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TIMOTHY BAKER

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Mo L, Crowther TW, Maynard DS, van den Hoogen J, Ma H, Bialic-Murphy L, Liang J, de-Miguel S, Nabuurs GJ, Reich PB, Phillips OL, Abegg M, Adou Yao YC, Alberti G, Almeyda Zambrano AM, Alvarado BV, Alvarez-D?vila E, Alvarez-Loayza P, Alves LF, Amaral I, Ammer C, Ant?n-Fern?ndez C, Araujo-Murakami A, Arroyo L, Avitabile V, Aymard GA, Baker TR, Balazy R, Banki O, Barroso JG, Bastian ML, Bastin JF, Birigazzi L, Birnbaum P, Bitariho R, Boeckx P, Bongers F, Boonman CCF, Bouriaud O, Brancalion PHS, Brandl S, Brearley FQ, Brienen R, Broadbent EN, Bruelheide H, Bussotti F, Gatti RC, C?sar RG, Cesljar G, Chazdon R, Chen HYH, Chisholm C, Cho H, Cienciala E, Clark C, Clark D, Colletta GD, Coomes DA, Valverde FC, Corral-Rivas JJ, Crim PM, Cumming JR, Dayanandan S, de Gasper AL, Decuyper M, Derroire G, DeVries B, Djordjevic I, Dolezal J, Dourdain A, Engone Obiang NL, Enquist BJ, Eyre TJ, Fandohan AB, Fayle TM, Feldpausch TR, Ferreira LV, Fin?r L, Fischer M, Fletcher C, Frizzera L, Gamarra JGP, Gianelle D, Glick HB, Harris DJ, Hector A, Hemp A, Hengeveld G, H?rault B, Herbohn JL, Herold M, Hietz P, Hillers A, Honorio Coronado EN, Hui C, Ibanez T, Imai N, Jagodzinski AM, Jaroszewicz B, Johannsen VK, Joly CA, Jucker T, Jung I, Karminov V, Kartawinata K, Kearsley E, Kenfack D, Kennard DK, Kepfer-Rojas S, Keppel G, Khan ML, Killeen TJ, Kim HS, Kitayama K, K?hl M, Korjus H, Kraxner F, Kucher D, Laarmann D, Lang M, Lewis SL, Li Y, Lopez-Gonzalez G, Lu H, Lukina NV, Maitner BS, Malhi Y, Marcon E, Marimon BS, Marimon-Junior BH, Marshall AR, Martin EH, McCarthy JK, Meave JA, Melo-Cruz O, Mendoza C, Mendoza-Polo I, Miscicki S, Merow C, Mendoza AM, Moreno VS, Mukul SA, Mundhenk P, Nava-Miranda MG, Neill D, Neldner VJ, Nevenic RV, Ngugi MR, Niklaus PA, Ontikov P, Ortiz-Malavasi E, Pan Y, Paquette A, Parada-Gutierrez A, Parfenova EI, Park M, Parren M, Parthasarathy N, Peri PL, Pfautsch S, Picard N, Piedade MTF, Piotto D, Pitman NCA, Poorter L, Poulsen AD, Poulsen JR, Pretzsch H, Arevalo FR, Restrepo-Correa Z, Richardson SJ, Rodeghiero M, Rolim SG, Roopsind A, Rovero F, Rutishauser E, Saikia P, Salas-Eljatib C, Saner P, Schall P, Schelhaas MJ, Schepaschenko D, Scherer-Lorenzen M, Schmid B, Sch?ngart J, Searle EB, Seben V, Serra-Diaz JM, Sheil D, Shvidenko AZ, Da Silva AC, Silva-Espejo JE, Silveira M, Singh J, Sist P, Slik F, Sonk? B, Sosinski EE, Souza AF, Sterenczak KJ, Svenning JC, Svoboda M, Swanepoel B, Targhetta N, Tchebakova N, Ter Steege H, Thomas R, Tikhonova E, Umunay PM, Usoltsev VA, Valencia R, Valladares F, Van Bodegom PM, van der Plas F, Van Do T, van Nuland ME, Vasquez RM, Verbeeck H, Viana H, Vibrans AC, Vieira S, von Gadow K, Wang HF, Watson JV, Werner GDA, Wittmann F, Woell H, Wortel V, Zagt R, Zawila-Niedzwiecki T, Zhang C, Zhao X, Zhou M, Zhu ZX, Zo-Bi IC, Zohner CM. The global distribution and drivers of wood density and their impact on forest carbon stocks. Nat Ecol Evol. 2024 Dec; 8(12):2195-2212. PMID: 39406932; PMCID: PMC11618071.
