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MATTHEW ROTH

TitleAssociate Professor
InstitutionBaylor College of Medicine
DepartmentDepartment of Molecular & Human Genetics
DivisionMolecular & Human Genetics
AddressOne Baylor Plaza, 400D
Houston TX 77030
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    Collapse keywords
    exosomes
    extracellular RNA
    epigenetics
    genomics
    bioinformatics


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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Onuchic V, Hartmaier RJ, Boone DN, Samuels ML, Patel RY, White WM, Garovic VD, Oesterreich S, Roth ME, Lee AV, Milosavljevic A. Epigenomic Deconvolution of Breast Tumors Reveals Metabolic Coupling between Constituent Cell Types. Cell Rep. 2016 Nov 15; 17(8):2075-2086. PMID: 27851969.
      View in: PubMed
    2. Cheung KH, Keerthikumar S, Roncaglia P, Subramanian SL, Roth ME, Samuel M, Anand S, Gangoda L, Gould S, Alexander R, Galas D, Gerstein MB, Hill AF, Kitchen RR, Lötvall J, Patel T, Procaccini DC, Quesenberry P, Rozowsky J, Raffai RL, Shypitsyna A, Su AI, Théry C, Vickers K, Wauben MH, Mathivanan S, Milosavljevic A, Laurent LC. Extending gene ontology in the context of extracellular RNA and vesicle communication. J Biomed Semantics. 2016; 7:19. PMID: 27076901; PMCID: PMC4830068.
    3. Subramanian SL, Kitchen RR, Alexander R, Carter BS, Cheung KH, Laurent LC, Pico A, Roberts LR, Roth ME, Rozowsky JS, Su AI, Gerstein MB, Milosavljevic A. Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies. J Extracell Vesicles. 2015; 4:27497. PMID: 26320941.
      View in: PubMed
    4. Bindra RS, Schaffer PJ, Meng A, Woo J, Måseide K, Roth ME, Lizardi P, Hedley DW, Bristow RG, Glazer PM. Alterations in DNA repair gene expression under hypoxia: elucidating the mechanisms of hypoxia-induced genetic instability. Ann N Y Acad Sci. 2005 Nov; 1059:184-95. PMID: 16382054.
      View in: PubMed
    5. Bindra RS, Schaffer PJ, Meng A, Woo J, Måseide K, Roth ME, Lizardi P, Hedley DW, Bristow RG, Glazer PM. Down-regulation of Rad51 and decreased homologous recombination in hypoxic cancer cells. Mol Cell Biol. 2004 Oct; 24(19):8504-18. PMID: 15367671; PMCID: PMC516750.
    6. Roth ME, Feng L, McConnell KJ, Schaffer PJ, Guerra CE, Affourtit JP, Piper KR, Guccione L, Hariharan J, Ford MJ, Powell SW, Krishnaswamy H, Lane J, Guccione L, Intrieri G, Merkel JS, Perbost C, Valerio A, Zolla B, Graham CD, Hnath J, Michaelson C, Wang R, Ying B, Halling C, Parman CE, Raha D, Orr B, Jedrzkiewicz B, Liao J, Tevelev A, Mattessich MJ, Kranz DM, Lacey M, Kaufman JC, Kim J, Latimer DR, Lizardi PM. Expression profiling using a hexamer-based universal microarray. Nat Biotechnol. 2004 Apr; 22(4):418-26. PMID: 15024387.
      View in: PubMed
    7. Goodwin B, Jones SA, Price RR, Watson MA, McKee DD, Moore LB, Galardi C, Wilson JG, Lewis MC, Roth ME, Maloney PR, Willson TM, Kliewer SA. A regulatory cascade of the nuclear receptors FXR, SHP-1, and LRH-1 represses bile acid biosynthesis. Mol Cell. 2000 Sep; 6(3):517-26. PMID: 11030332.
      View in: PubMed
    8. Shimkets RA, Lowe DG, Tai JT, Sehl P, Jin H, Yang R, Predki PF, Rothberg BE, Murtha MT, Roth ME, Shenoy SG, Windemuth A, Simpson JW, Simons JF, Daley MP, Gold SA, McKenna MP, Hillan K, Went GT, Rothberg JM. Gene expression analysis by transcript profiling coupled to a gene database query. Nat Biotechnol. 1999 Aug; 17(8):798-803. PMID: 10429247.
      View in: PubMed
    9. Ma GT, Roth ME, Groskopf JC, Tsai FY, Orkin SH, Grosveld F, Engel JD, Linzer DI. GATA-2 and GATA-3 regulate trophoblast-specific gene expression in vivo. Development. 1997 Feb; 124(4):907-14. PMID: 9043071.
      View in: PubMed
    10. Pandolfi PP, Roth ME, Karis A, Leonard MW, Dzierzak E, Grosveld FG, Engel JD, Lindenbaum MH. Targeted disruption of the GATA3 gene causes severe abnormalities in the nervous system and in fetal liver haematopoiesis. Nat Genet. 1995 Sep; 11(1):40-4. PMID: 7550312.
      View in: PubMed
    11. George KM, Leonard MW, Roth ME, Lieuw KH, Kioussis D, Grosveld F, Engel JD. Embryonic expression and cloning of the murine GATA-3 gene. Development. 1994 Sep; 120(9):2673-86. PMID: 7956841.
      View in: PubMed
    12. Holman PO, Roth ME, Huang M, Kranz DM. Characterization of transcripts from unrearranged V alpha 8 genes in the thymus. J Immunol. 1993 Aug 15; 151(4):1959-67. PMID: 8393896.
      View in: PubMed
    13. Roth ME, Tjoa BA, Schlueter CJ, Wilson ER, Lunn BC, Kranz DM. Sequence diversity of T cell receptor alpha chain transcripts from BALB/c thymus. Mol Immunol. 1992 Dec; 29(12):1447-55. PMID: 1280758.
      View in: PubMed
    14. Holman PO, Lacy MJ, Roth ME, Kranz DM. Mechanisms that generate junctional diversity in alpha and delta chains that use the Tcrd-V3 gene product. Immunogenetics. 1992; 35(1):33-40. PMID: 1309508.
      View in: PubMed
    15. Roth ME, Holman PO, Kranz DM. Nonrandom use of J alpha gene segments. Influence of V alpha and J alpha gene location. J Immunol. 1991 Aug 1; 147(3):1075-81. PMID: 1907305.
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    16. Roth ME, Lacy MJ, McNeil LK, Kranz DM. Correction: selection of variable-joining region combinations in the T cell receptor. Science. 1989 Sep 8; 245(4922):1032. PMID: 2528208.
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    17. Roth ME, Lacy MJ, McNeil LK, Kranz DM. Analysis of T cell receptor transcripts using the polymerase chain reaction. Biotechniques. 1989 Jul-Aug; 7(7):746-54. PMID: 2631785.
      View in: PubMed
    18. Lacy MJ, McNeil LK, Roth ME, Kranz DM. T-cell receptor delta-chain diversity in peripheral lymphocytes. Proc Natl Acad Sci U S A. 1989 Feb; 86(3):1023-6. PMID: 2783779; PMCID: PMC286613.
    19. Roth ME, Lacy MJ, McNeil LK, Kranz DM. Selection of variable-joining region combinations in the alpha chain of the T cell receptor. Science. 1988 Sep 9; 241(4871):1354-8. PMID: 2970673.
      View in: PubMed
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