 35     Fields:    Translation:HumansCells
    26. Goethe EA, Youssef M, Patel AJ, Jalali A, Goodman JC, Mandel JJ. Recurrent Papillary Glioneuronal Tumor. World Neurosurg. 2019 Aug; 128:127-130. PMID: 31078809.
      Citations:    Fields:    Translation:HumansCells
    27. Fischer GM, Jalali A, Kircher DA, Lee WC, McQuade JL, Haydu LE, Joon AY, Reuben A, Carapeto FCL, Yang C, Srivastava A, Ambati CR, Sreekumar A, Hudgens CW, Knighton B, Deng W, Ferguson SD, Tawbi HA, Glitza IC, Gershenwald JE, Vashisht Gopal YN, Hwu P, Huse JT, Wargo JA, Futreal PA, Putluri N, Lazar AJ, DeBerardinis RJ, Marszalek JR, Zhang J, Holmen SL, Tetzlaff MT, Davies MA, de Macedo MP. Molecular Profiling Reveals Unique Immune and Metabolic Features of Melanoma Brain Metastases. Cancer Discov. 2019 05; 9(5):628-645. PMID: 30787016; PMCID: PMC6497554.
      Citations: 87     Fields:    Translation:HumansAnimalsCells
    28. Mandel JJ, Youssef M, Nam J, Patel AJ, Jalali A, Ludmir EB, Liu D, Wu J, Armstrong G, Huse J, Bondy M, de Groot JF. Effect of health disparities on overall survival of patients with glioblastoma. J Neurooncol. 2019 Apr; 142(2):365-374. PMID: 30671709.
      Citations: 5     Fields:    Translation:Humans
    29. Xia J, Chiu LY, Nehring RB, Mei Q, Perez M, Zhai Y, Fitzgerald DM, Pribis JP, Wang Y, Hu CW, Powell RT, LaBonte SA, Jalali A, Lentzsch AM, Szafran AT, Joshi MC, Richters M, Gibson JL, Frisch RL, Hastings PJ, Bates D, Queitsch C, Hilsenbeck SG, Coarfa C, Hu JC, Siegele DA, Scott KL, Liang H, Mancini MA, Herman C, Miller KM, Rosenberg SM, Bravo N??ez MA, Matadamas Guzm?n ML. Bacteria-to-Human Protein Networks Reveal Origins of Endogenous DNA Damage. Cell. 2019 01 10; 176(1-2):127-143.e24. PMID: 30633903; PMCID: PMC6344048.
      Citations: 35     Fields:    Translation:HumansCells
    30. Amirian ES, Ostrom QT, Armstrong GN, Lai RK, Gu X, Jacobs DI, Jalali A, Claus EB, Barnholtz-Sloan JS, Il'yasova D, Schildkraut JM, Ali-Osman F, Sadetzki S, Jenkins RB, Lachance DH, Olson SH, Bernstein JL, Merrell RT, Wrensch MR, Johansen C, Houlston RS, Scheurer ME, Shete S, Amos CI, Bondy ML, Melin B. Aspirin, NSAIDs, and Glioma Risk: Original Data from the Glioma International Case-Control Study and a Meta-analysis. Cancer Epidemiol Biomarkers Prev. 2019 03; 28(3):555-562. PMID: 30482874; PMCID: PMC6401283.
      Citations: 7     Fields:    Translation:Humans
    31. Cachia D, Jalali A, Cykowski MD, Penas-Prado M, Langford LA, Li J, Shah K, Weinberg JS, Strickland BA. Spinal Anaplastic Oligodendroglioma With Oligodendrogliomatosis: Molecular Markers and Management: Case Report. Neurosurgery. 2016 Mar; 78(3):E466-73. PMID: 26352098.
      Citations: 1     Fields:    Translation:Humans
    32. Jalali A, Srinivasan VM, Chinnadurai P, Kan P, Arthur A, Duckworth EA. Two-color 3D-3D fusion of selective rotational cerebral angiograms: a novel approach to imaging in cerebrovascular neurosurgery. J Neurointerv Surg. 2016 Oct; 8(10):1056-60. PMID: 26574481.
      Citations: 7     Fields:    Translation:Humans
    33. Lan ZD, Tatsui CE, Jalali A, Humphries WE, Rilea K, Patel A, Ehni BL. Outcomes of a novel minimalist approach for the treatment of cubital tunnel syndrome. J Clin Neurosci. 2015 Jun; 22(6):964-8. PMID: 25800940.
      Citations: 1     Fields:    Translation:Humans
    34. Jalali A, Amirian ES, Bainbridge MN, Armstrong GN, Liu Y, Tsavachidis S, Jhangiani SN, Plon SE, Lau CC, Claus EB, Barnholtz-Sloan JS, Il'yasova D, Schildkraut J, Ali-Osman F, Sadetzki S, Johansen C, Houlston RS, Jenkins RB, Lachance D, Olson SH, Bernstein JL, Merrell RT, Wrensch MR, Davis FG, Lai R, Shete S, Aldape K, Amos CI, Muzny DM, Gibbs RA, Bondy ML, Melin BS. Targeted sequencing in chromosome 17q linkage region identifies familial glioma candidates in the Gliogene Consortium. Sci Rep. 2015 Feb 05; 5:8278. PMID: 25652157; PMCID: PMC4317686.
      Citations: 6     Fields:    Translation:HumansCells
    35. Bainbridge MN, Armstrong GN, Gramatges MM, Bertuch AA, Jhangiani SN, Doddapaneni H, Lewis L, Tombrello J, Tsavachidis S, Liu Y, Jalali A, Plon SE, Lau CC, Parsons DW, Claus EB, Barnholtz-Sloan J, Il'yasova D, Schildkraut J, Ali-Osman F, Sadetzki S, Johansen C, Houlston RS, Jenkins RB, Lachance D, Olson SH, Bernstein JL, Merrell RT, Wrensch MR, Walsh KM, Davis FG, Lai R, Shete S, Aldape K, Amos CI, Thompson PA, Muzny DM, Gibbs RA, Melin BS, Bondy ML, Gliogene Consortium. Germline mutations in shelterin complex genes are associated with familial glioma. J Natl Cancer Inst. 2015 Jan; 107(1):384. PMID: 25482530; PMCID: PMC4296199.
      Citations: 101     Fields:    Translation:HumansCells
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