      Citations:    
    2. Mo L, Zohner CM, Reich PB, Liang J, de Miguel S, Nabuurs GJ, Renner SS, van den Hoogen J, Araza A, Herold M, Mirzagholi L, Ma H, Averill C, Phillips OL, Gamarra JGP, Hordijk I, Routh D, Abegg M, Adou Yao YC, Alberti G, Almeyda Zambrano AM, Alvarado BV, Alvarez-D?vila E, Alvarez-Loayza P, Alves LF, Amaral I, Ammer C, Ant?n-Fern?ndez C, Araujo-Murakami A, Arroyo L, Avitabile V, Aymard GA, Baker TR, Balazy R, Banki O, Barroso JG, Bastian ML, Bastin JF, Birigazzi L, Birnbaum P, Bitariho R, Boeckx P, Bongers F, Bouriaud O, Brancalion PHS, Brandl S, Brearley FQ, Brienen R, Broadbent EN, Bruelheide H, Bussotti F, Cazzolla Gatti R, C?sar RG, Cesljar G, Chazdon RL, Chen HYH, Chisholm C, Cho H, Cienciala E, Clark C, Clark D, Colletta GD, Coomes DA, Cornejo Valverde F, Corral-Rivas JJ, Crim PM, Cumming JR, Dayanandan S, de Gasper AL, Decuyper M, Derroire G, DeVries B, Djordjevic I, Dolezal J, Dourdain A, Engone Obiang NL, Enquist BJ, Eyre TJ, Fandohan AB, Fayle TM, Feldpausch TR, Ferreira LV, Fin?r L, Fischer M, Fletcher C, Frizzera L, Gianelle D, Glick HB, Harris DJ, Hector A, Hemp A, Hengeveld G, H?rault B, Herbohn JL, Hillers A, Honorio Coronado EN, Hui C, Ibanez T, Imai N, Jagodzinski AM, Jaroszewicz B, Johannsen VK, Joly CA, Jucker T, Jung I, Karminov V, Kartawinata K, Kearsley E, Kenfack D, Kennard DK, Kepfer-Rojas S, Keppel G, Khan ML, Killeen TJ, Kim HS, Kitayama K, K?hl M, Korjus H, Kraxner F, Kucher D, Laarmann D, Lang M, Lu H, Lukina NV, Maitner BS, Malhi Y, Marcon E, Marimon BS, Marimon-Junior BH, Marshall AR, Martin EH, Meave JA, Melo-Cruz O, Mendoza C, Mendoza-Polo I, Miscicki S, Merow C, Monteagudo Mendoza A, Moreno VS, Mukul SA, Mundhenk P, Nava-Miranda MG, Neill D, Neldner VJ, Nevenic RV, Ngugi MR, Niklaus PA, Oleksyn J, Ontikov P, Ortiz-Malavasi E, Pan Y, Paquette A, Parada-Gutierrez A, Parfenova EI, Park M, Parren M, Parthasarathy N, Peri PL, Pfautsch S, Picard N, Piedade MTF, Piotto D, Pitman NCA, Poulsen AD, Poulsen JR, Pretzsch H, Ramirez Arevalo F, Restrepo-Correa Z, Rodeghiero M, Rolim SG, Roopsind A, Rovero F, Rutishauser E, Saikia P, Salas-Eljatib C, Saner P, Schall P, Schelhaas MJ, Schepaschenko D, Scherer-Lorenzen M, Schmid B, Sch?ngart J, Searle EB, Seben V, Serra-Diaz JM, Sheil D, Shvidenko AZ, Silva-Espejo JE, Silveira M, Singh J, Sist P, Slik F, Sonk? B, Souza AF, Sterenczak KJ, Svenning JC, Svoboda M, Swanepoel B, Targhetta N, Tchebakova N, Ter Steege H, Thomas R, Tikhonova E, Umunay PM, Usoltsev VA, Valencia R, Valladares F, van der Plas F, Van Do T, van Nuland ME, Vasquez RM, Verbeeck H, Viana H, Vibrans AC, Vieira S, von Gadow K, Wang HF, Watson JV, Werner GDA, Wiser SK, Wittmann F, Woell H, Wortel V, Zagt R, Zawila-Niedzwiecki T, Zhang C, Zhao X, Zhou M, Zhu ZX, Zo-Bi IC, Gann GD, Crowther TW. Integrated global assessment of the natural forest carbon potential. Nature. 2023 12; 624(7990):92-101. PMID: 37957399; PMCID: PMC10700142.
