Connection

JOSEPH PETROSINO to Humans

This is a "connection" page, showing publications JOSEPH PETROSINO has written about Humans.
Connection Strength

0.975
  1. Longitudinal phage-bacteria dynamics in the early life gut microbiome. Nat Microbiol. 2025 Feb; 10(2):420-430.
    View in: PubMed
    Score: 0.025
  2. A novel system to culture human intestinal organoids under physiological oxygen content to study microbial-host interaction. PLoS One. 2024; 19(7):e0300666.
    View in: PubMed
    Score: 0.024
  3. Transmission event of SARS-CoV-2 delta variant reveals multiple vaccine breakthrough infections. BMC Med. 2021 10 01; 19(1):255.
    View in: PubMed
    Score: 0.020
  4. Spatial Characteristics of Colonic Mucosa-Associated Gut Microbiota in Humans. Microb Ecol. 2022 Apr; 83(3):811-821.
    View in: PubMed
    Score: 0.019
  5. A study of innate immune kinetics reveals a role for a chloride transporter in a virulent Francisella tularensis type B strain. Microbiologyopen. 2021 02; 10(2):e1170.
    View in: PubMed
    Score: 0.019
  6. The gut microbiota is associated with psychiatric symptom severity and treatment outcome among individuals with serious mental illness. J Affect Disord. 2020 03 01; 264:98-106.
    View in: PubMed
    Score: 0.017
  7. Exploration of the Vaginal and Gut Microbiome in African American Women by Body Mass Index, Class of Obesity, and Gestational Weight Gain: A Pilot Study. Am J Perinatol. 2020 09; 37(11):1160-1172.
    View in: PubMed
    Score: 0.017
  8. Maximal viral information recovery from sequence data using VirMAP. Nat Commun. 2018 08 10; 9(1):3205.
    View in: PubMed
    Score: 0.016
  9. Investigating Colonization of the Healthy Adult Gastrointestinal Tract by Fungi. mSphere. 2018 Mar-Apr; 3(2).
    View in: PubMed
    Score: 0.015
  10. The microbiome in precision medicine: the way forward. Genome Med. 2018 02 22; 10(1):12.
    View in: PubMed
    Score: 0.015
  11. Challenges of Francisella classification exemplified by an atypical clinical isolate. Diagn Microbiol Infect Dis. 2018 Apr; 90(4):241-247.
    View in: PubMed
    Score: 0.015
  12. The gut mycobiome of the Human Microbiome Project healthy cohort. Microbiome. 2017 Nov 25; 5(1):153.
    View in: PubMed
    Score: 0.015
  13. Development of the cutaneous microbiome in the preterm infant: A prospective longitudinal study. PLoS One. 2017; 12(4):e0176669.
    View in: PubMed
    Score: 0.014
  14. Isolation and concentration of bacteria from blood using microfluidic membraneless dialysis and dielectrophoresis. Lab Chip. 2017 03 29; 17(7):1340-1348.
    View in: PubMed
    Score: 0.014
  15. Microbiome-Epigenome Interactions and the Environmental Origins of Inflammatory Bowel Diseases. J Pediatr Gastroenterol Nutr. 2016 Feb; 62(2):208-19.
    View in: PubMed
    Score: 0.013
  16. Promise and Pragmatism in Clinical Microbiome Research. Mini Rev Med Chem. 2015; 16(3):222-4.
    View in: PubMed
    Score: 0.012
  17. Fecal microbiota imbalance in Mexican children with type 1 diabetes. Sci Rep. 2014 Jan 22; 4:3814.
    View in: PubMed
    Score: 0.012
  18. The living dead: bacterial community structure of a cadaver at the onset and end of the bloat stage of decomposition. PLoS One. 2013; 8(10):e77733.
    View in: PubMed
    Score: 0.011
  19. Identification of novel and cross-species seroreactive proteins from Bacillus anthracis using a ligation-independent cloning-based, SOS-inducible expression system. Microb Pathog. 2012 Nov-Dec; 53(5-6):250-8.
