ZHANDONG LIU to Computational Biology
This is a "connection" page, showing publications ZHANDONG LIU has written about Computational Biology.
Connection Strength
3.670
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Unravelling spatial gene associations with SEAGAL: a Python package for spatial transcriptomics data analysis and visualization. Bioinformatics. 2023 07 01; 39(7).
Score: 0.611
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A benchmark for RNA-seq deconvolution analysis under dynamic testing environments. Genome Biol. 2021 04 12; 22(1):102.
Score: 0.524
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Using MARRVEL v1.2 for Bioinformatics Analysis of Human Genes and Variant Pathogenicity. Curr Protoc Bioinformatics. 2019 09; 67(1):e85.
Score: 0.469
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Beta-binomial modeling of CRISPR pooled screen data identifies target genes with greater sensitivity and fewer false negatives. Genome Res. 2019 Jun; 29(6):999-1008.
Score: 0.457
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CRISPRcloud: a secure cloud-based pipeline for CRISPR pooled screen deconvolution. Bioinformatics. 2017 Sep 15; 33(18):2963-2965.
Score: 0.409
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Molecular pathway identification using biological network-regularized logistic models. BMC Genomics. 2013; 14 Suppl 8:S7.
Score: 0.315
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A Local Poisson Graphical Model for inferring networks from sequencing data. IEEE Trans Nanobioscience. 2013 Sep; 12(3):189-98.
Score: 0.308
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Singular value decomposition-based regression identifies activation of endogenous signaling pathways in vivo. Genome Biol. 2008; 9(12):R180.
Score: 0.223
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Coexpression enrichment analysis at the single-cell level reveals convergent defects in neural progenitor cells and their cell-type transitions in neurodevelopmental disorders. Genome Res. 2020 06; 30(6):835-848.
Score: 0.124
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Disease-related gene module detection based on a multi-label propagation clustering algorithm. PLoS One. 2017; 12(5):e0178006.
Score: 0.100
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Sequence space coverage, entropy of genomes and the potential to detect non-human DNA in human samples. BMC Genomics. 2008 Oct 30; 9:509.
Score: 0.055
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An ultra-fast and scalable quantification pipeline for transposable elements from next generation sequencing data. Pac Symp Biocomput. 2018; 23:168-179.
Score: 0.026
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Extensive cryptic splicing upon loss of RBM17 and TDP43 in neurodegeneration models. Hum Mol Genet. 2016 12 01; 25(23):5083-5093.
Score: 0.024
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Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease. Alzheimers Dement. 2016 06; 12(6):645-53.
Score: 0.023