Connection

SHINYA YAMAMOTO to Animals

This is a "connection" page, showing publications SHINYA YAMAMOTO has written about Animals.
Connection Strength

1.383
  1. Functional analysis of pathogenic variants in LAMB1-related leukoencephalopathy reveals genotype-phenotype correlations and suggests its role in glial cells. Hum Mol Genet. 2025 May 17; 34(11):990-999.
    View in: PubMed
    Score: 0.055
  2. A Zika virus protein expression screen in Drosophila to investigate targeted host pathways during development. Dis Model Mech. 2024 Feb 01; 17(2).
    View in: PubMed
    Score: 0.050
  3. Integrating non-mammalian model organisms in the diagnosis of rare genetic diseases in humans. Nat Rev Genet. 2024 Jan; 25(1):46-60.
    View in: PubMed
    Score: 0.048
  4. Role of Drosophila in Human Disease Research 2.0. Int J Mol Sci. 2022 Apr 11; 23(8).
    View in: PubMed
    Score: 0.044
  5. Functional Studies of Genetic Variants Associated with Human Diseases in Notch Signaling-Related Genes Using Drosophila. Methods Mol Biol. 2022; 2472:235-276.
    View in: PubMed
    Score: 0.043
  6. TM2D genes regulate Notch signaling and neuronal function in Drosophila. PLoS Genet. 2021 12; 17(12):e1009962.
    View in: PubMed
    Score: 0.043
  7. Drosophila as a Model for Infectious Diseases. Int J Mol Sci. 2021 Mar 08; 22(5).
    View in: PubMed
    Score: 0.041
  8. Post-Developmental Roles of Notch Signaling in the Nervous System. Biomolecules. 2020 07 01; 10(7).
    View in: PubMed
    Score: 0.039
  9. Making sense out of missense mutations: Mechanistic dissection of Notch receptors through structure-function studies in Drosophila. Dev Growth Differ. 2020 Jan; 62(1):15-34.
    View in: PubMed
    Score: 0.038
  10. The fruit fly at the interface of diagnosis and pathogenic mechanisms of rare and common human diseases. Hum Mol Genet. 2019 11 21; 28(R2):R207-R214.
    View in: PubMed
    Score: 0.037
  11. In Vivo Functional Study of Disease-associated Rare Human Variants Using Drosophila. J Vis Exp. 2019 08 20; (150).
    View in: PubMed
    Score: 0.037
  12. Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information. J Vis Exp. 2019 08 15; (150).
    View in: PubMed
    Score: 0.037
  13. Focal brain lesions induced with ultraviolet irradiation. Sci Rep. 2018 05 22; 8(1):7968.
    View in: PubMed
    Score: 0.034
  14. Integration of Drosophila and Human Genetics to Understand Notch Signaling Related Diseases. Adv Exp Med Biol. 2018; 1066:141-185.
    View in: PubMed
    Score: 0.033
  15. Morgan's legacy: fruit flies and the functional annotation of conserved genes. Cell. 2015 Sep 24; 163(1):12-4.
    View in: PubMed
    Score: 0.028
  16. A drosophila genetic resource of mutants to study mechanisms underlying human genetic diseases. Cell. 2014 Sep 25; 159(1):200-214.
    View in: PubMed
    Score: 0.026
  17. Measuring the actual timing of liquid-reward delivery using a thermistor. J Neurosci Methods. 2014 May 30; 229:108-13.
    View in: PubMed
    Score: 0.025
  18. Dopamine dynamics and signaling in Drosophila: an overview of genes, drugs and behavioral paradigms. Exp Anim. 2014; 63(2):107-19.
    View in: PubMed
    Score: 0.025
  19. Basal ganglia circuits for reward value-guided behavior. Annu Rev Neurosci. 2014; 37:289-306.
    View in: PubMed
    Score: 0.025
  20. Introduction to Notch signaling. Methods Mol Biol. 2014; 1187:1-14.
    View in: PubMed
    Score: 0.025
  21. Preface. Notch signaling. Methods Mol Biol. 2014; 1187:v.
    View in: PubMed
    Score: 0.025
  22. Protein phosphatase 1? limits ring canal constriction during Drosophila germline cyst formation. PLoS One. 2013; 8(7):e70502.
    View in: PubMed
    Score: 0.024
  23. Reward value-contingent changes of visual responses in the primate caudate tail associated with a visuomotor skill. J Neurosci. 2013 Jul 03; 33(27):11227-38.