    View in: PubMed
    Score: 0.011
  20. Metagenomic pyrosequencing and microbial identification. Clin Chem. 2009 May; 55(5):856-66.
    View in: PubMed
    Score: 0.008
  21. Francisella tularensis genomics and proteomics. Ann N Y Acad Sci. 2007 Jun; 1105:98-121.
    View in: PubMed
    Score: 0.007
  22. Menopause factors and alterations in gut microbiota and insulin homeostasis: A cross-sectional analysis of the microbiome and insulin longitudinal evaluation study (MILES). Diabetes Obes Metab. 2025 Oct; 27(10):5444-5454.
    View in: PubMed
    Score: 0.006
  23. Complete genomic characterization of global pathogens respiratory syntical virus and human norovirus using probe based capture enrichment. Sci Rep. 2025 Jul 01; 15(1):20526.
    View in: PubMed
    Score: 0.006
  24. Comparative effects of combustible cigarette versus electronic cigarette exposures on KRAS mutant lung cancer promotion. Neoplasia. 2025 09; 67:101185.
    View in: PubMed
    Score: 0.006
  25. Sequencing-Based Detection of Measles in Wastewater: Texas, January 2025. Am J Public Health. 2025 Jul; 115(7):1115-1119.
    View in: PubMed
    Score: 0.006
  26. Relationships of Personality Traits With the Taxonomic Composition of the Gut Microbiome Among Psychiatric Inpatients. J Neuropsychiatry Clin Neurosci. 2025; 37(4):349-358.
    View in: PubMed
    Score: 0.006
  27. Joint analysis of the nPOD-Virus Group data: the association of enterovirus with type 1 diabetes is supported by multiple markers of infection in pancreas tissue. Diabetologia. 2025 Jun; 68(6):1226-1241.
    View in: PubMed
    Score: 0.006
  28. Detection of enterovirus RNA in pancreas and lymphoid tissues of organ donors with type 1 diabetes. Diabetologia. 2025 Jun; 68(6):1211-1225.
    View in: PubMed
    Score: 0.006
  29. Bile acid and microbiome interactions in the developing child. J Pediatr Gastroenterol Nutr. 2025 May; 80(5):832-839.
    View in: PubMed
    Score: 0.006
  30. Dairy Consumption and the Colonic Mucosa-Associated Gut Microbiota in Humans-A Preliminary Investigation. Nutrients. 2025 Feb 02; 17(3).
    View in: PubMed
    Score: 0.006
  31. Gut Microbial Changes Associated With Obesity in Youth With Type 1 Diabetes. J Clin Endocrinol Metab. 2025 Jan 21; 110(2):364-373.
    View in: PubMed
    Score: 0.006
  32. Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load. PLoS One. 2025; 20(1):e0317033.
    View in: PubMed
    Score: 0.006
  33. Inflammation Mediated by Gut Microbiome Alterations Promotes Lung Cancer Development and an Immunosuppressed Tumor Microenvironment. Cancer Immunol Res. 2024 Dec 03; 12(12):1736-1752.
    View in: PubMed
    Score: 0.006
  34. Sequencing-Based Detection of Avian Influenza A(H5N1) Virus in Wastewater in Ten Cities. N Engl J Med. 2024 09 26; 391(12):1157-1159.
    View in: PubMed
    Score: 0.006
  35. Analytical challenges in omics research on asthma and allergy: A?National Institute of Allergy and Infectious Diseases workshop. J Allergy Clin Immunol. 2024 Apr; 153(4):954-968.
    View in: PubMed
    Score: 0.006
  36. Gut epithelial Interleukin-17 receptor A signaling can modulate distant tumors growth through microbial regulation. Cancer Cell. 2024 01 08; 42(1):85-100.e6.
    View in: PubMed
    Score: 0.006
  37. C-Reactive Protein Levels Correlate with Measures of Dysglycemia and Gut Microbiome Profiles. Curr Microbiol. 2023 Dec 21; 81(1):45.
    View in: PubMed
    Score: 0.006
  38. Modulating a prebiotic food source influences inflammation and immune-regulating gut microbes and metabolites: insights from the BE GONE trial. EBioMedicine. 2023 Dec; 98:104873.
