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SUSAN BERGET

TitleProfessor Emeritus
InstitutionBaylor College of Medicine
DepartmentDepartment of Biochemistry and Molecular Pharmacology
AddressOne Baylor Plaza
Houston, TX 77030
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    Collapse Research 
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    R01GM058019     (BERGET, SUSAN M)Jul 1, 1999 - Jun 30, 2005
    NIH
    REGULATION OF ALTERNATIVE PROCESSING OF CALCITONIN/CGRP
    Role: Principal Investigator
    R55CA070358     (BERGET, SUSAN M)Sep 6, 1996 - Sep 5, 1998
    NIH
    METASTATIC REGULATION OF DIFFERENTIAL SPLICING OF CD44
    Role: Principal Investigator
    R01HL044964     (BERGET, SUSAN M)Apr 1, 1991 - Mar 31, 1994
    NIH
    PROCESSING OF HUMAN APOLIPOPROTEIN-B MRNA
    Role: Principal Investigator
    R01HG000220     (BERGET, SUSAN M)Jan 1, 1991 - Dec 31, 1996
    NIH
    EXON DETECTION IN VERTEBRATE DNA
    Role: Principal Investigator
    T32GM008231     (NELSON, DAVID LOREN)Jul 1, 1990 - Jun 30, 2020
    NIH
    Training Program in Cell and Molecular Biology
    Role: Co-Principal Investigator
    R01GM038526     (BERGET, SUSAN M)Apr 1, 1988 - Jul 31, 2007
    NIH
    Processing of Pre-Messenger RNA
    Role: Principal Investigator
    R01GM035670     (BERGET, SUSAN M)Mar 1, 1985 - Dec 31, 1989
    NIH
    TRANSCRIPTIONAL CONTROL BY SMALL RIBONUCLEOPROTEINS
    Role: Principal Investigator
    R01GM035669     (BERGET, SUSAN M)Mar 1, 1985 - Jun 30, 1987
    NIH
    CONTROL OF HOST GENE EXPRESSION BY ADENOVIRUS
    Role: Principal Investigator
    R01GM033897     (BERGET, SUSAN M)Jan 1, 1984 - Feb 28, 1985
    NIH
    CONTROL OF HOST GENE EXPRESSION BY ADENOVIRUS
    Role: Principal Investigator

    Collapse Bibliographic 
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Young JI, Hong EP, Castle JC, Crespo-Barreto J, Bowman AB, Rose MF, Kang D, Richman R, Johnson JM, Berget S, Zoghbi HY. Regulation of RNA splicing by the methylation-dependent transcriptional repressor methyl-CpG binding protein 2. Proc Natl Acad Sci U S A. 2005 Dec 06; 102(49):17551-8. PMID: 16251272; PMCID: PMC1266160.
      Citations: 196     Fields:    Translation:HumansAnimalsCells
    2. Dowhan DH, Dutertre M, Martin N, Berget SM, O'Malley BW, Auboeuf D. A subset of nuclear receptor coregulators act as coupling proteins during synthesis and maturation of RNA transcripts. Mol Cell Biol. 2005 Jul; 25(13):5307-16. PMID: 15964789; PMCID: PMC1156981.
      Citations: 39     Fields:    Translation:HumansAnimalsCells
    3. Dowhan DH, Hong EP, Auboeuf D, Dennis AP, Wilson MM, Berget SM, O'Malley BW. Steroid hormone receptor coactivation and alternative RNA splicing by U2AF65-related proteins CAPERalpha and CAPERbeta. Mol Cell. 2005 Feb 04; 17(3):429-39. PMID: 15694343.
      Citations: 91     Fields:    Translation:HumansAnimalsCells
    4. Auboeuf D, Dowhan DH, Kang YK, Larkin K, Lee JW, Berget SM, O'Malley BW. Differential recruitment of nuclear receptor coactivators may determine alternative RNA splice site choice in target genes. Proc Natl Acad Sci U S A. 2004 Feb 24; 101(8):2270-4. PMID: 14982999; PMCID: PMC356940.
