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MATTHEW ROTH

TitleAssociate Professor
InstitutionBaylor College of Medicine
DepartmentDepartment of Molecular & Human Genetics
AddressOne Baylor Plaza
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. LaPlante EL, St?rchler A, Fullem R, Chen D, Starner AC, Esquivel E, Alsop E, Jackson AR, Ghiran I, Pereira G, Rozowsky J, Chang J, Gerstein MB, Alexander RP, Roth ME, Franklin JL, Coffey RJ, Raffai RL, Mansuy IM, Stavrakis S, deMello AJ, Laurent LC, Wang YT, Tsai CF, Liu T, Jones J, Van Keuren-Jensen K, Van Nostrand E, Mateescu B, Milosavljevic A. exRNA-eCLIP intersection analysis reveals a map of extracellular RNA binding proteins and associated RNAs across major human biofluids and carriers. Cell Genom. 2023 May 10; 3(5):100303. PMID: 37228754; PMCID: PMC10203258.
      Citations: 4     
    2. Lucero R, Zappulli V, Sammarco A, Murillo OD, Cheah PS, Srinivasan S, Tai E, Ting DT, Wei Z, Roth ME, Laurent LC, Krichevsky AM, Breakefield XO, Milosavljevic A. Glioma-Derived miRNA-Containing Extracellular Vesicles Induce Angiogenesis by Reprogramming Brain Endothelial Cells. Cell Rep. 2020 02 18; 30(7):2065-2074.e4. PMID: 32075753; PMCID: PMC7148092.
      Citations: 47     Fields:    Translation:HumansCells
    3. Das S, Extracellular RNA Communication Consortium, Ansel KM, Bitzer M, Charest A, Galas DJ, Gerstein MB, Gupta M, Milosavljevic A, McManus MT, Patel T, Raffai RL, Rozowsky J, Roth ME, Saugstad JA, Van Keuren-Jensen K, Weaver AM, Laurent LC, Breakefield XO. The Extracellular RNA Communication Consortium: Establishing Foundational Knowledge and Technologies for Extracellular RNA Research. Cell. 2019 04 04; 177(2):231-242. PMID: 30951667; PMCID: PMC6601620.
      Citations: 72     Fields:    Translation:HumansCells
    4. Murillo OD, Thistlethwaite W, Rozowsky J, Subramanian SL, Lucero R, Shah N, Jackson AR, Srinivasan S, Chung A, Laurent CD, Kitchen RR, Galeev T, Warrell J, Diao JA, Welsh JA, Hanspers K, Riutta A, Burgstaller-Muehlbacher S, Shah RV, Yeri A, Jenkins LM, Ahsen ME, Cordon-Cardo C, Dogra N, Gifford SM, Smith JT, Stolovitzky G, Tewari AK, Wunsch BH, Yadav KK, Danielson KM, Filant J, Moeller C, Nejad P, Paul A, Simonson B, Wong DK, Zhang X, Balaj L, Gandhi R, Sood AK, Alexander RP, Wang L, Wu C, Wong DTW, Galas DJ, Van Keuren-Jensen K, Patel T, Jones JC, Das S, Cheung KH, Pico AR, Su AI, Raffai RL, Laurent LC, Roth ME, Gerstein MB, Milosavljevic A. exRNA Atlas Analysis Reveals Distinct Extracellular RNA Cargo Types and Their Carriers Present across Human Biofluids. Cell. 2019 04 04; 177(2):463-477.e15. PMID: 30951672; PMCID: PMC6616370.
      Citations: 94     Fields:    Translation:HumansCells
    5. Onuchic V, Hartmaier RJ, Boone DN, Samuels ML, Patel RY, White WM, Garovic VD, Oesterreich S, Roth ME, Lee AV, Milosavljevic A. Epigenomic Deconvolution of Breast Tumors Reveals Metabolic Coupling between Constituent Cell Types. Cell Rep. 2016 11 15; 17(8):2075-2086. PMID: 27851969; PMCID: PMC5115176.
      Citations: 33     Fields:    Translation:HumansCells
    6. Cheung KH, Keerthikumar S, Roncaglia P, Subramanian SL, Roth ME, Samuel M, Anand S, Gangoda L, Gould S, Alexander R, Galas D, Gerstein MB, Hill AF, Kitchen RR, Patel T, Procaccini DC, Quesenberry P, Rozowsky J, Raffai RL, Shypitsyna A, Su AI, Vickers K, Wauben MH, Mathivanan S, Milosavljevic A, Laurent LC, L?tvall J, Th?ry C. Extending gene ontology in the context of extracellular RNA and vesicle communication. J Biomed Semantics. 2016; 7:19. PMID: 27076901; PMCID: PMC4830068.
      Citations: 14     Fields:    Translation:HumansCells
    7. Subramanian SL, Kitchen RR, Alexander R, Carter BS, Cheung KH, Laurent LC, Pico A, Roberts LR, Roth ME, Rozowsky JS, Su AI, Gerstein MB, Milosavljevic A. Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies. J Extracell Vesicles. 2015; 4:27497. PMID: 26320941; PMCID: PMC4553261.
      Citations: 28     Fields:    
    8. Bindra RS, Schaffer PJ, Meng A, Woo J, Roth ME, Lizardi P, Hedley DW, Bristow RG, Glazer PM, M?seide K. Alterations in DNA repair gene expression under hypoxia: elucidating the mechanisms of hypoxia-induced genetic instability. Ann N Y Acad Sci. 2005 Nov; 1059:184-95. PMID: 16382054.
      Citations: 30     Fields:    Translation:HumansCells
    9. Bindra RS, Schaffer PJ, Meng A, Woo J, Roth ME, Lizardi P, Hedley DW, Bristow RG, Glazer PM, M?seide K. Down-regulation of Rad51 and decreased homologous recombination in hypoxic cancer cells. Mol Cell Biol. 2004 Oct; 24(19):8504-18. PMID: 15367671; PMCID: PMC516750.