    View in: PubMed
    Score: 0.006
  39. Distinct transcriptomic profiles in children prior to the appearance of type 1 diabetes-linked islet autoantibodies and following enterovirus infection. Nat Commun. 2023 11 22; 14(1):7630.
    View in: PubMed
    Score: 0.006
  40. Gastrointestinal Infections Modulate the Risk for Insulin Autoantibodies as the First-Appearing Autoantibody in the TEDDY Study. Diabetes Care. 2023 11 01; 46(11):1908-1915.
    View in: PubMed
    Score: 0.006
  41. Wastewater sequencing reveals community and variant dynamics of the collective human virome. Nat Commun. 2023 10 28; 14(1):6878.
    View in: PubMed
    Score: 0.006
  42. Tumor-resident Lactobacillus iners confer chemoradiation resistance through lactate-induced metabolic rewiring. Cancer Cell. 2023 11 13; 41(11):1945-1962.e11.
    View in: PubMed
    Score: 0.006
  43. The Association between Caffeine Intake and the Colonic Mucosa-Associated Gut Microbiota in Humans-A Preliminary Investigation. Nutrients. 2023 Apr 03; 15(7).
    View in: PubMed
    Score: 0.005
  44. Wastewater pandemic preparedness: Toward an end-to-end pathogen monitoring program. Front Public Health. 2023; 11:1137881.
    View in: PubMed
    Score: 0.005
  45. History of childhood physical abuse is associated with gut microbiota diversity among adult psychiatric inpatients. J Affect Disord. 2023 06 15; 331:50-56.
    View in: PubMed
    Score: 0.005
  46. Assessment of a SARS-CoV-2 wastewater monitoring program in El Paso, Texas, from November 2020 to June 2022. Int J Environ Health Res. 2024 Jan; 34(1):564-574.
    View in: PubMed
    Score: 0.005
  47. Functional response to a microbial synbiotic in the gastrointestinal system of children: a randomized clinical trial. Pediatr Res. 2023 Jun; 93(7):2005-2013.
    View in: PubMed
    Score: 0.005
  48. Butyrate-Producing Bacteria and Insulin Homeostasis: The Microbiome and Insulin Longitudinal Evaluation Study (MILES). Diabetes. 2022 11 01; 71(11):2438-2446.
    View in: PubMed
    Score: 0.005
  49. Progressive reduction in circulating levels of carotenoids and other micronutrients in patients with chronic pancreatitis. Pancreatology. 2022 Dec; 22(8):1126-1133.
    View in: PubMed
    Score: 0.005
  50. Pathogenesis of Tobacco-Associated Lung Adenocarcinoma Is Closely Coupled with Changes in the Gut and Lung Microbiomes. Int J Mol Sci. 2022 Sep 18; 23(18).
    View in: PubMed
    Score: 0.005
  51. Differential co-expression networks of the gut microbiota are associated with depression and anxiety treatment resistance among psychiatric inpatients. Prog Neuropsychopharmacol Biol Psychiatry. 2023 01 10; 120:110638.
    View in: PubMed
    Score: 0.005
  52. Metagenomes of rectal swabs in larger, advanced stage cervical cancers have enhanced mucus degrading functionalities and distinct taxonomic structure. BMC Cancer. 2022 Sep 01; 22(1):945.
    View in: PubMed
    Score: 0.005
  53. Salivary Biomarker Evaluation of Chronic Pancreatitis Patients Reveals Alterations in Human Proteins, Cytokines, Prostaglandin E2 Levels, and Bacterial Diversity. Pancreas. 2022 08 01; 51(7):723-732.
    View in: PubMed
    Score: 0.005
  54. Dietary Fatty Acid Intake and the Colonic Gut Microbiota in Humans. Nutrients. 2022 Jun 29; 14(13).
    View in: PubMed
    Score: 0.005
  55. Temporal changes in gastrointestinal fungi and the risk of autoimmunity during early childhood: the TEDDY study. Nat Commun. 2022 06 07; 13(1):3151.
