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Zulkar Nain

TitleGraduate Student
InstitutionBaylor College of Medicine
DepartmentChemical, Physical & Structural Biology
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Alam R, Samad A, Ahammad F, Nur SM, Alsaiari AA, Imon RR, Talukder MEK, Nain Z, Rahman MM, Mohammad F, Karpinski TM. In silico formulation of a next-generation multiepitope vaccine for use as a prophylactic candidate against Crimean-Congo hemorrhagic fever. BMC Med. 2023 02 01; 21(1):36. PMID: 36726141; PMCID: PMC9891764.
      Citations: 2     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    2. Samad A, Meghla NS, Nain Z, Karpinski TM, Rahman MS. Immune epitopes identification and designing of a multi-epitope vaccine against bovine leukemia virus: a molecular dynamics and immune simulation approaches. Cancer Immunol Immunother. 2022 Oct; 71(10):2535-2548. PMID: 35294591; PMCID: PMC8924353.
      Citations:    Fields:    
    3. Nain Z, Barman SK, Sheam MM, Syed SB, Samad A, Quinn JMW, Karim MM, Himel MK, Roy RK, Moni MA, Biswas SK. Transcriptomic studies revealed pathophysiological impact of COVID-19 to predominant health conditions. Brief Bioinform. 2021 11 05; 22(6). PMID: 34076249; PMCID: PMC8194991.
      Citations: 3     Fields:    Translation:HumansCells
    4. Pokhrel S, Bouback TA, Samad A, Nur SM, Alam R, Abdullah-Al-Mamun M, Nain Z, Imon RR, Talukder MEK, Tareq MMI, Hossen MS, Karpinski TM, Ahammad F, Qadri I, Rahman MS. Spike protein recognizer receptor ACE2 targeted identification of potential natural antiviral drug candidates against SARS-CoV-2. Int J Biol Macromol. 2021 Nov 30; 191:1114-1125. PMID: 34592225; PMCID: PMC8474879.
      Citations: 6     Fields:    Translation:HumansCells
    5. Islam MB, Chowdhury UN, Nain Z, Uddin S, Ahmed MB, Moni MA. Identifying molecular insight of synergistic complexities for SARS-CoV-2 infection with pre-existing type 2 diabetes. Comput Biol Med. 2021 09; 136:104668. PMID: 34340124; PMCID: PMC8299293.
      Citations: 2     Fields:    Translation:HumansCells
    6. Abdulla F, Nain Z, Karimuzzaman M, Hossain MM, Rahman A. A Non-Linear Biostatistical Graphical Modeling of Preventive Actions and Healthcare Factors in Controlling COVID-19 Pandemic. Int J Environ Res Public Health. 2021 04 23; 18(9). PMID: 33922634; PMCID: PMC8122857.
      Citations: 5     Fields:    Translation:HumansCellsPHPublic Health
    7. Nain Z, Rana HK, Islam SMS, Summers MA, Moni MA, Li? P. Pathogenetic profiling of COVID-19 and SARS-like viruses. Brief Bioinform. 2021 03 22; 22(2):1175-1196. PMID: 32778874; PMCID: PMC7454314.
      Citations: 13     Fields:    Translation:HumansCells
    8. Rakib A, Nain Z, Sami SA, Mahmud S, Islam A, Ahmed S, Siddiqui ABF, Babu SMOF, Hossain P, Shahriar A, Nainu F, Emran TB, Simal-Gandara J. A molecular modelling approach for identifying antiviral selenium-containing heterocyclic compounds that inhibit the main protease of SARS-CoV-2: an in silico investigation. Brief Bioinform. 2021 03 22; 22(2):1476-1498. PMID: 33623995; PMCID: PMC7929402.
      Citations: 27     Fields:    Translation:HumansCells
    9. Nain Z, Mansur FJ, Syed SB, Islam MA, Azakami H, Islam MR, Karim MM. Inhibition of biofilm formation, quorum sensing and other virulence factors in Pseudomonas aeruginosa by polyphenols of Gynura procumbens leaves. J Biomol Struct Dyn. 2022 08; 40(12):5357-5371. PMID: 33403919.
      Citations: 1     Fields:    Translation:Cells
    10. Khan MSA, Nain Z, Syed SB, Abdulla F, Moni MA, Sheam MM, Karim MM, Adhikari UK. Computational formulation and immune dynamics of a multi-peptide vaccine candidate against Crimean-Congo hemorrhagic fever virus. Mol Cell Probes. 2021 02; 55:101693. PMID: 33388416.
