Connection

RICHARD GIBBS to Genomics

This is a "connection" page, showing publications RICHARD GIBBS has written about Genomics.
Connection Strength

5.499
  1. The Human Genome Project changed everything. Nat Rev Genet. 2020 10; 21(10):575-576.
    View in: PubMed
    Score: 0.378
  2. ARBoR: an identity and security solution for clinical reporting. J Am Med Inform Assoc. 2019 11 01; 26(11):1370-1374.
    View in: PubMed
    Score: 0.355
  3. SVachra: a tool to identify genomic structural variation in mate pair sequencing data containing inward and outward facing reads. BMC Genomics. 2017 Oct 03; 18(Suppl 6):691.
    View in: PubMed
    Score: 0.307
  4. PacBio-LITS: a large-insert targeted sequencing method for characterization of human disease-associated chromosomal structural variations. BMC Genomics. 2015 Mar 19; 16:214.
    View in: PubMed
    Score: 0.258
  5. Comparative primate genomics: emerging patterns of genome content and dynamics. Nat Rev Genet. 2014 May; 15(5):347-59.
    View in: PubMed
    Score: 0.241
  6. Genome-sequencing anniversary. Bringing genomics and genetics back together. Science. 2011 Feb 04; 331(6017):548.
    View in: PubMed
    Score: 0.194
  7. Community annotation: procedures, protocols, and supporting tools. Genome Res. 2006 Nov; 16(11):1329-33.
    View in: PubMed
    Score: 0.144
  8. Meeting the growing demands of genetic research. J Law Med Ethics. 2006; 34(4):809-12.
    View in: PubMed
    Score: 0.136
  9. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 2004 04 01; 428(6982):493-521.
    View in: PubMed
    Score: 0.121
  10. Centers for Mendelian Genomics: A decade of facilitating gene discovery. Genet Med. 2022 04; 24(4):784-797.
    View in: PubMed
    Score: 0.104
  11. Hidden biases in germline structural variant detection. Genome Biol. 2021 12 20; 22(1):347.
    View in: PubMed
    Score: 0.103
  12. High prevalence of multilocus pathogenic variation in neurodevelopmental disorders in the Turkish population. Am J Hum Genet. 2021 10 07; 108(10):1981-2005.
    View in: PubMed
    Score: 0.101
  13. Neptune: an environment for the delivery of genomic medicine. Genet Med. 2021 10; 23(10):1838-1846.
    View in: PubMed
    Score: 0.100
  14. Genomic considerations for FHIR?; eMERGE implementation lessons. J Biomed Inform. 2021 06; 118:103795.
    View in: PubMed
    Score: 0.098
  15. Sequencing of 53,831 diverse genomes from the NHLBI TOPMed Program. Nature. 2021 Feb; 590(7845):290-299.
    View in: PubMed
    Score: 0.097
  16. Parliament2: Accurate structural variant calling at scale. Gigascience. 2020 12 21; 9(12).
    View in: PubMed
    Score: 0.096
  17. High-depth African genomes inform human migration and health. Nature. 2020 10; 586(7831):741-748.
    View in: PubMed
    Score: 0.095
  18. Cohort Profile: The Right Drug, Right Dose, Right Time: Using Genomic Data to Individualize Treatment Protocol (RIGHT Protocol). Int J Epidemiol. 2020 02 01; 49(1):23-24k.
    View in: PubMed
    Score: 0.090
  19. A Genocentric Approach to Discovery of Mendelian Disorders. Am J Hum Genet. 2019 11 07; 105(5):974-986.
    View in: PubMed
    Score: 0.089
  20. The Genomics of Arthrogryposis, a Complex Trait: Candidate Genes and Further Evidence for Oligogenic Inheritance. Am J Hum Genet. 2019 07 03; 105(1):132-150.
    View in: PubMed
    Score: 0.087
  21. The comparative genomics and complex population history of Papio baboons. Sci Adv. 2019 01; 5(1):eaau6947.
    View in: PubMed
    Score: 0.084
  22. Insights into genetics, human biology and disease gleaned from family based genomic studies. Genet Med. 2019 04; 21(4):798-812.
    View in: PubMed
    Score: 0.084
  23. Empowering genomic medicine by establishing critical sequencing result data flows: the eMERGE example. J Am Med Inform Assoc. 2018 10 01; 25(10):1375-1381.