    View in: PubMed
    Score: 0.005
  56. Microbiome Dynamics During Chemoradiation Therapy for Anal Cancer. Int J Radiat Oncol Biol Phys. 2022 08 01; 113(5):974-984.
    View in: PubMed
    Score: 0.005
  57. Multiple Respiratory Syncytial Virus (RSV) Strains Infecting HEp-2 and A549 Cells Reveal Cell Line-Dependent Differences in Resistance to RSV Infection. J Virol. 2022 04 13; 96(7):e0190421.
    View in: PubMed
    Score: 0.005
  58. Fully resolved assembly of Cryptosporidium parvum. Gigascience. 2022 02 15; 11.
    View in: PubMed
    Score: 0.005
  59. Age-Associated Gut Dysbiosis, Marked by Loss of Butyrogenic Potential, Correlates With Altered Plasma Tryptophan Metabolites in Older People Living With HIV. J Acquir Immune Defic Syndr. 2022 02 01; 89(Suppl 1):S56-S64.
    View in: PubMed
    Score: 0.005
  60. Dietary fiber and probiotics influence the gut microbiome and melanoma immunotherapy response. Science. 2021 Dec 24; 374(6575):1632-1640.
    View in: PubMed
    Score: 0.005
  61. The impact of the Th17:Treg axis on the IgA-Biome across the glycemic spectrum. PLoS One. 2021; 16(10):e0258812.
    View in: PubMed
    Score: 0.005
  62. Drivers of transcriptional variance in human intestinal epithelial organoids. Physiol Genomics. 2021 11 01; 53(11):486-508.
    View in: PubMed
    Score: 0.005
  63. Urinary Tract Infections in Children with Vesicoureteral Reflux Are Accompanied by Alterations in Urinary Microbiota and Metabolome Profiles. Eur Urol. 2022 02; 81(2):151-154.
    View in: PubMed
    Score: 0.005
  64. Exploration of Diet Quality by Obesity Severity in Association with Gestational Weight Gain and Distal Gut Microbiota in Pregnant African American Women: Opportunities for Intervention. Matern Child Health J. 2022 Apr; 26(4):882-894.
    View in: PubMed
    Score: 0.005
  65. Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals. PLoS One. 2021; 16(8):e0244468.
    View in: PubMed
    Score: 0.005
  66. Gut microbiota signatures are associated with toxicity to combined CTLA-4 and PD-1 blockade. Nat Med. 2021 08; 27(8):1432-1441.
    View in: PubMed
    Score: 0.005
  67. Diversity and composition of gut microbiome of cervical cancer patients: Do results of 16S rRNA sequencing and whole genome sequencing approaches align? J Microbiol Methods. 2021 06; 185:106213.
    View in: PubMed
    Score: 0.005
  68. Gut microbiome diversity is an independent predictor of survival in cervical cancer patients receiving chemoradiation. Commun Biol. 2021 02 22; 4(1):237.
    View in: PubMed
    Score: 0.005
  69. Gut Microbiome Profiles and Associated Metabolic Pathways in HIV-Infected Treatment-Na?ve Patients. Cells. 2021 02 13; 10(2).
    View in: PubMed
    Score: 0.005
  70. Oral insulin immunotherapy in children at risk for type 1 diabetes in a randomised controlled trial. Diabetologia. 2021 05; 64(5):1079-1092.
    View in: PubMed
    Score: 0.005
  71. Houston hurricane Harvey health (Houston-3H) study: assessment of allergic symptoms and stress after hurricane Harvey flooding. Environ Health. 2021 01 19; 20(1):9.
    View in: PubMed
    Score: 0.005
  72. A type VII secretion system of Streptococcus gallolyticus subsp. gallolyticus contributes to gut colonization and the development of colon tumors. PLoS Pathog. 2021 01; 17(1):e1009182.
    View in: PubMed
    Score: 0.005
  73. Microbiome for Mars: surveying microbiome connections to healthcare with implications for long-duration human spaceflight, virtual workshop, July 13, 2020. Microbiome. 2021 01 04; 9(1):2.