    View in: PubMed
    Score: 0.024
  24. A mutation in EGF repeat-8 of Notch discriminates between Serrate/Jagged and Delta family ligands. Science. 2012 Nov 30; 338(6111):1229-32.
    View in: PubMed
    Score: 0.023
  25. What and where information in the caudate tail guides saccades to visual objects. J Neurosci. 2012 Aug 08; 32(32):11005-16.
    View in: PubMed
    Score: 0.023
  26. Endocytosis and intracellular trafficking of Notch and its ligands. Curr Top Dev Biol. 2010; 92:165-200.
    View in: PubMed
    Score: 0.019
  27. Glucose uptake in pigment glia suppresses Tau-induced inflammation and photoreceptor degeneration. Dis Model Mech. 2025 Apr 01; 18(4).
    View in: PubMed
    Score: 0.014
  28. De novo variants in CDKL1 and CDKL2 are associated with neurodevelopmental symptoms. Am J Hum Genet. 2025 Apr 03; 112(4):846-862.
    View in: PubMed
    Score: 0.014
  29. Loss-of-function in RBBP5 results in a syndromic neurodevelopmental disorder associated with microcephaly. Genet Med. 2024 Nov; 26(11):101218.
    View in: PubMed
    Score: 0.013
  30. Dominant missense variants in SREBF2 are associated with complex dermatological, neurological, and skeletal abnormalities. Genet Med. 2024 Sep; 26(9):101174.
    View in: PubMed
    Score: 0.013
  31. Effects of focal cortical cooling on somatosensory evoked potentials in rats. Brain Res. 2024 Oct 01; 1840:148995.
    View in: PubMed
    Score: 0.013
  32. De novo variants in FRYL are associated with developmental delay, intellectual disability, and dysmorphic features. Am J Hum Genet. 2024 04 04; 111(4):742-760.
    View in: PubMed
    Score: 0.013
  33. Comparative exploration of mammalian deafness gene homologues in the Drosophila auditory organ shows genetic correlation between insect and vertebrate hearing. PLoS One. 2024; 19(2):e0297846.
    View in: PubMed
    Score: 0.013
  34. Loss of the endoplasmic reticulum protein Tmem208 affects cell polarity, development, and viability. Proc Natl Acad Sci U S A. 2024 Feb 27; 121(9):e2322582121.
    View in: PubMed
    Score: 0.013
  35. A de novo missense variant in EZH1 associated with developmental delay exhibits functional deficits in Drosophila melanogaster. Genetics. 2023 08 09; 224(4).
    View in: PubMed
    Score: 0.012
  36. A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins. Cell Rep. 2023 08 29; 42(8):112842.
    View in: PubMed
    Score: 0.012
  37. Bi-allelic variants in INTS11 are associated with a complex neurological disorder. Am J Hum Genet. 2023 05 04; 110(5):774-789.
    View in: PubMed
    Score: 0.012
  38. De novo variants in MRTFB have gain-of-function activity in Drosophila and are associated with a novel neurodevelopmental phenotype with dysmorphic features. Genet Med. 2023 06; 25(6):100833.
    View in: PubMed
    Score: 0.012
  39. Notch Missense Mutations in Drosophila Reveal Functions of Specific EGF-like Repeats in Notch Folding, Trafficking, and Signaling. Biomolecules. 2022 11 25; 12(12).
    View in: PubMed
    Score: 0.012
  40. A clustering of heterozygous missense variants in the crucial chromatin modifier WDR5 defines a new neurodevelopmental disorder. HGG Adv. 2023 01 12; 4(1):100157.
    View in: PubMed
    Score: 0.011
  41. Drosophila functional screening of de novo variants in autism uncovers damaging variants and facilitates discovery of rare neurodevelopmental diseases. Cell Rep. 2022 03 15; 38(11):110517.
    View in: PubMed
    Score: 0.011
  42. Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly. Science. 2022 03 04; 375(6584):eabk2432.
    View in: PubMed
    Score: 0.011
  43. Loss of IRF2BPL impairs neuronal maintenance through excess Wnt signaling. Sci Adv. 2022 01 21; 8(3):eabl5613.
    View in: PubMed
    Score: 0.011
  44. TNPO2 variants associate with human developmental delays, neurologic deficits, and dysmorphic features and alter TNPO2 activity in Drosophila. Am J Hum Genet. 2021 09 02; 108(9):1669-1691.