      Citations: 53     Fields:    Translation:Cells
    5. Auboeuf D, Dowhan DH, Li X, Larkin K, Ko L, Berget SM, O'Malley BW. CoAA, a nuclear receptor coactivator protein at the interface of transcriptional coactivation and RNA splicing. Mol Cell Biol. 2004 Jan; 24(1):442-53. PMID: 14673176; PMCID: PMC303353.
      Citations: 79     Fields:    Translation:HumansCells
    6. Auboeuf D, Parker MM, O'Malley BW, Berget SM, H?nig A. Regulation of alternative splicing by the ATP-dependent DEAD-box RNA helicase p72. Mol Cell Biol. 2002 Aug; 22(16):5698-707. PMID: 12138182; PMCID: PMC133985.
      Citations: 61     Fields:    Translation:HumansCells
    7. Stickeler E, Fraser SD, Honig A, Chen AL, Berget SM, Cooper TA. The RNA binding protein YB-1 binds A/C-rich exon enhancers and stimulates splicing of the CD44 alternative exon v4. EMBO J. 2001 Jul 16; 20(14):3821-30. PMID: 11447123; PMCID: PMC125550.
      Citations: 79     Fields:    Translation:Cells
    8. McCullough AJ, Berget SM. An intronic splicing enhancer binds U1 snRNPs to enhance splicing and select 5' splice sites. Mol Cell Biol. 2000 Dec; 20(24):9225-35. PMID: 11094074; PMCID: PMC102180.
      Citations: 41     Fields:    Translation:HumansCells
    9. Berget SM, Moore C, Sharp PA. Spliced segments at the 5' terminus of adenovirus 2 late mRNA. 1977. Rev Med Virol. 2000 Nov-Dec; 10(6):356-62; discussion 355-6. PMID: 11114075.
      Citations: 4     Fields:    Translation:Cells
    10. Zeng C, Berget SM. Participation of the C-terminal domain of RNA polymerase II in exon definition during pre-mRNA splicing. Mol Cell Biol. 2000 Nov; 20(21):8290-301. PMID: 11027297; PMCID: PMC86437.
      Citations: 34     Fields:    Translation:AnimalsCells
    11. Carlo T, Sierra R, Berget SM. A 5' splice site-proximal enhancer binds SF1 and activates exon bridging of a microexon. Mol Cell Biol. 2000 Jun; 20(11):3988-95. PMID: 10805741; PMCID: PMC85762.
      Citations: 22     Fields:    Translation:HumansAnimalsCells
    12. Stickeler E, Kittrell F, Medina D, Berget SM. Stage-specific changes in SR splicing factors and alternative splicing in mammary tumorigenesis. Oncogene. 1999 Jun 17; 18(24):3574-82. PMID: 10380879.
      Citations: 54     Fields:    Translation:AnimalsCells
    13. Lou H, Helfman DM, Gagel RF, Berget SM. Polypyrimidine tract-binding protein positively regulates inclusion of an alternative 3'-terminal exon. Mol Cell Biol. 1999 Jan; 19(1):78-85. PMID: 9858533; PMCID: PMC83867.
      Citations: 71     Fields:    Translation:HumansAnimalsCells
    14. Lou H, Neugebauer KM, Gagel RF, Berget SM. Regulation of alternative polyadenylation by U1 snRNPs and SRp20. Mol Cell Biol. 1998 Sep; 18(9):4977-85. PMID: 9710581; PMCID: PMC109082.
      Citations: 94     Fields:    Translation:HumansAnimalsCells
    15. Kennedy CF, Berget SM, Kr?mer A. A role for SRp54 during intron bridging of small introns with pyrimidine tracts upstream of the branch point. Mol Cell Biol. 1998 Sep; 18(9):5425-34. PMID: 9710626; PMCID: PMC109127.