    View in: PubMed
    Score: 0.005
  74. Decrease in acetyl-CoA pathway utilizing butyrate-producing bacteria is a key pathogenic feature of alcohol-induced functional gut microbial dysbiosis and development of liver disease in mice. Gut Microbes. 2021 Jan-Dec; 13(1):1946367.
    View in: PubMed
    Score: 0.005
  75. Human milk oligosaccharide DSLNT and gut microbiome in preterm infants predicts necrotising enterocolitis. Gut. 2021 12; 70(12):2273-2282.
    View in: PubMed
    Score: 0.005
  76. Fructan-sensitive children with irritable bowel syndrome have distinct gut microbiome signatures. Aliment Pharmacol Ther. 2021 02; 53(4):499-509.
    View in: PubMed
    Score: 0.005
  77. Baseline Oral Microbiome and All-cancer Incidence in a Cohort of Nonsmoking Mexican American Women. Cancer Prev Res (Phila). 2021 03; 14(3):383-392.
    View in: PubMed
    Score: 0.005
  78. Metagenomic Information Recovery from Human Stool Samples Is Influenced by Sequencing Depth and Profiling Method. Genes (Basel). 2020 11 21; 11(11).
    View in: PubMed
    Score: 0.005
  79. Impact of Diabetes on the Gut and Salivary IgA Microbiomes. Infect Immun. 2020 11 16; 88(12).
    View in: PubMed
    Score: 0.005
  80. Enteroaggregative E. coli Adherence to Human Heparan Sulfate Proteoglycans Drives Segment and Host Specific Responses to Infection. PLoS Pathog. 2020 09; 16(9):e1008851.
    View in: PubMed
    Score: 0.005
  81. Oral Health and the Altered Colonic Mucosa-Associated Gut Microbiota. Dig Dis Sci. 2021 09; 66(9):2981-2991.
    View in: PubMed
    Score: 0.005
  82. Alcohol use alters the colonic mucosa-associated gut microbiota in humans. Nutr Res. 2020 11; 83:119-128.
    View in: PubMed
    Score: 0.005
  83. Longitudinal Changes in Early Nasal Microbiota and the Risk of Childhood Asthma. Pediatrics. 2020 10; 146(4).
    View in: PubMed
    Score: 0.005
  84. Rationale, design and baseline characteristics of the Microbiome and Insulin Longitudinal Evaluation Study (MILES). Diabetes Obes Metab. 2020 11; 22(11):1976-1984.
    View in: PubMed
    Score: 0.005
  85. Tumor microbial diversity and compositional differences among women in Botswana with high-grade cervical dysplasia and cervical cancer. Int J Gynecol Cancer. 2020 08; 30(8):1151-1156.
    View in: PubMed
    Score: 0.005
  86. The Fecal Microbiome in Infants With Biliary Atresia Associates With Bile Flow After Kasai Portoenterostomy. J Pediatr Gastroenterol Nutr. 2020 06; 70(6):789-795.
    View in: PubMed
    Score: 0.004
  87. Dietary inflammatory potential in relation to the gut microbiome: results from a cross-sectional study. Br J Nutr. 2020 11 14; 124(9):931-942.
    View in: PubMed
    Score: 0.004
  88. Comparison of Methods To Collect Fecal Samples for Microbiome Studies Using Whole-Genome Shotgun Metagenomic Sequencing. mSphere. 2020 02 26; 5(1).
    View in: PubMed
    Score: 0.004
  89. Intermittent fasting from dawn to sunset for 30 consecutive days is associated with anticancer proteomic signature and upregulates key regulatory proteins of glucose and lipid metabolism, circadian clock, DNA repair, cytoskeleton remodeling, immune system and cognitive function in healthy subjects. J Proteomics. 2020 04 15; 217:103645.
    View in: PubMed
    Score: 0.004
  90. The BE GONE trial study protocol: a randomized crossover dietary intervention of dry beans targeting the gut microbiome of overweight and obese patients with a history of colorectal polyps or cancer. BMC Cancer. 2019 Dec 18; 19(1):1233.