    View in: PubMed
    Score: 0.082
  24. A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). Sci Rep. 2018 01 31; 8(1):1931.
    View in: PubMed
    Score: 0.079
  25. Lessons learned from additional research analyses of unsolved clinical exome cases. Genome Med. 2017 03 21; 9(1):26.
    View in: PubMed
    Score: 0.074
  26. Whole-genome landscape of pancreatic neuroendocrine tumours. Nature. 2017 03 02; 543(7643):65-71.
    View in: PubMed
    Score: 0.074
  27. Identification of a RAI1-associated disease network through integration of exome sequencing, transcriptomics, and 3D genomics. Genome Med. 2016 11 01; 8(1):105.
    View in: PubMed
    Score: 0.072
  28. A hybrid computational strategy to address WGS variant analysis in >5000 samples. BMC Bioinformatics. 2016 Sep 10; 17(1):361.
    View in: PubMed
    Score: 0.071
  29. Genome Sequencing of the Phytoseiid Predatory Mite Metaseiulus occidentalis Reveals Completely Atomized Hox Genes and Superdynamic Intron Evolution. Genome Biol Evol. 2016 06 27; 8(6):1762-75.
    View in: PubMed
    Score: 0.070
  30. Multilevel Genomics-Based Taxonomy of Renal Cell Carcinoma. Cell Rep. 2016 Mar 15; 14(10):2476-89.
    View in: PubMed
    Score: 0.069
  31. Genomic analyses identify molecular subtypes of pancreatic cancer. Nature. 2016 Mar 03; 531(7592):47-52.
    View in: PubMed
    Score: 0.069
  32. Whole exome sequencing identifies novel genes for fetal hemoglobin response to hydroxyurea in children with sickle cell anemia. PLoS One. 2014; 9(10):e110740.
    View in: PubMed
    Score: 0.063
  33. Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains. PLoS Biol. 2014 Aug; 12(8):e1001920.
    View in: PubMed
    Score: 0.062
  34. Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline. BMC Bioinformatics. 2014 Jan 29; 15:30.
    View in: PubMed
    Score: 0.060
  35. Genetic and molecular alterations in pancreatic cancer: implications for personalized medicine. Med Sci Monit. 2013 Oct 31; 19:916-26.
    View in: PubMed
    Score: 0.059
  36. The Centers for Mendelian Genomics: a new large-scale initiative to identify the genes underlying rare Mendelian conditions. Am J Med Genet A. 2012 Jul; 158A(7):1523-5.
    View in: PubMed
    Score: 0.053
  37. Clan genomics and the complex architecture of human disease. Cell. 2011 Sep 30; 147(1):32-43.
    View in: PubMed
    Score: 0.051
  38. A map of human genome variation from population-scale sequencing. Nature. 2010 Oct 28; 467(7319):1061-73.
    View in: PubMed
    Score: 0.048
  39. Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential. PLoS One. 2010 Aug 26; 5(8):e12411.
    View in: PubMed
    Score: 0.047
  40. Bos taurus genome assembly. BMC Genomics. 2009 Apr 24; 10:180.
    View in: PubMed
    Score: 0.043
  41. Metagenomic pyrosequencing and microbial identification. Clin Chem. 2009 May; 55(5):856-66.
    View in: PubMed
    Score: 0.042
  42. The complete genome of an individual by massively parallel DNA sequencing. Nature. 2008 Apr 17; 452(7189):872-6.
    View in: PubMed
    Score: 0.040
  43. Complete genomic characterization of global pathogens respiratory syntical virus and human norovirus using probe based capture enrichment. Sci Rep. 2025 Jul 01; 15(1):20526.
    View in: PubMed
    Score: 0.033
  44. Genomic rare variant mechanisms for congenital cardiac laterality defect: A digenic model approach. Am J Hum Genet. 2025 Jul 03; 112(7):1664-1680.
    View in: PubMed
    Score: 0.033
  45. K-mer analysis of long-read alignment pileups for structural variant genotyping. Nat Commun. 2025 Apr 04; 16(1):3218.
    View in: PubMed
    Score: 0.032
  46. The DNA sequence of the human X chromosome. Nature. 2005 Mar 17; 434(7031):325-37.
    View in: PubMed
    Score: 0.032
  47. The frequency of pathogenic variation in the All of Us cohort reveals ancestry-driven disparities. Commun Biol. 2024 02 19; 7(1):174.