      Citations: 22     Fields:    Translation:HumansAnimalsCells
    16. Elrick LL, Humphrey MB, Cooper TA, Berget SM. A short sequence within two purine-rich enhancers determines 5' splice site specificity. Mol Cell Biol. 1998 Jan; 18(1):343-52. PMID: 9418881; PMCID: PMC121503.
      Citations: 18     Fields:    Translation:HumansAnimalsCells
    17. Wentz MP, Moore BE, Cloyd MW, Berget SM, Donehower LA. A naturally arising mutation of a potential silencer of exon splicing in human immunodeficiency virus type 1 induces dominant aberrant splicing and arrests virus production. J Virol. 1997 Nov; 71(11):8542-51. PMID: 9343212; PMCID: PMC192318.
      Citations: 29     Fields:    Translation:HumansCells
    18. McCullough AJ, Berget SM. G triplets located throughout a class of small vertebrate introns enforce intron borders and regulate splice site selection. Mol Cell Biol. 1997 Aug; 17(8):4562-71. PMID: 9234714; PMCID: PMC232310.
      Citations: 115     Fields:    Translation:HumansAnimalsCells
    19. Kennedy CF, Berget SM. Pyrimidine tracts between the 5' splice site and branch point facilitate splicing and recognition of a small Drosophila intron. Mol Cell Biol. 1997 May; 17(5):2774-80. PMID: 9111348; PMCID: PMC232128.
      Citations: 15     Fields:    Translation:AnimalsCells
    20. Zeng C, Kim E, Warren SL, Berget SM. Dynamic relocation of transcription and splicing factors dependent upon transcriptional activity. EMBO J. 1997 Mar 17; 16(6):1401-12. PMID: 9135155; PMCID: PMC1169737.
      Citations: 81     Fields:    Translation:HumansAnimalsCells
    21. Sterner DA, Carlo T, Berget SM. Architectural limits on split genes. Proc Natl Acad Sci U S A. 1996 Dec 24; 93(26):15081-5. PMID: 8986767; PMCID: PMC26359.
      Citations: 81     Fields:    Translation:AnimalsCells
    22. Carlo T, Sterner DA, Berget SM. An intron splicing enhancer containing a G-rich repeat facilitates inclusion of a vertebrate micro-exon. RNA. 1996 Apr; 2(4):342-53. PMID: 8634915; PMCID: PMC1369377.
      Citations: 50     Fields:    Translation:AnimalsCells
    23. Lou H, Gagel RF, Berget SM. An intron enhancer recognized by splicing factors activates polyadenylation. Genes Dev. 1996 Jan 15; 10(2):208-19. PMID: 8566754.
      Citations: 63     Fields:    Translation:HumansAnimalsCells
    24. Lou H, Yang Y, Cote GJ, Berget SM, Gagel RF. An intron enhancer containing a 5' splice site sequence in the human calcitonin/calcitonin gene-related peptide gene. Mol Cell Biol. 1995 Dec; 15(12):7135-42. PMID: 8524281; PMCID: PMC230969.
      Citations: 33     Fields:    Translation:HumansAnimalsCells
    25. Humphrey MB, Bryan J, Cooper TA, Berget SM. A 32-nucleotide exon-splicing enhancer regulates usage of competing 5' splice sites in a differential internal exon. Mol Cell Biol. 1995 Aug; 15(8):3979-88. PMID: 7623794; PMCID: PMC230637.
      Citations: 42     Fields:    Translation:HumansCells
    26. Berget SM. Exon recognition in vertebrate splicing. J Biol Chem. 1995 Feb 10; 270(6):2411-4. PMID: 7852296.
      Citations: 436     Fields:    Translation:AnimalsCells
    27. Talerico M, Berget SM. Intron definition in splicing of small Drosophila introns. Mol Cell Biol. 1994 May; 14(5):3434-45. PMID: 8164690; PMCID: PMC358708.
