CHAO CHENG to Binding Sites
This is a "connection" page, showing publications CHAO CHENG has written about Binding Sites.
Connection Strength
0.907
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Computational modeling of chromatin accessibility identified important epigenomic regulators. BMC Genomics. 2022 Jan 08; 23(1):19.
Score: 0.149
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Regulators associated with clinical outcomes revealed by DNA methylation data in breast cancer. PLoS Comput Biol. 2015 May; 11(5):e1004269.
Score: 0.094
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DPRP: a database of phenotype-specific regulatory programs derived from transcription factor binding data. Nucleic Acids Res. 2014 Jan; 42(Database issue):D178-83.
Score: 0.085
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An integrated encyclopedia of DNA elements in the human genome. Nature. 2012 Sep 06; 489(7414):57-74.
Score: 0.078
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Understanding transcriptional regulation by integrative analysis of transcription factor binding data. Genome Res. 2012 Sep; 22(9):1658-67.
Score: 0.078
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Genome-wide analysis of chromatin features identifies histone modification sensitive and insensitive yeast transcription factors. Genome Biol. 2011 Nov 07; 12(11):R111.
Score: 0.074
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TIP: a probabilistic method for identifying transcription factor target genes from ChIP-seq binding profiles. Bioinformatics. 2011 Dec 01; 27(23):3221-7.
Score: 0.074
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Modeling the relative relationship of transcription factor binding and histone modifications to gene expression levels in mouse embryonic stem cells. Nucleic Acids Res. 2012 Jan; 40(2):553-68.
Score: 0.073
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Inferring activity changes of transcription factors by binding association with sorted expression profiles. BMC Bioinformatics. 2007 Nov 16; 8:452.
Score: 0.056
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Complex Patterns of Association between Pleiotropy and Transcription Factor Evolution. Genome Biol Evol. 2016 10 23; 8(10):3159-3170.
Score: 0.026
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A deep learning framework for modeling structural features of RNA-binding protein targets. Nucleic Acids Res. 2016 Feb 29; 44(4):e32.
Score: 0.024
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Comparative analysis of regulatory information and circuits across distant species. Nature. 2014 Aug 28; 512(7515):453-6.
Score: 0.022
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A comprehensive nuclear receptor network for breast cancer cells. Cell Rep. 2013 Feb 21; 3(2):538-51.
Score: 0.020
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Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors. Genome Biol. 2012 Sep 26; 13(9):R48.
Score: 0.020
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Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans. Genome Res. 2011 Feb; 21(2):245-54.
Score: 0.017
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Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data. Genome Res. 2011 Feb; 21(2):276-85.
Score: 0.017