CHAO CHENG to Oligonucleotide Array Sequence Analysis
This is a "connection" page, showing publications CHAO CHENG has written about Oligonucleotide Array Sequence Analysis.
Connection Strength
1.857
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Construction and analysis of an integrated regulatory network derived from high-throughput sequencing data. PLoS Comput Biol. 2011 Nov; 7(11):e1002190.
Score: 0.292
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Systematic identification of transcription factors associated with patient survival in cancers. BMC Genomics. 2009 May 15; 10:225.
Score: 0.246
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Systematic identification of cell cycle regulated transcription factors from microarray time series data. BMC Genomics. 2008 Mar 03; 9:116.
Score: 0.226
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Inferring activity changes of transcription factors by binding association with sorted expression profiles. BMC Bioinformatics. 2007 Nov 16; 8:452.
Score: 0.222
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MARD: a new method to detect differential gene expression in treatment-control time courses. Bioinformatics. 2006 Nov 01; 22(21):2650-7.
Score: 0.203
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Sub-array normalization subject to differentiation. Nucleic Acids Res. 2005; 33(17):5565-73.
Score: 0.191
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TIP: a probabilistic method for identifying transcription factor target genes from ChIP-seq binding profiles. Bioinformatics. 2011 Dec 01; 27(23):3221-7.
Score: 0.073
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Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans. Genome Res. 2011 Feb; 21(2):245-54.
Score: 0.069
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Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data. Genome Res. 2011 Feb; 21(2):276-85.
Score: 0.069
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mRNA expression profiles show differential regulatory effects of microRNAs between estrogen receptor-positive and estrogen receptor-negative breast cancer. Genome Biol. 2009; 10(9):R90.
Score: 0.063
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Inferring microRNA activities by combining gene expression with microRNA target prediction. PLoS One. 2008 Apr 23; 3(4):e1989.
Score: 0.057
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A probe-treatment-reference (PTR) model for the analysis of oligonucleotide expression microarrays. BMC Bioinformatics. 2008 Apr 14; 9:194.
Score: 0.057
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Significant and systematic expression differentiation in long-lived yeast strains. PLoS One. 2007 Oct 31; 2(10):e1095.
Score: 0.055
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Average rank-based score to measure deregulation of molecular pathway gene sets. PLoS One. 2011; 6(11):e27579.
Score: 0.018
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Comparative analyses of time-course gene expression profiles of the long-lived sch9Delta mutant. Nucleic Acids Res. 2010 Jan; 38(1):143-58.
Score: 0.016