      Citations: 62     Fields:    Translation:AnimalsCells
    28. Zeng C, He D, Berget SM, Brinkley BR. Nuclear-mitotic apparatus protein: a structural protein interface between the nucleoskeleton and RNA splicing. Proc Natl Acad Sci U S A. 1994 Feb 15; 91(4):1505-9. PMID: 8108437; PMCID: PMC43188.
      Citations: 20     Fields:    Translation:HumansCells
    29. Krizman DB, Berget SM. Efficient selection of 3'-terminal exons from vertebrate DNA. Nucleic Acids Res. 1993 Nov 11; 21(22):5198-202. PMID: 8255777; PMCID: PMC310637.
      Citations: 15     Fields:    Translation:HumansAnimalsCells
    30. Sterner DA, Berget SM. In vivo recognition of a vertebrate mini-exon as an exon-intron-exon unit. Mol Cell Biol. 1993 May; 13(5):2677-87. PMID: 7682652; PMCID: PMC359639.
      Citations: 34     Fields:    Translation:HumansAnimalsCells
    31. Niwa M, MacDonald CC, Berget SM. Are vertebrate exons scanned during splice-site selection? Nature. 1992 Nov 19; 360(6401):277-80. PMID: 1359430.
      Citations: 55     Fields:    Translation:HumansCells
    32. Cote GJ, Stolow DT, Peleg S, Berget SM, Gagel RF. Identification of exon sequences and an exon binding protein involved in alternative RNA splicing of calcitonin/CGRP. Nucleic Acids Res. 1992 May 11; 20(9):2361-6. PMID: 1594453; PMCID: PMC312354.
      Citations: 21     Fields:    Translation:HumansCells
    33. Niwa M, Berget SM. Mutation of the AAUAAA polyadenylation signal depresses in vitro splicing of proximal but not distal introns. Genes Dev. 1991 Nov; 5(11):2086-95. PMID: 1657710.
      Citations: 103     Fields:    Translation:Cells
    34. Cote GJ, Nguyen IN, Lips CJ, Berget SM, Gagel RF. Validation of an in vitro RNA processing system for CT/CGRP precursor mRNA. Nucleic Acids Res. 1991 Jul 11; 19(13):3601-6. PMID: 1649451; PMCID: PMC328385.
      Citations: 8     Fields:    Translation:Cells
    35. Niwa M, Berget SM. Polyadenylation precedes splicing in vitro. Gene Expr. 1991 Apr; 1(1):5-14. PMID: 1726467; PMCID: PMC5952195.
      Citations: 11     Fields:    Translation:Cells
    36. Stolow DT, Berget SM. Identification of nuclear proteins that specifically bind to RNAs containing 5' splice sites. Proc Natl Acad Sci U S A. 1991 Jan 15; 88(2):320-4. PMID: 1824871; PMCID: PMC50802.
      Citations: 11     Fields:    Translation:HumansCells
    37. Talerico M, Berget SM. Effect of 5' splice site mutations on splicing of the preceding intron. Mol Cell Biol. 1990 Dec; 10(12):6299-305. PMID: 2247057; PMCID: PMC362905.
      Citations: 99     Fields:    Translation:HumansAnimalsCells
    38. Cote GJ, Nguyen IN, Berget SM, Gagel RF. Calcitonin exon sequences influence alternative RNA processing. Mol Endocrinol. 1990 Nov; 4(11):1744-9. PMID: 2280774.
      Citations: 8     Fields:    Translation:HumansCells
    39. Stolow DT, Berget SM. UV cross-linking of polypeptides associated with 3'-terminal exons. Mol Cell Biol. 1990 Nov; 10(11):5937-44. PMID: 1700276; PMCID: PMC361390.
      Citations: 9     Fields:    Translation:AnimalsCells
    40. Niwa M, Rose SD, Berget SM. In vitro polyadenylation is stimulated by the presence of an upstream intron. Genes Dev. 1990 Sep; 4(9):1552-9. PMID: 1701407.
