OLIVIER LICHTARGE to Models, Molecular
This is a "connection" page, showing publications OLIVIER LICHTARGE has written about Models, Molecular.
Connection Strength
1.776
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Combining inference from evolution and geometric probability in protein structure evaluation. J Mol Biol. 2003 Aug 01; 331(1):263-79.
Score: 0.158
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An Evolutionary Trace method defines functionally important bases and sites common to RNA families. PLoS Comput Biol. 2020 03; 16(3):e1007583.
Score: 0.125
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Intramolecular allosteric communication in dopamine D2 receptor revealed by evolutionary amino acid covariation. Proc Natl Acad Sci U S A. 2016 Mar 29; 113(13):3539-44.
Score: 0.095
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Elucidation of G-protein and ?-arrestin functional selectivity at the dopamine D2 receptor. Proc Natl Acad Sci U S A. 2015 Jun 02; 112(22):7097-102.
Score: 0.089
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Sequence and structure continuity of evolutionary importance improves protein functional site discovery and annotation. Protein Sci. 2010 Jul; 19(7):1296-311.
Score: 0.064
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Evolution-guided discovery and recoding of allosteric pathway specificity determinants in psychoactive bioamine receptors. Proc Natl Acad Sci U S A. 2010 Apr 27; 107(17):7787-92.
Score: 0.063
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Evolutionary trace annotation of protein function in the structural proteome. J Mol Biol. 2010 Mar 12; 396(5):1451-73.
Score: 0.061
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On itinerant water molecules and detectability of protein-protein interfaces through comparative analysis of homologues. J Mol Biol. 2007 Jun 01; 369(2):584-95.
Score: 0.051
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Composite motifs integrating multiple protein structures increase sensitivity for function prediction. Comput Syst Bioinformatics Conf. 2007; 6:343-55.
Score: 0.050
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Rapid detection of similarity in protein structure and function through contact metric distances. Nucleic Acids Res. 2006; 34(22):e152.
Score: 0.050
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Evolutionary identification of a subtype specific functional site in the ligand binding domain of steroid receptors. Proteins. 2006 Sep 01; 64(4):1046-57.
Score: 0.049
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Evolutionary and structural feedback on selection of sequences for comparative analysis of proteins. Proteins. 2006 Apr 01; 63(1):87-99.
Score: 0.047
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EEPD1 evolved a unique DNA clamping dimer protecting reversed replication forks. Nucleic Acids Res. 2026 Feb 24; 54(5).
Score: 0.047
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Role of transmembrane domain/transmembrane domain interfaces of P-glycoprotein (ABCB1) in solute transport. Convergent information from photoaffinity labeling, site directed mutagenesis and in silico importance prediction. Curr Med Chem. 2006; 13(7):793-805.
Score: 0.047
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A structure and evolution-guided Monte Carlo sequence selection strategy for multiple alignment-based analysis of proteins. Bioinformatics. 2006 Jan 15; 22(2):149-56.
Score: 0.046
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A family of evolution-entropy hybrid methods for ranking protein residues by importance. J Mol Biol. 2004 Mar 05; 336(5):1265-82.
Score: 0.041
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Evolutionary trace of G protein-coupled receptors reveals clusters of residues that determine global and class-specific functions. J Biol Chem. 2004 Feb 27; 279(9):8126-32.
Score: 0.040
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An accurate, sensitive, and scalable method to identify functional sites in protein structures. J Mol Biol. 2003 Feb 07; 326(1):255-61.
Score: 0.038
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Structural clusters of evolutionary trace residues are statistically significant and common in proteins. J Mol Biol. 2002 Feb 08; 316(1):139-54.
Score: 0.036
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Evolutionary traces of functional surfaces along G protein signaling pathway. Methods Enzymol. 2002; 344:536-56.
Score: 0.035
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Evolutionary action score identifies a subset of TP53 mutated myelodysplastic syndrome with favorable prognosis. Blood Cancer J. 2021 03 06; 11(3):52.
Score: 0.033
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Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors. Prog Biophys Mol Biol. 2021 08; 163:171-186.
Score: 0.033
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A regulator of G protein signaling interaction surface linked to effector specificity. Proc Natl Acad Sci U S A. 2000 Feb 15; 97(4):1483-8.
Score: 0.031
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Assessing predictions on fitness effects of missense variants in calmodulin. Hum Mutat. 2019 09; 40(9):1463-1473.
Score: 0.030
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Evaluating the predictions of the protein stability change upon single amino acid substitutions for the FXN CAGI5 challenge. Hum Mutat. 2019 09; 40(9):1392-1399.