      Citations: 154     Fields:    Translation:HumansCells
    10. Roth ME, Feng L, McConnell KJ, Schaffer PJ, Guerra CE, Affourtit JP, Piper KR, Guccione L, Hariharan J, Ford MJ, Powell SW, Krishnaswamy H, Lane J, Guccione L, Intrieri G, Merkel JS, Perbost C, Valerio A, Zolla B, Graham CD, Hnath J, Michaelson C, Wang R, Ying B, Halling C, Parman CE, Raha D, Orr B, Jedrzkiewicz B, Liao J, Tevelev A, Mattessich MJ, Kranz DM, Lacey M, Kaufman JC, Kim J, Latimer DR, Lizardi PM. Expression profiling using a hexamer-based universal microarray. Nat Biotechnol. 2004 Apr; 22(4):418-26. PMID: 15024387.
      Citations: 10     Fields:    Translation:HumansAnimalsCells
    11. Goodwin B, Jones SA, Price RR, Watson MA, McKee DD, Moore LB, Galardi C, Wilson JG, Lewis MC, Roth ME, Maloney PR, Willson TM, Kliewer SA. A regulatory cascade of the nuclear receptors FXR, SHP-1, and LRH-1 represses bile acid biosynthesis. Mol Cell. 2000 Sep; 6(3):517-26. PMID: 11030332.
      Citations: 654     Fields:    Translation:HumansAnimalsCells
    12. Shimkets RA, Lowe DG, Tai JT, Sehl P, Jin H, Yang R, Predki PF, Rothberg BE, Murtha MT, Roth ME, Shenoy SG, Windemuth A, Simpson JW, Simons JF, Daley MP, Gold SA, McKenna MP, Hillan K, Went GT, Rothberg JM. Gene expression analysis by transcript profiling coupled to a gene database query. Nat Biotechnol. 1999 Aug; 17(8):798-803. PMID: 10429247.
      Citations: 36     Fields:    Translation:HumansAnimalsCells
    13. Ma GT, Roth ME, Groskopf JC, Tsai FY, Orkin SH, Grosveld F, Engel JD, Linzer DI. GATA-2 and GATA-3 regulate trophoblast-specific gene expression in vivo. Development. 1997 Feb; 124(4):907-14. PMID: 9043071.
      Citations: 62     Fields:    Translation:AnimalsCells
    14. Pandolfi PP, Roth ME, Karis A, Leonard MW, Dzierzak E, Grosveld FG, Engel JD, Lindenbaum MH. Targeted disruption of the GATA3 gene causes severe abnormalities in the nervous system and in fetal liver haematopoiesis. Nat Genet. 1995 Sep; 11(1):40-4. PMID: 7550312.
      Citations: 172     Fields:    Translation:AnimalsCells
    15. George KM, Leonard MW, Roth ME, Lieuw KH, Kioussis D, Grosveld F, Engel JD. Embryonic expression and cloning of the murine GATA-3 gene. Development. 1994 Sep; 120(9):2673-86. PMID: 7956841.
      Citations: 72     Fields:    Translation:AnimalsCells
    16. Holman PO, Roth ME, Huang M, Kranz DM. Characterization of transcripts from unrearranged V alpha 8 genes in the thymus. J Immunol. 1993 Aug 15; 151(4):1959-67. PMID: 8393896.
      Citations: 1     Fields:    Translation:AnimalsCells
    17. Roth ME, Tjoa BA, Schlueter CJ, Wilson ER, Lunn BC, Kranz DM. Sequence diversity of T cell receptor alpha chain transcripts from BALB/c thymus. Mol Immunol. 1992 Dec; 29(12):1447-55. PMID: 1280758.
      Citations: 1     Fields:    Translation:AnimalsCells
    18. Holman PO, Lacy MJ, Roth ME, Kranz DM. Mechanisms that generate junctional diversity in alpha and delta chains that use the Tcrd-V3 gene product. Immunogenetics. 1992; 35(1):33-40. PMID: 1309508.
      Citations:    Fields:    Translation:AnimalsCells
    19. Roth ME, Holman PO, Kranz DM. Nonrandom use of J alpha gene segments. Influence of V alpha and J alpha gene location. J Immunol. 1991 Aug 01; 147(3):1075-81. PMID: 1907305.
      Citations: 14     Fields:    Translation:AnimalsCells
    20. Roth ME, Lacy MJ, McNeil LK, Kranz DM. Correction: selection of variable-joining region combinations in the T cell receptor. Science. 1989 Sep 08; 245(4922):1032. PMID: 2528208.
      Citations: 2     Fields:    Translation:AnimalsCells
    21. Roth ME, Lacy MJ, McNeil LK, Kranz DM. Analysis of T cell receptor transcripts using the polymerase chain reaction. Biotechniques. 1989 Jul-Aug; 7(7):746-54. PMID: 2631785.
      Citations: 2     Fields:    Translation:AnimalsCells
    22. Lacy MJ, McNeil LK, Roth ME, Kranz DM. T-cell receptor delta-chain diversity in peripheral lymphocytes. Proc Natl Acad Sci U S A. 1989 Feb; 86(3):1023-6. PMID: 2783779; PMCID: PMC286613.
      Citations: 9     Fields:    Translation:AnimalsCells
    23. Roth ME, Lacy MJ, McNeil LK, Kranz DM. Selection of variable-joining region combinations in the alpha chain of the T cell receptor. Science. 1988 Sep 09; 241(4871):1354-8. PMID: 2970673.
      Citations: 11     Fields:    Translation:AnimalsCells
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