      Citations: 153     Fields:    Translation:HumansCells
    41. Robberson BL, Cote GJ, Berget SM. Exon definition may facilitate splice site selection in RNAs with multiple exons. Mol Cell Biol. 1990 Jan; 10(1):84-94. PMID: 2136768; PMCID: PMC360715.
      Citations: 316     Fields:    Translation:AnimalsCells
    42. Smith HC, Harris SG, Zillmann M, Berget SM. Evidence that a nuclear matrix protein participates in premessenger RNA splicing. Exp Cell Res. 1989 Jun; 182(2):521-33. PMID: 2721591.
      Citations: 19     Fields:    Translation:HumansCells
    43. Zapp ML, Berget SM. Evidence for nuclear factors involved in recognition of 5' splice sites. Nucleic Acids Res. 1989 Apr 11; 17(7):2655-74. PMID: 2524033; PMCID: PMC317649.
      Citations: 18     Fields:    Translation:HumansCells
    44. Zillmann M, Zapp ML, Berget SM. Gel electrophoretic isolation of splicing complexes containing U1 small nuclear ribonucleoprotein particles. Mol Cell Biol. 1988 Feb; 8(2):814-21. PMID: 2832738; PMCID: PMC363208.
      Citations: 101     Fields:    Translation:Cells
    45. Zillmann M, Rose SD, Berget SM. U1 small nuclear ribonucleoproteins are required early during spliceosome assembly. Mol Cell Biol. 1987 Aug; 7(8):2877-83. PMID: 2959853; PMCID: PMC367906.
      Citations: 34     Fields:    Translation:Cells
    46. Sperry AO, Berget SM. In vitro cleavage of the simian virus 40 early polyadenylation site adjacent to a required downstream TG sequence. Mol Cell Biol. 1986 Dec; 6(12):4734-41. PMID: 3025668; PMCID: PMC367259.
      Citations: 15     Fields:    Translation:Cells
    47. Yoder SS, Berget SM. Role of adenovirus type 2 early region 4 in the early-to-late switch during productive infection. J Virol. 1986 Nov; 60(2):779-81. PMID: 3773056; PMCID: PMC288957.
      Citations: 9     Fields:    Translation:Cells
    48. Berget SM, Robberson BL. U1, U2, and U4/U6 small nuclear ribonucleoproteins are required for in vitro splicing but not polyadenylation. Cell. 1986 Aug 29; 46(5):691-6. PMID: 2427201.
      Citations: 70     Fields:    Translation:HumansCells
    49. Yoder SS, Berget SM. Posttranscriptional control of DHFR gene expression during adenovirus 2 infection. J Virol. 1985 Apr; 54(1):72-7. PMID: 2983122; PMCID: PMC254762.
      Citations: 8     Fields:    Translation:HumansCells
    50. Berget SM. Are U4 small nuclear ribonucleoproteins involved in polyadenylation? Nature. 1984 May 10-16; 309(5964):179-82. PMID: 6325940.
      Citations: 140     Fields:    Translation:HumansCells
    51. Kinlaw CS, Robberson BL, Berget SM. Fractionation and characterization of human small nuclear ribonucleoproteins containing U1 and U2 RNAs. J Biol Chem. 1983 Jun 10; 258(11):7181-9. PMID: 6189835.
      Citations: 41     Fields:    Translation:HumansCells
    52. Yoder SS, Robberson BL, Leys EJ, Hook AG, Al-Ubaidi M, Yeung CY, Kellems RE, Berget SM. Control of cellular gene expression during adenovirus infection: induction and shut-off of dihydrofolate reductase gene expression by adenovirus type 2. Mol Cell Biol. 1983 May; 3(5):819-28. PMID: 6865943; PMCID: PMC368605.