    View in: PubMed
    Score: 0.011
  45. Heterozygous loss-of-function variants significantly expand the phenotypes associated with loss of GDF11. Genet Med. 2021 10; 23(10):1889-1900.
    View in: PubMed
    Score: 0.010
  46. Model organisms contribute to diagnosis and discovery in the undiagnosed diseases network: current state and a future vision. Orphanet J Rare Dis. 2021 05 07; 16(1):206.
    View in: PubMed
    Score: 0.010
  47. BICRA, a SWI/SNF Complex Member, Is Associated with BAF-Disorder Related Phenotypes in Humans and Model Organisms. Am J Hum Genet. 2020 12 03; 107(6):1096-1112.
    View in: PubMed
    Score: 0.010
  48. De Novo Variants in CDK19 Are Associated with a Syndrome Involving Intellectual Disability and Epileptic Encephalopathy. Am J Hum Genet. 2020 05 07; 106(5):717-725.
    View in: PubMed
    Score: 0.010
  49. Loss- or Gain-of-Function Mutations in ACOX1 Cause Axonal Loss via Different Mechanisms. Neuron. 2020 05 20; 106(4):589-606.e6.
    View in: PubMed
    Score: 0.010
  50. A Genetic Screen for Genes That Impact Peroxisomes in Drosophila Identifies Candidate Genes for Human Disease. G3 (Bethesda). 2020 01 07; 10(1):69-77.
    View in: PubMed
    Score: 0.009
  51. Maternal almondex, a neurogenic gene, is required for proper subcellular Notch distribution in early Drosophila embryogenesis. Dev Growth Differ. 2020 Jan; 62(1):80-93.
    View in: PubMed
    Score: 0.009
  52. An efficient CRISPR-based strategy to insert small and large fragments of DNA using short homology arms. Elife. 2019 11 01; 8.
    View in: PubMed
    Score: 0.009
  53. Disruptive mutations in TANC2 define a neurodevelopmental syndrome associated with psychiatric disorders. Nat Commun. 2019 10 15; 10(1):4679.
    View in: PubMed
    Score: 0.009
  54. De Novo Variants in WDR37 Are Associated with Epilepsy, Colobomas, Dysmorphism, Developmental Delay, Intellectual Disability, and Cerebellar Hypoplasia. Am J Hum Genet. 2019 08 01; 105(2):413-424.
    View in: PubMed
    Score: 0.009
  55. Effect of Genetic Diagnosis on Patients with Previously Undiagnosed Disease. N Engl J Med. 2018 11 29; 379(22):2131-2139.
    View in: PubMed
    Score: 0.009
  56. Functional variants in TBX2 are associated with a syndromic cardiovascular and skeletal developmental disorder. Hum Mol Genet. 2018 07 15; 27(14):2454-2465.
    View in: PubMed
    Score: 0.009
  57. A gene-specific T2A-GAL4 library for Drosophila. Elife. 2018 03 22; 7.
    View in: PubMed
    Score: 0.008
  58. Pleiotropic neuropathological and biochemical alterations associated with Myo5a mutation in a rat Model. Brain Res. 2018 01 15; 1679:155-170.
    View in: PubMed
    Score: 0.008
  59. Model Organisms Facilitate Rare Disease Diagnosis and Therapeutic Research. Genetics. 2017 09; 207(1):9-27.
    View in: PubMed
    Score: 0.008
  60. Clinically severe CACNA1A alleles affect synaptic function and neurodegeneration differentially. PLoS Genet. 2017 Jul; 13(7):e1006905.
    View in: PubMed
    Score: 0.008
  61. Neutral Competition for Drosophila Follicle and Cyst Stem Cell Niches Requires Vesicle Trafficking Genes. Genetics. 2017 07; 206(3):1417-1428.
    View in: PubMed
    Score: 0.008
  62. Loss of Nardilysin, a Mitochondrial Co-chaperone for a-Ketoglutarate Dehydrogenase, Promotes mTORC1 Activation and Neurodegeneration. Neuron. 2017 Jan 04; 93(1):115-131.
    View in: PubMed
    Score: 0.008
  63. Rare Functional Variant in TM2D3 is Associated with Late-Onset Alzheimer's Disease. PLoS Genet. 2016 Oct; 12(10):e1006327.