      Citations:    
    3. Liang J, Gamarra JGP, Picard N, Zhou M, Pijanowski B, Jacobs DF, Reich PB, Crowther TW, Nabuurs GJ, de-Miguel S, Fang J, Woodall CW, Svenning JC, Jucker T, Bastin JF, Wiser SK, Slik F, H?rault B, Alberti G, Keppel G, Hengeveld GM, Ibisch PL, Silva CA, Ter Steege H, Peri PL, Coomes DA, Searle EB, von Gadow K, Jaroszewicz B, Abbasi AO, Abegg M, Yao YCA, Aguirre-Guti?rrez J, Zambrano AMA, Altman J, Alvarez-D?vila E, ?lvarez-Gonz?lez JG, Alves LF, Amani BHK, Amani CA, Ammer C, Ilondea BA, Ant?n-Fern?ndez C, Avitabile V, Aymard GA, Azihou AF, Baard JA, Baker TR, Balazy R, Bastian ML, Batumike R, Bauters M, Beeckman H, Benu NMH, Bitariho R, Boeckx P, Bogaert J, Bongers F, Bouriaud O, Brancalion PHS, Brandl S, Brearley FQ, Briseno-Reyes J, Broadbent EN, Bruelheide H, Bulte E, Catlin AC, Cazzolla Gatti R, C?sar RG, Chen HYH, Chisholm C, Cienciala E, Colletta GD, Corral-Rivas JJ, Cuchietti A, Cuni-Sanchez A, Dar JA, Dayanandan S, de Haulleville T, Decuyper M, Delabye S, Derroire G, DeVries B, Diisi J, Do TV, Dolezal J, Dourdain A, Durrheim GP, Obiang NLE, Ewango CEN, Eyre TJ, Fayle TM, Feunang LFN, Fin?r L, Fischer M, Fridman J, Frizzera L, de Gasper AL, Gianelle D, Glick HB, Gonzalez-Elizondo MS, Gorenstein L, Habonayo R, Hardy OJ, Harris DJ, Hector A, Hemp A, Herold M, Hillers A, Hubau W, Ibanez T, Imai N, Imani G, Jagodzinski AM, Janecek S, Johannsen VK, Joly CA, Jumbam B, Kabelong BLPR, Kahsay GA, Karminov V, Kartawinata K, Kassi JN, Kearsley E, Kennard DK, Kepfer-Rojas S, Khan ML, Kigomo JN, Kim HS, Klauberg C, Klomberg Y, Korjus H, Kothandaraman S, Kraxner F, Kumar A, Kuswandi R, Lang M, Lawes MJ, Leite RV, Lentner G, Lewis SL, Libalah MB, Lisingo J, L?pez-Serrano PM, Lu H, Lukina NV, Lykke AM, Maicher V, Maitner BS, Marcon E, Marshall AR, Martin EH, Martynenko O, Mbayu FM, Mbuvi MTE, Meave JA, Merow C, Miscicki S, Moreno VS, Morera A, Mukul SA, M?ller JC, Murdjoko A, Nava-Miranda MG, Ndive LE, Neldner VJ, Nevenic RV, Nforbelie LN, Ngoh ML, N'Guessan AE, Ngugi MR, Ngute ASK, Njila ENN, Nyako MC, Ochuodho TO, Oleksyn J, Paquette A, Parfenova EI, Park M, Parren M, Parthasarathy N, Pfautsch S, Phillips OL, Piedade MTF, Piotto D, Pollastrini M, Poorter L, Poulsen JR, Poulsen AD, Pretzsch H, Rodeghiero M, Rolim SG, Rovero F, Rutishauser E, Sagheb-Talebi K, Saikia P, Sainge MN, Salas-Eljatib C, Salis A, Schall P, Schepaschenko D, Scherer-Lorenzen M, Schmid B, Sch?ngart J, ?eben V, Sellan G, Selvi F, Serra-Diaz JM, Sheil D, Shvidenko AZ, Sist P, Souza AF, Sterenczak KJ, Sullivan MJP, Sundarapandian S, Svoboda M, Swaine MD, Targhetta N, Tchebakova N, Trethowan LA, Tropek R, Mukendi JT, Umunay PM, Usoltsev VA, Vaglio Laurin G, Valentini R, Valladares F, van der Plas F, Vega-Nieva DJ, Verbeeck H, Viana H, Vibrans AC, Vieira SA, Vleminckx J, Waite CE, Wang HF, Wasingya EK, Wekesa C, Westerlund B, Wittmann F, Wortel V, Zawila-Niedzwiecki T, Zhang C, Zhao X, Zhu J, Zhu X, Zhu ZX, Zo-Bi IC, Hui C. Co-limitation towards lower latitudes shapes global forest diversity gradients. Nat Ecol Evol. 2022 10; 6(10):1423-1437. PMID: 35941205.