      Citations: 25     Fields:    Translation:HumansCells
    53. Kinlaw CS, Dusing-Swartz SK, Berget SM. Human U1 and U2 small nuclear ribonucleoproteins contain common and unique polypeptides. Mol Cell Biol. 1982 Oct; 2(10):1159-66. PMID: 6184608; PMCID: PMC369914.
      Citations: 19     Fields:    Translation:Humans
    54. Sharp PA, Berk AJ, Berget SM. Transcription maps of adenovirus. Methods Enzymol. 1980; 65(1):750-68. PMID: 6246372.
      Citations: 81     Fields:    Translation:Cells
    55. Lockard RE, Berget SM, RajBhandary UL, Sharp PA. Nucleotide sequence at the 5' terminus of adenovirus 2 late messenger RNA. J Biol Chem. 1979 Feb 10; 254(3):587-90. PMID: 762082.
      Citations: 1     Fields:    Translation:HumansAnimalsCells
    56. Berget SM, Berk AJ, Harrison T, Sharp PA. Spliced segments at the 5' termini of adenovirus-2 late mRNA: a role for heterogeneous nuclear RNA in mammalian cells. Cold Spring Harb Symp Quant Biol. 1978; 42 Pt 1:523-9. PMID: 277361.
      Citations: 8     Fields:    Translation:Cells
    57. Mozer TJ, Thompson RB, Berget SM, Warner HR. Isolation and characterization of a bacteriophage T5 mutant deficient in deoxynucleoside 5'-monophosphatase activity. J Virol. 1977 Nov; 24(2):642-50. PMID: 335083; PMCID: PMC515976.
      Citations: 4     Fields:    Translation:Cells
    58. Berget SM, Sharp PA. A spliced sequence at the 5'-terminus of adenovirus late mRNA. Brookhaven Symp Biol. 1977 May 12-20; (29):332-44. PMID: 754866.
      Citations: 5     Fields:    Translation:HumansCells
    59. Flint SJ, Berget SM, Sharp PA. Characterization of single-stranded viral DNA sequences present during replication of adenovirus types 2 and 5. Cell. 1976 Dec; 9(4 Pt 1):559-71. PMID: 1009576.
      Citations: 20     Fields:    Translation:Cells
    60. Berget SM, Flint SJ, Williams JF, Sharp PA. Adenovirus transcription. IV. Synthesis of viral-specific RNA in human cells infected with temperature-sensitive mutants of adenovirus 5. J Virol. 1976 Sep; 19(3):879-89. PMID: 972434; PMCID: PMC354928.
      Citations: 11     Fields:    Translation:Cells
    61. Flint SJ, Berget SM, Sharp PA. Adenovirus transcription. III. Mapping of viral RNA sequences in cells productively infected by adenovirus type 5. Virology. 1976 Jul 15; 72(2):443-55. PMID: 948869.
      Citations: 16     Fields:    Translation:Cells
    62. Berget SM, Mozer TJ, Warner HR. Early events after infection of Escherichia coli by bacteriophage T5. II. Control of the bacteriophage-induced 5'-nucleotidase activity. J Virol. 1976 Apr; 18(1):71-9. PMID: 176472; PMCID: PMC515523.
      Citations: 4     Fields:    Translation:Cells
    63. Warner HR, Drong RF, Berget SM. Early events after infection of Escherichia coli by bacteriophage T5. Induction of a 5'-nucleotidase activity and excretion of free bases. J Virol. 1975 Feb; 15(2):273-80. PMID: 163355; PMCID: PMC354450.
      Citations: 17     Fields:    Translation:Cells
    64. Berget SM, Warner HR, McCorquodale DJ. Isolation and partial characterization of bacteriophage T5 mutants deficient in the ability to induce deoxynucleoside monophosphate kinase. J Virol. 1974 Jul; 14(1):78-85. PMID: 4365325; PMCID: PMC355480.
      Citations: 3     Fields:    Translation:Cells
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