    View in: PubMed
    Score: 0.030
  48. Type 2 Diabetes Modifies the Association of CAD Genomic Risk Variants With Subclinical Atherosclerosis. Circ Genom Precis Med. 2023 12; 16(6):e004176.
    View in: PubMed
    Score: 0.029
  49. The genomic landscape of familial glioma. Sci Adv. 2023 04 28; 9(17):eade2675.
    View in: PubMed
    Score: 0.028
  50. Familial Hypercholesterolemia in the Electronic Medical Records and Genomics Network: Prevalence, Penetrance, Cardiovascular Risk, and Outcomes After Return of Results. Circ Genom Precis Med. 2023 04; 16(2):e003816.
    View in: PubMed
    Score: 0.028
  51. A reverse genetics and genomics approach to gene paralog function and disease: Myokymia and the juxtaparanode. Am J Hum Genet. 2022 09 01; 109(9):1713-1723.
    View in: PubMed
    Score: 0.027
  52. Whole-genome sequencing as an investigational device for return of hereditary disease risk and pharmacogenomic results as part of the All of Us Research Program. Genome Med. 2022 03 28; 14(1):34.
    View in: PubMed
    Score: 0.026
  53. Fully resolved assembly of Cryptosporidium parvum. Gigascience. 2022 02 15; 11.
    View in: PubMed
    Score: 0.026
  54. The Earth BioGenome Project 2020: Starting the clock. Proc Natl Acad Sci U S A. 2022 01 25; 119(4).
    View in: PubMed
    Score: 0.026
  55. Harmonizing variant classification for return of results in the All of Us Research Program. Hum Mutat. 2022 08; 43(8):1114-1121.
    View in: PubMed
    Score: 0.026
  56. Leveraging Human Microbiome Features to Diagnose and Stratify Children with Irritable Bowel Syndrome. J Mol Diagn. 2019 05; 21(3):449-461.
    View in: PubMed
    Score: 0.021
  57. Genetic architecture of laterality defects revealed by whole exome sequencing. Eur J Hum Genet. 2019 04; 27(4):563-573.
    View in: PubMed
    Score: 0.021
  58. The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water. BMC Genomics. 2018 Nov 21; 19(1):832.
    View in: PubMed
    Score: 0.021
  59. Comparative genomics of the miniature wasp and pest control agent Trichogramma pretiosum. BMC Biol. 2018 05 18; 16(1):54.
    View in: PubMed
    Score: 0.020
  60. Sooty mangabey genome sequence provides insight into AIDS resistance in a natural SIV host. Nature. 2018 01 03; 553(7686):77-81.
    View in: PubMed
    Score: 0.020
  61. Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species. BMC Biol. 2017 07 31; 15(1):63.
    View in: PubMed
    Score: 0.019
  62. Practical Approaches for Whole-Genome Sequence Analysis of Heart- and Blood-Related Traits. Am J Hum Genet. 2017 02 02; 100(2):205-215.
    View in: PubMed
    Score: 0.018
  63. Primary immunodeficiency diseases: Genomic approaches delineate heterogeneous Mendelian disorders. J Allergy Clin Immunol. 2017 01; 139(1):232-245.
    View in: PubMed
    Score: 0.018
  64. Genome-culture coevolution promotes rapid divergence of killer whale ecotypes. Nat Commun. 2016 05 31; 7:11693.
    View in: PubMed
    Score: 0.018
  65. DNAism: exploring genomic datasets on the web with Horizon Charts. BMC Bioinformatics. 2016 Jan 27; 17:49.
    View in: PubMed
    Score: 0.017
  66. Comparative genomic study of arachnid immune systems indicates loss of beta-1,3-glucanase-related proteins and the?immune deficiency pathway. J Evol Biol. 2016 Feb; 29(2):277-91.
    View in: PubMed
    Score: 0.017
  67. Genomic profiling of S?zary syndrome identifies alterations of key T cell signaling and differentiation genes. Nat Genet. 2015 Dec; 47(12):1426-34.