    View in: PubMed
    Score: 0.004
  91. Fungal cutaneous microbiome and host determinants in preterm and term neonates. Pediatr Res. 2020 08; 88(2):225-233.
    View in: PubMed
    Score: 0.004
  92. Prospective virome analyses in young children at increased genetic risk for type 1 diabetes. Nat Med. 2019 12; 25(12):1865-1872.
    View in: PubMed
    Score: 0.004
  93. Metagenomics of the faecal virome indicate a cumulative effect of enterovirus and gluten amount on the risk of coeliac disease autoimmunity in genetically at risk children: the TEDDY study. Gut. 2020 08; 69(8):1416-1422.
    View in: PubMed
    Score: 0.004
  94. Increased Moraxella and Streptococcus species abundance after severe bronchiolitis is associated with recurrent wheezing. J Allergy Clin Immunol. 2020 02; 145(2):518-527.e8.
    View in: PubMed
    Score: 0.004
  95. Dietary quality and the colonic mucosa-associated gut microbiome in humans. Am J Clin Nutr. 2019 09 01; 110(3):701-712.
    View in: PubMed
    Score: 0.004
  96. Tumor Microbiome Diversity and Composition Influence Pancreatic Cancer Outcomes. Cell. 2019 08 08; 178(4):795-806.e12.
    View in: PubMed
    Score: 0.004
  97. Insular resting state functional connectivity is associated with gut microbiota diversity. Eur J Neurosci. 2019 08; 50(3):2446-2452.
    View in: PubMed
    Score: 0.004
  98. Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases. Nature. 2019 05; 569(7758):655-662.
    View in: PubMed
    Score: 0.004
  99. Serum Metabolome Is Associated With the Nasopharyngeal Microbiota and Disease Severity Among Infants With Bronchiolitis. J Infect Dis. 2019 05 24; 219(12):2005-2014.
    View in: PubMed
    Score: 0.004
  100. Early nasal microbiota and acute respiratory infections during the first years of life. Thorax. 2019 06; 74(6):592-599.
    View in: PubMed
    Score: 0.004
  101. Haemophilus-Dominant Nasopharyngeal Microbiota Is Associated With Delayed Clearance of Respiratory Syncytial Virus in Infants Hospitalized for Bronchiolitis. J Infect Dis. 2019 05 05; 219(11):1804-1808.
    View in: PubMed
    Score: 0.004
  102. Leveraging Human Microbiome Features to Diagnose and Stratify Children with Irritable Bowel Syndrome. J Mol Diagn. 2019 05; 21(3):449-461.
    View in: PubMed
    Score: 0.004
  103. Dietary Nutrients Involved in One-Carbon Metabolism and Colonic Mucosa-Associated Gut Microbiome in Individuals with an Endoscopically Normal Colon. Nutrients. 2019 Mar 13; 11(3).
    View in: PubMed
    Score: 0.004
  104. Using formalin fixed paraffin embedded tissue to characterize the preterm gut microbiota in necrotising enterocolitis and spontaneous isolated perforation using marginal and diseased tissue. BMC Microbiol. 2019 03 04; 19(1):52.
    View in: PubMed
    Score: 0.004
  105. Frequency of Tongue Cleaning Impacts the Human Tongue Microbiome Composition and Enterosalivary Circulation of Nitrate. Front Cell Infect Microbiol. 2019; 9:39.
    View in: PubMed
    Score: 0.004
  106. Human milk oligosaccharides, milk microbiome and infant gut microbiome modulate neonatal rotavirus infection. Nat Commun. 2018 11 27; 9(1):5010.
    View in: PubMed
    Score: 0.004
  107. Circulating 25-hydroxyvitamin D, nasopharyngeal microbiota, and bronchiolitis severity. Pediatr Allergy Immunol. 2018 12; 29(8):877-880.
    View in: PubMed
    Score: 0.004
  108. Safety and preliminary efficacy of orally administered lyophilized fecal microbiota product compared with frozen product given by enema for recurrent Clostridium difficile infection: A randomized clinical trial. PLoS One. 2018; 13(11):e0205064.