      Citations: 5     Fields:    Translation:HumansCells
    11. Abdulla F, Nain Z, Hossain MM, Syed SB, Ahmed Khan MS, Adhikari UK. A comprehensive screening of the whole proteome of hantavirus and designing a multi-epitope subunit vaccine for cross-protection against hantavirus: Structural vaccinology and immunoinformatics study. Microb Pathog. 2021 Jan; 150:104705. PMID: 33352214.
      Citations: 6     Fields:    Translation:HumansCells
    12. Barman NC, Khan NM, Islam M, Nain Z, Roy RK, Haque A, Barman SK. CRISPR-Cas9: A Promising Genome Editing Therapeutic Tool for Alzheimer's Disease-A Narrative Review. Neurol Ther. 2020 Dec; 9(2):419-434. PMID: 33089409; PMCID: PMC7606404.
      Citations: 9     
    13. Samad A, Haque F, Nain Z, Alam R, Al Noman MA, Rahman Molla MH, Hossen MS, Islam MR, Khan MI, Ahammad F. Computational assessment of MCM2 transcriptional expression and identification of the prognostic biomarker for human breast cancer. Heliyon. 2020 Oct; 6(10):e05087. PMID: 33024849; PMCID: PMC7530310.
      Citations: 7     
    14. Sheam MM, Syed SB, Nain Z, Tang SS, Paul DK, Ahmed KR, Biswas SK. Community-acquired pneumonia: aetiology, antibiotic resistance and prospects of phage therapy. J Chemother. 2020 Dec; 32(8):395-410. PMID: 32820711.
      Citations: 2     Fields:    Translation:Humans
    15. Samad A, Ahammad F, Nain Z, Alam R, Imon RR, Hasan M, Rahman MS. Designing a multi-epitope vaccine against SARS-CoV-2: an immunoinformatics approach. J Biomol Struct Dyn. 2022 Jan; 40(1):14-30. PMID: 32677533; PMCID: PMC7441805.
      Citations: 36     Fields:    Translation:HumansCells
    16. Mahmud S, Rahman E, Nain Z, Billah M, Karmakar S, Mohanto SC, Paul GK, Amin A, Acharjee UK, Saleh MA. Computational discovery of plant-based inhibitors against human carbonic anhydrase IX and molecular dynamics simulation. J Biomol Struct Dyn. 2021 May; 39(8):2754-2770. PMID: 32266872.
      Citations: 6     Fields:    Translation:HumansCells
    17. Nain Z, Karim MM, Sen MK, Adhikari UK. Structural basis and designing of peptide vaccine using PE-PGRS family protein of Mycobacterium ulcerans-An integrated vaccinomics approach. Mol Immunol. 2020 04; 120:146-163. PMID: 32126449.
      Citations: 24     Fields:    Translation:HumansCells
    18. Sayed SB, Nain Z, Khan MSA, Abdulla F, Tasmin R, Adhikari UK. Exploring Lassa Virus Proteome to Design a Multi-epitope Vaccine Through Immunoinformatics and Immune Simulation Analyses. Int J Pept Res Ther. 2020; 26(4):2089-2107. PMID: 32421065; PMCID: PMC7223894.
      Citations: 17     
    19. Nain Z, Adhikari UK, Abdulla F, Hossain N, Barman NC, Mansur FJ, Azakami H, Karim MM. Computational prediction of active sites and ligands in different AHL quorum quenching lactonases and acylases. J Biosci. 2020; 45. PMID: 32020908.
      Citations:    Fields:    
    20. Nain Z, Sayed SB, Karim MM, Islam MA, Adhikari UK. Energy-optimized pharmacophore coupled virtual screening in the discovery of quorum sensing inhibitors of LasR protein of Pseudomonas aeruginosa. J Biomol Struct Dyn. 2020 Nov; 38(18):5374-5388. PMID: 31787031.
      Citations: 3     Fields:    Translation:Cells
    21. Nain Z, Abdulla F, Rahman MM, Karim MM, Khan MSA, Sayed SB, Mahmud S, Rahman SMR, Sheam MM, Haque Z, Adhikari UK. Proteome-wide screening for designing a multi-epitope vaccine against emerging pathogen Elizabethkingia anophelis using immunoinformatic approaches. J Biomol Struct Dyn. 2020 Oct; 38(16):4850-4867. PMID: 31709929.
      Citations: 34     Fields:    Translation:HumansCells
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