    View in: PubMed
    Score: 0.017
  68. An integrated map of structural variation in 2,504 human genomes. Nature. 2015 Oct 01; 526(7571):75-81.
    View in: PubMed
    Score: 0.017
  69. Genomic signatures of cooperation and conflict in the social amoeba. Curr Biol. 2015 Jun 15; 25(12):1661-5.
    View in: PubMed
    Score: 0.016
  70. The genomes of two key bumblebee species with primitive eusocial organization. Genome Biol. 2015 Apr 24; 16:76.
    View in: PubMed
    Score: 0.016
  71. Identifying gene disruptions in novel balanced de novo constitutional translocations in childhood cancer patients by whole-genome sequencing. Genet Med. 2015 Oct; 17(10):831-5.
    View in: PubMed
    Score: 0.016
  72. Molecular findings among patients referred for clinical whole-exome sequencing. JAMA. 2014 Nov 12; 312(18):1870-9.
    View in: PubMed
    Score: 0.016
  73. Mutational landscape of aggressive cutaneous squamous cell carcinoma. Clin Cancer Res. 2014 Dec 15; 20(24):6582-92.
    View in: PubMed
    Score: 0.016
  74. Sequence variation in TMEM18 in association with body mass index: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study. Circ Cardiovasc Genet. 2014 Jun; 7(3):344-9.
    View in: PubMed
    Score: 0.015
  75. ADAM19 and HTR4 variants and pulmonary function: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study. Circ Cardiovasc Genet. 2014 Jun; 7(3):350-8.
    View in: PubMed
    Score: 0.015
  76. Sequencing of 2 subclinical atherosclerosis candidate regions in 3669 individuals: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study. Circ Cardiovasc Genet. 2014 Jun; 7(3):359-64.
    View in: PubMed
    Score: 0.015
  77. Sequencing of SCN5A identifies rare and common variants associated with cardiac conduction: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium. Circ Cardiovasc Genet. 2014 Jun; 7(3):365-73.
    View in: PubMed
    Score: 0.015
  78. Association of levels of fasting glucose and insulin with rare variants at the chromosome 11p11.2-MADD locus: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study. Circ Cardiovasc Genet. 2014 Jun; 7(3):374-382.
    View in: PubMed
    Score: 0.015
  79. Integrative annotation of variants from 1092 humans: application to cancer genomics. Science. 2013 Oct 04; 342(6154):1235587.
    View in: PubMed
    Score: 0.015
  80. Whole-genome sequence-based analysis of high-density lipoprotein cholesterol. Nat Genet. 2013 Aug; 45(8):899-901.
    View in: PubMed
    Score: 0.014
  81. Integrative genomic characterization of oral squamous cell carcinoma identifies frequent somatic drivers. Cancer Discov. 2013 Jul; 3(7):770-81.
    View in: PubMed
    Score: 0.014
  82. Identification of genetic risk variants for deep vein thrombosis by multiplexed next-generation sequencing of 186 hemostatic/pro-inflammatory genes. BMC Med Genomics. 2012 Feb 21; 5:7.
    View in: PubMed
    Score: 0.013
  83. An integrative variant analysis suite for whole exome next-generation sequencing data. BMC Bioinformatics. 2012 Jan 12; 13:8.
    View in: PubMed
    Score: 0.013
  84. Demographic history and rare allele sharing among human populations. Proc Natl Acad Sci U S A. 2011 Jul 19; 108(29):11983-8.
    View in: PubMed
    Score: 0.012
  85. Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF. Genome Biol. 2008; 9(7):R110.
    View in: PubMed
    Score: 0.010
  86. What everybody should know about the rat genome and its online resources. Nat Genet. 2008 May; 40(5):523-7.
    View in: PubMed
    Score: 0.010
  87. Characterizing the cancer genome in lung adenocarcinoma. Nature. 2007 Dec 06; 450(7171):893-8.
    View in: PubMed
    Score: 0.010
  88. Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects. Genome Res. 2006 Nov; 16(11):1334-8.
    View in: PubMed
    Score: 0.009
  89. Sweetness and light: illuminating the honey bee genome. Insect Mol Biol. 2006 Oct; 15(5):535-9.
    View in: PubMed
    Score: 0.009
  90. Complete genome sequence of Rickettsia typhi and comparison with sequences of other rickettsiae. J Bacteriol. 2004 Sep; 186(17):5842-55.
    View in: PubMed
    Score: 0.008
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.