    View in: PubMed
    Score: 0.004
  109. The human gut microbiome in early-onset type 1 diabetes from the TEDDY study. Nature. 2018 10; 562(7728):589-594.
    View in: PubMed
    Score: 0.004
  110. Temporal development of the gut microbiome in early childhood from the TEDDY study. Nature. 2018 10; 562(7728):583-588.
    View in: PubMed
    Score: 0.004
  111. Oral microbiota reveals signs of acculturation in Mexican American women. PLoS One. 2018; 13(4):e0194100.
    View in: PubMed
    Score: 0.004
  112. A Lachnospiraceae-dominated bacterial signature in the fecal microbiota of HIV-infected individuals from Colombia, South America. Sci Rep. 2018 03 14; 8(1):4479.
    View in: PubMed
    Score: 0.004
  113. Respiratory Syncytial Virus and Rhinovirus Bronchiolitis Are Associated With Distinct Metabolic Pathways. J Infect Dis. 2018 03 13; 217(7):1160-1169.
    View in: PubMed
    Score: 0.004
  114. Influence of fecal collection conditions and 16S rRNA gene sequencing at two centers on human gut microbiota analysis. Sci Rep. 2018 03 12; 8(1):4386.
    View in: PubMed
    Score: 0.004
  115. Arginine Metabolism Is Altered in Adults with A-?+?Ketosis-Prone Diabetes. J Nutr. 2018 02 01; 148(2):185-193.
    View in: PubMed
    Score: 0.004
  116. The association between anterior nares and nasopharyngeal microbiota in infants hospitalized for bronchiolitis. Microbiome. 2018 01 03; 6(1):2.
    View in: PubMed
    Score: 0.004
  117. Gut microbiome modulates response to anti-PD-1 immunotherapy in melanoma patients. Science. 2018 01 05; 359(6371):97-103.
    View in: PubMed
    Score: 0.004
  118. Nasal Airway Microbiota Profile and Severe Bronchiolitis in Infants: A Case-control Study. Pediatr Infect Dis J. 2017 Nov; 36(11):1044-1051.
    View in: PubMed
    Score: 0.004
  119. Association of Maternal Gestational Weight Gain With the Infant Fecal Microbiota. J Pediatr Gastroenterol Nutr. 2017 11; 65(5):509-515.
    View in: PubMed
    Score: 0.004
  120. Associations of Nasopharyngeal Metabolome and Microbiome with Severity among Infants with Bronchiolitis. A Multiomic Analysis. Am J Respir Crit Care Med. 2017 10 01; 196(7):882-891.
    View in: PubMed
    Score: 0.004
  121. Serum LL-37 Levels Associated With Severity of Bronchiolitis and Viral Etiology. Clin Infect Dis. 2017 Sep 15; 65(6):967-975.
    View in: PubMed
    Score: 0.004
  122. Sphingolipid metabolism potential in fecal microbiome and bronchiolitis in infants: a case-control study. BMC Res Notes. 2017 Jul 26; 10(1):325.
    View in: PubMed
    Score: 0.004
  123. Impact of environmental microbiota on human microbiota of workers in academic mouse research facilities: An observational study. PLoS One. 2017; 12(7):e0180969.
    View in: PubMed
    Score: 0.004
  124. Longitudinal development of the gut microbiome and metabolome in preterm neonates with late onset sepsis and healthy controls. Microbiome. 2017 07 12; 5(1):75.
    View in: PubMed
    Score: 0.004
  125. Single Delivery of High-Diversity Fecal Microbiota Preparation by Colonoscopy Is Safe and Effective in Increasing Microbial Diversity in Active Ulcerative Colitis. Inflamm Bowel Dis. 2017 06; 23(6):903-911.
    View in: PubMed
    Score: 0.004
  126. Fusobacterium Nucleatum Subspecies Animalis Influences Proinflammatory Cytokine Expression and Monocyte Activation in Human Colorectal Tumors. Cancer Prev Res (Phila). 2017 Jul; 10(7):398-409.