Score: 0.030
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Evolutionary action and structural basis of the allosteric switch controlling ?2AR functional selectivity. Nat Commun. 2017 12 18; 8(1):2169.
Score: 0.027
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Identification of functional surfaces of the zinc binding domains of intracellular receptors. J Mol Biol. 1997 Dec 05; 274(3):325-37.
Score: 0.027
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Benchmarking predictions of allostery in liver pyruvate kinase in CAGI4. Hum Mutat. 2017 09; 38(9):1123-1131.
Score: 0.026
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Predicting phenotype from genotype: Improving accuracy through more robust experimental and computational modeling. Hum Mutat. 2017 05; 38(5):569-580.
Score: 0.025
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Meeting review: the Second meeting on the Critical Assessment of Techniques for Protein Structure Prediction (CASP2), Asilomar, California, December 13-16, 1996. Fold Des. 1997; 2(2):R27-42.
Score: 0.025
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HUMAN KINASES DISPLAY MUTATIONAL HOTSPOTS AT COGNATE POSITIONS WITHIN CANCER. Pac Symp Biocomput. 2017; 22:414-425.
Score: 0.025
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Protein stabilization improves STAT3 function in autosomal dominant hyper-IgE syndrome. Blood. 2016 12 29; 128(26):3061-3072.
Score: 0.025
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Evolutionarily conserved Galphabetagamma binding surfaces support a model of the G protein-receptor complex. Proc Natl Acad Sci U S A. 1996 Jul 23; 93(15):7507-11.
Score: 0.024
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An evolutionary trace method defines binding surfaces common to protein families. J Mol Biol. 1996 Mar 29; 257(2):342-58.
Score: 0.024
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Selectivity and evolutionary divergence of metabotropic glutamate receptors for endogenous ligands and G proteins coupled to phospholipase C or TRP channels. J Biol Chem. 2014 Oct 24; 289(43):29961-74.
Score: 0.021
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Functional rescue of beta-adrenoceptor dimerization and trafficking by pharmacological chaperones. Traffic. 2009 Aug; 10(8):1019-33.
Score: 0.015
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The MASH pipeline for protein function prediction and an algorithm for the geometric refinement of 3D motifs. J Comput Biol. 2007 Jul-Aug; 14(6):791-816.
Score: 0.013
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Distinct faces of the Ku heterodimer mediate DNA repair and telomeric functions. Nat Struct Mol Biol. 2007 Apr; 14(4):301-7.
Score: 0.013
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Cavity-aware motifs reduce false positives in protein function prediction. Comput Syst Bioinformatics Conf. 2006; 311-23.
Score: 0.012
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beta-arrestin-dependent, G protein-independent ERK1/2 activation by the beta2 adrenergic receptor. J Biol Chem. 2006 Jan 13; 281(2):1261-73.
Score: 0.012
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Algorithms for structural comparison and statistical analysis of 3D protein motifs. Pac Symp Biocomput. 2005; 334-45.
Score: 0.011
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Computational and biochemical identification of a nuclear pore complex binding site on the nuclear transport carrier NTF2. J Mol Biol. 2004 Nov 19; 344(2):303-10.
Score: 0.011
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Characterization of retinal guanylate cyclase-activating protein 3 (GCAP3) from zebrafish to man. Eur J Neurosci. 2002 Jan; 15(1):63-78.
Score: 0.009
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Prediction and confirmation of a site critical for effector regulation of RGS domain activity. Nat Struct Biol. 2001 Mar; 8(3):234-7.
Score: 0.008
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Genetic mapping of the human C5a receptor. Identification of transmembrane amino acids critical for receptor function. J Biol Chem. 2000 Nov 10; 275(45):35393-401.
Score: 0.008
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Similar structures and shared switch mechanisms of the beta2-adrenoceptor and the parathyroid hormone receptor. Zn(II) bridges between helices III and VI block activation. J Biol Chem. 1999 Jun 11; 274(24):17033-41.
Score: 0.007
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C5a receptor activation. Genetic identification of critical residues in four transmembrane helices. J Biol Chem. 1999 May 28; 274(22):15757-65.
Score: 0.007
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The murine Polycomb-group gene eed and its human orthologue: functional implications of evolutionary conservation. Genomics. 1998 Nov 15; 54(1):79-88.
Score: 0.007
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Receptor and betagamma binding sites in the alpha subunit of the retinal G protein transducin. Science. 1997 Jan 17; 275(5298):381-4.
Score: 0.006