Connection

OLIVIER LICHTARGE to Software

This is a "connection" page, showing publications OLIVIER LICHTARGE has written about Software.
Connection Strength

1.649
  1. ETAscape: analyzing protein networks to predict enzymatic function and substrates in Cytoscape. Bioinformatics. 2012 Aug 15; 28(16):2186-8.
    View in: PubMed
    Score: 0.289
  2. Evolutionary trace for prediction and redesign of protein functional sites. Methods Mol Biol. 2012; 819:29-42.
    View in: PubMed
    Score: 0.280
  3. PyETV: a PyMOL evolutionary trace viewer to analyze functional site predictions in protein complexes. Bioinformatics. 2010 Dec 01; 26(23):2981-2.
    View in: PubMed
    Score: 0.257
  4. Background frequencies for residue variability estimates: BLOSUM revisited. BMC Bioinformatics. 2007 Dec 27; 8:488.
    View in: PubMed
    Score: 0.212
  5. Meta-EA: a gene-specific combination of available computational tools for predicting missense variant effects. Nat Commun. 2025 Jan 02; 16(1):159.
    View in: PubMed
    Score: 0.173
  6. ShinyBioHEAT: an interactive shiny app to identify phenotype driver genes in E.coli and B.subtilis. Bioinformatics. 2023 08 01; 39(8).
    View in: PubMed
    Score: 0.156
  7. Protein function prediction: towards integration of similarity metrics. Curr Opin Struct Biol. 2011 Apr; 21(2):180-8.
    View in: PubMed
    Score: 0.066
  8. Evolutionary Trace Annotation Server: automated enzyme function prediction in protein structures using 3D templates. Bioinformatics. 2009 Jun 01; 25(11):1426-7.
    View in: PubMed
    Score: 0.058
  9. Rapid detection of similarity in protein structure and function through contact metric distances. Nucleic Acids Res. 2006; 34(22):e152.
    View in: PubMed
    Score: 0.049
  10. Evolutionary trace report_maker: a new type of service for comparative analysis of proteins. Bioinformatics. 2006 Jul 01; 22(13):1656-7.
    View in: PubMed
    Score: 0.047
  11. Correlated evolutionary pressure at interacting transcription factors and DNA response elements can guide the rational engineering of DNA binding specificity. J Mol Biol. 2005 Jul 15; 350(3):402-15.
    View in: PubMed
    Score: 0.045
  12. The MASH pipeline for protein function prediction and an algorithm for the geometric refinement of 3D motifs. J Comput Biol. 2007 Jul-Aug; 14(6):791-816.
    View in: PubMed
    Score: 0.013
  13. The structure of proteins and their binding sites: NMR and artificial intelligence. Prog Clin Biol Res. 1989; 289:145-56.
    View in: PubMed
    Score: 0.004
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.