      Citations:    
    4. Chen LS, Baker T, Hung RJ, Horton A, Culverhouse R, Hartz S, Saccone N, Cheng I, Deng B, Han Y, Hansen HM, Horsman J, Kim C, Rosenberger A, Aben KK, Andrew AS, Chang SC, Saum KU, Dienemann H, Hatsukami DK, Johnson EO, Pande M, Wrensch MR, McLaughlin J, Skaug V, van der Heijden EH, Wampfler J, Wenzlaff A, Woll P, Zienolddiny S, Brenner H, Duell EJ, Haugen A, Kiemeney LA, Lazarus P, Le Marchand L, Liu G, Mayordomo J, Risch A, Schwartz AG, Teare MD, Wu X, Wiencke JK, Yang P, Zhang ZF, Spitz MR, Amos CI, Bierut LJ, Bickeb?ller H, Br?ske I. Genetic Risk Can Be Decreased: Quitting Smoking Decreases and Delays Lung Cancer for Smokers With High and Low CHRNA5 Risk Genotypes - A Meta-Analysis. EBioMedicine. 2016 Sep; 11:219-226. PMID: 27543155; PMCID: PMC5049934.
      Citations: 19     Fields:    Translation:Humans
    5. Yan X, Cardone G, Zhang X, Zhou ZH, Baker TS. Single particle analysis integrated with microscopy: a high-throughput approach for reconstructing icosahedral particles. J Struct Biol. 2014 Apr; 186(1):8-18. PMID: 24613762; PMCID: PMC4070310.
      Citations: 1     Fields:    
    6. Tang J, Jose J, Chipman P, Zhang W, Kuhn RJ, Baker TS. Molecular links between the E2 envelope glycoprotein and nucleocapsid core in Sindbis virus. J Mol Biol. 2011 Dec 02; 414(3):442-59. PMID: 22001018; PMCID: PMC3407685.
      Citations: 36     Fields:    Translation:AnimalsCells
    7. Tang J, Lee KK, Bothner B, Baker TS, Yeager M, Johnson JE. Dynamics and stability in maturation of a T=4 virus. J Mol Biol. 2009 Sep 25; 392(3):803-12. PMID: 19627990; PMCID: PMC2766526.
      Citations: 14     Fields:    Translation:Cells
    8. Yan X, Yu Z, Zhang P, Battisti AJ, Holdaway HA, Chipman PR, Bajaj C, Bergoin M, Rossmann MG, Baker TS. The capsid proteins of a large, icosahedral dsDNA virus. J Mol Biol. 2009 Jan 30; 385(4):1287-99. PMID: 19027752; PMCID: PMC2911444.
      Citations: 28     Fields:    Translation:Cells
    9. Ji Y, Marinescu DC, Zhang W, Zhang X, Yan X, Baker TS. A model-based parallel origin and orientation refinement algorithm for cryoTEM and its application to the study of virus structures. J Struct Biol. 2006 Apr; 154(1):1-19. PMID: 16459100; PMCID: PMC4147871.
      Citations: 17     Fields:    Translation:Cells
    10. Zhang X, Ji Y, Zhang L, Harrison SC, Marinescu DC, Nibert ML, Baker TS. Features of reovirus outer capsid protein mu1 revealed by electron cryomicroscopy and image reconstruction of the virion at 7.0 Angstrom resolution. Structure. 2005 Oct; 13(10):1545-57. PMID: 16216585; PMCID: PMC4126556.