    View in: PubMed
    Score: 0.008
  64. Loss of Frataxin induces iron toxicity, sphingolipid synthesis, and Pdk1/Mef2 activation, leading to neurodegeneration. Elife. 2016 06 25; 5.
    View in: PubMed
    Score: 0.007
  65. Ubr3, a Novel Modulator of Hh Signaling Affects the Degradation of Costal-2 and Kif7 through Poly-ubiquitination. PLoS Genet. 2016 05; 12(5):e1006054.
    View in: PubMed
    Score: 0.007
  66. WAC Regulates mTOR Activity by Acting as an Adaptor for the TTT and Pontin/Reptin Complexes. Dev Cell. 2016 Jan 25; 36(2):139-51.
    View in: PubMed
    Score: 0.007
  67. Impaired Mitochondrial Energy Production Causes Light-Induced Photoreceptor Degeneration Independent of Oxidative Stress. PLoS Biol. 2015 Jul; 13(7):e1002197.
    View in: PubMed
    Score: 0.007
  68. A voltage-gated calcium channel regulates lysosomal fusion with endosomes and autophagosomes and is required for neuronal homeostasis. PLoS Biol. 2015 Mar; 13(3):e1002103.
    View in: PubMed
    Score: 0.007
  69. Fruit flies in biomedical research. Genetics. 2015 Mar; 199(3):639-53.
    View in: PubMed
    Score: 0.007
  70. Glial lipid droplets and ROS induced by mitochondrial defects promote neurodegeneration. Cell. 2015 Jan 15; 160(1-2):177-90.
    View in: PubMed
    Score: 0.007
  71. Mitochondrial fusion but not fission regulates larval growth and synaptic development through steroid hormone production. Elife. 2014 Oct 14; 3.
    View in: PubMed
    Score: 0.007
  72. Large-scale identification of chemically induced mutations in Drosophila melanogaster. Genome Res. 2014 Oct; 24(10):1707-18.
    View in: PubMed
    Score: 0.007
  73. The retromer complex is required for rhodopsin recycling and its loss leads to photoreceptor degeneration. PLoS Biol. 2014 Apr; 12(4):e1001847.
    View in: PubMed
    Score: 0.006
  74. Shared mechanisms between Drosophila peripheral nervous system development and human neurodegenerative diseases. Curr Opin Neurobiol. 2014 Aug; 27:158-64.
    View in: PubMed
    Score: 0.006
  75. Drosophila Tempura, a novel protein prenyltransferase a subunit, regulates notch signaling via Rab1 and Rab11. PLoS Biol. 2014 Jan; 12(1):e1001777.
    View in: PubMed
    Score: 0.006
  76. Why skill matters. Trends Cogn Sci. 2013 Sep; 17(9):434-41.
    View in: PubMed
    Score: 0.006
  77. Drosophila EHBP1 regulates Scabrous secretion during Notch-mediated lateral inhibition. J Cell Sci. 2013 Aug 15; 126(Pt 16):3686-96.
    View in: PubMed
    Score: 0.006
  78. The C8ORF38 homologue Sicily is a cytosolic chaperone for a mitochondrial complex I subunit. J Cell Biol. 2013 Mar 18; 200(6):807-20.
    View in: PubMed
    Score: 0.006
  79. Crag is a GEF for Rab11 required for rhodopsin trafficking and maintenance of adult photoreceptor cells. PLoS Biol. 2012; 10(12):e1001438.
    View in: PubMed
    Score: 0.006
  80. Robust representation of stable object values in the oculomotor Basal Ganglia. J Neurosci. 2012 Nov 21; 32(47):16917-32.
    View in: PubMed
    Score: 0.006
  81. dEHBP1 controls exocytosis and recycling of Delta during asymmetric divisions. J Cell Biol. 2012 Jan 09; 196(1):65-83.
    View in: PubMed
    Score: 0.005
  82. Sequoia regulates cell fate decisions in the external sensory organs of adult Drosophila. EMBO Rep. 2009 Jun; 10(6):636-41.
    View in: PubMed
    Score: 0.005
  83. Growth factor treatment and genetic manipulation stimulate neurogenesis and oligodendrogenesis by endogenous neural progenitors in the injured adult spinal cord. J Neurosci. 2006 Nov 15; 26(46):11948-60.
    View in: PubMed
    Score: 0.004
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.