STEVEN LUDTKE to Software
This is a "connection" page, showing publications STEVEN LUDTKE has written about Software.
Connection Strength
3.540
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Deep learning-based mixed-dimensional Gaussian mixture model for characterizing variability in cryo-EM. Nat Methods. 2021 08; 18(8):930-936.
Score: 0.531
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New software tools in EMAN2 inspired by EMDatabank map challenge. J Struct Biol. 2018 11; 204(2):283-290.
Score: 0.434
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Single-Particle Refinement and Variability Analysis in EMAN2.1. Methods Enzymol. 2016; 579:159-89.
Score: 0.373
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High resolution single particle refinement in EMAN2.1. Methods. 2016 05 01; 100:25-34.
Score: 0.365
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EMEN2: an object oriented database and electronic lab notebook. Microsc Microanal. 2013 Feb; 19(1):1-10.
Score: 0.295
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3-D structures of macromolecules using single-particle analysis in EMAN. Methods Mol Biol. 2010; 673:157-73.
Score: 0.238
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SPARX, a new environment for Cryo-EM image processing. J Struct Biol. 2007 Jan; 157(1):47-55.
Score: 0.187
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EMAN2: an extensible image processing suite for electron microscopy. J Struct Biol. 2007 Jan; 157(1):38-46.
Score: 0.186
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A 11.5 A single particle reconstruction of GroEL using EMAN. J Mol Biol. 2001 Nov 23; 314(2):253-62.
Score: 0.136
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Improvement of cryo-EM maps by density modification. Nat Methods. 2020 09; 17(9):923-927.
Score: 0.124
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EMAN: semiautomated software for high-resolution single-particle reconstructions. J Struct Biol. 1999 Dec 01; 128(1):82-97.
Score: 0.118
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Convolutional neural networks for automated annotation of cellular cryo-electron tomograms. Nat Methods. 2017 Oct; 14(10):983-985.
Score: 0.101
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De Novo modeling in cryo-EM density maps with Pathwalking. J Struct Biol. 2016 12; 196(3):289-298.
Score: 0.094
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The Electron Microscopy eXchange (EMX) initiative. J Struct Biol. 2016 May; 194(2):156-63.
Score: 0.091
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Constructing and validating initial Ca models from subnanometer resolution density maps with pathwalking. Structure. 2012 Mar 07; 20(3):450-63.
Score: 0.069
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Cryo-EM of macromolecular assemblies at near-atomic resolution. Nat Protoc. 2010 Sep; 5(10):1697-708.
Score: 0.063
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Object oriented database and electronic notebook for transmission electron microscopy. Microsc Microanal. 2003 Dec; 9(6):556-65.
Score: 0.039
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Bridging the information gap: computational tools for intermediate resolution structure interpretation. J Mol Biol. 2001 May 18; 308(5):1033-44.
Score: 0.033
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Single particle tomography in EMAN2. J Struct Biol. 2015 Jun; 190(3):279-90.
Score: 0.022
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CTF Challenge: Result summary. J Struct Biol. 2015 Jun; 190(3):348-59.
Score: 0.021
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MRC2014: Extensions to the MRC format header for electron cryo-microscopy and tomography. J Struct Biol. 2015 Nov; 192(2):146-50.
Score: 0.021