      Citations: 46     Fields:    Translation:AnimalsCells
    11. Zhang X, Tang J, Walker SB, O'Hara D, Nibert ML, Duncan R, Baker TS. Structure of avian orthoreovirus virion by electron cryomicroscopy and image reconstruction. Virology. 2005 Dec 05; 343(1):25-35. PMID: 16153672; PMCID: PMC4152769.
      Citations: 31     Fields:    Translation:Cells
    12. Odegard AL, Chandran K, Zhang X, Parker JS, Baker TS, Nibert ML. Putative autocleavage of outer capsid protein micro1, allowing release of myristoylated peptide micro1N during particle uncoating, is critical for cell entry by reovirus. J Virol. 2004 Aug; 78(16):8732-45. PMID: 15280481; PMCID: PMC479062.
      Citations: 74     Fields:    Translation:AnimalsCells
    13. Kong Y, Zhang X, Baker TS, Ma J. A Structural-informatics approach for tracing beta-sheets: building pseudo-C(alpha) traces for beta-strands in intermediate-resolution density maps. J Mol Biol. 2004 May 21; 339(1):117-30. PMID: 15123425; PMCID: PMC4148645.
      Citations: 36     Fields:    Translation:Cells
    14. Wetter DW, Kenford SL, Welsch SK, Smith SS, Fouladi RT, Fiore MC, Baker TB. Prevalence and predictors of transitions in smoking behavior among college students. Health Psychol. 2004 Mar; 23(2):168-77. PMID: 15008662.
      Citations: 105     Fields:    Translation:Humans
    15. Zhang X, Walker SB, Chipman PR, Nibert ML, Baker TS. Reovirus polymerase lambda 3 localized by cryo-electron microscopy of virions at a resolution of 7.6 A. Nat Struct Biol. 2003 Dec; 10(12):1011-8. PMID: 14608373; PMCID: PMC4152824.
      Citations: 103     Fields:    Translation:Cells
    16. Bernal RA, Hafenstein S, Olson NH, Bowman VD, Chipman PR, Baker TS, Fane BA, Rossmann MG. Structural studies of bacteriophage alpha3 assembly. J Mol Biol. 2003 Jan 03; 325(1):11-24. PMID: 12473449; PMCID: PMC4130226.
      Citations: 24     Fields:    Translation:Cells
    17. Kim J, Zhang X, Centonze VE, Bowman VD, Noble S, Baker TS, Nibert ML. The hydrophilic amino-terminal arm of reovirus core shell protein lambda1 is dispensable for particle assembly. J Virol. 2002 Dec; 76(23):12211-22. PMID: 12414960; PMCID: PMC136864.
      Citations: 13     Fields:    Translation:Cells
    18. Bowman VD, Chase ES, Franz AW, Chipman PR, Zhang X, Perry KL, Baker TS, Smith TJ. An antibody to the putative aphid recognition site on cucumber mosaic virus recognizes pentons but not hexons. J Virol. 2002 Dec; 76(23):12250-8. PMID: 12414964; PMCID: PMC136911.
      Citations: 39     Fields:    Translation:AnimalsCellsPHPublic Health
    19. Simpson AA, Tao Y, Leiman PG, Badasso MO, He Y, Jardine PJ, Olson NH, Morais MC, Grimes S, Anderson DL, Baker TS, Rossmann MG, Guasch A, Pous J, Ibarra B, Gomis-R?th FX, Valpuesta JM, Sousa N, Carrascosa JL, Coll M. Note to the Paper by Guasch et al. (2002) Detailed Architecture of a DNA Translocating Machine: The High-resolution Structure of the Bacteriophage ?29 Connector Particle. J Mol Biol. 2002 Aug 09; 321(2):379-380. PMID: 25308998; PMCID: PMC4191910.
      Citations:    Fields:    
    20. Luongo CL, Zhang X, Walker SB, Chen Y, Broering TJ, Farsetta DL, Bowman VD, Baker TS, Nibert ML. Loss of activities for mRNA synthesis accompanies loss of lambda2 spikes from reovirus cores: an effect of lambda2 on lambda1 shell structure. Virology. 2002 Apr 25; 296(1):24-38. PMID: 12036315.
      Citations: 8     Fields:    Translation:Cells
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