    View in: PubMed
    Score: 0.004
  127. The relationship between nasopharyngeal CCL5 and microbiota on disease severity among infants with bronchiolitis. Allergy. 2017 Nov; 72(11):1796-1800.
    View in: PubMed
    Score: 0.004
  128. Characterization of oral and gut microbiome temporal variability in hospitalized cancer patients. Genome Med. 2017 02 28; 9(1):21.
    View in: PubMed
    Score: 0.004
  129. Randomised clinical trial: faecal microbiota transplantation for recurrent Clostridum difficile infection - fresh, or frozen, or lyophilised microbiota from a small pool of healthy donors delivered by colonoscopy. Aliment Pharmacol Ther. 2017 04; 45(7):899-908.
    View in: PubMed
    Score: 0.004
  130. IgA-coated E. coli enriched in Crohn's disease spondyloarthritis promote TH17-dependent inflammation. Sci Transl Med. 2017 02 08; 9(376).
    View in: PubMed
    Score: 0.004
  131. Gut microbiota as a source of a surrogate antigen that triggers autoimmunity in an immune privileged site. Gut Microbes. 2017 01 02; 8(1):59-66.
    View in: PubMed
    Score: 0.004
  132. Conjunctival Microbiome Changes Associated With Soft Contact Lens and Orthokeratology Lens Wearing. Invest Ophthalmol Vis Sci. 2017 01 01; 58(1):128-136.
    View in: PubMed
    Score: 0.004
  133. Temporal bacterial and metabolic development of the preterm gut reveals specific signatures in health and disease. Microbiome. 2016 Dec 29; 4(1):67.
    View in: PubMed
    Score: 0.004
  134. Household siblings and nasal and fecal microbiota in infants. Pediatr Int. 2017 Apr; 59(4):473-481.
    View in: PubMed
    Score: 0.004
  135. Serum cathelicidin, nasopharyngeal microbiota, and disease severity among infants hospitalized with bronchiolitis. J Allergy Clin Immunol. 2017 04; 139(4):1383-1386.e6.
    View in: PubMed
    Score: 0.004
  136. Middle ear microbiome differences in indigenous Filipinos with chronic otitis media due to a duplication in the A2ML1 gene. Infect Dis Poverty. 2016 Nov 01; 5(1):97.
    View in: PubMed
    Score: 0.004
  137. Association of nasopharyngeal microbiota profiles with bronchiolitis severity in infants hospitalised for bronchiolitis. Eur Respir J. 2016 11; 48(5):1329-1339.
    View in: PubMed
    Score: 0.003
  138. Universal microbial diagnostics using random DNA probes. Sci Adv. 2016 09; 2(9):e1600025.
    View in: PubMed
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  139. Gut Microbiome Associates With Lifetime Cardiovascular Disease Risk Profile Among Bogalusa Heart Study Participants. Circ Res. 2016 Sep 30; 119(8):956-64.
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  140. Genetic and Environmental Determinants of Otitis Media in an Indigenous Filipino Population. Otolaryngol Head Neck Surg. 2016 11; 155(5):856-862.
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  141. The Fecal Microbiota Profile and Bronchiolitis in Infants. Pediatrics. 2016 07; 138(1).
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  142. The role of the gastrointestinal microbiome in infectious complications during induction chemotherapy for acute myeloid leukemia. Cancer. 2016 07 15; 122(14):2186-96.
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  143. Altered Mucosal Microbiome Diversity and Disease Severity in Sj?gren Syndrome. Sci Rep. 2016 Apr 18; 6:23561.
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  144. Respiratory syncytial virus and rhinovirus severe bronchiolitis are associated with distinct nasopharyngeal microbiota. J Allergy Clin Immunol. 2016 06; 137(6):1909-1913.e4.
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  145. The role of gut microbiota in fetal methylmercury exposure: Insights from a pilot study. Toxicol Lett. 2016 Feb 03; 242:60-67.
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  146. Implementation of a Pan-Genomic Approach to Investigate Holobiont-Infecting Microbe Interaction: A Case Report of a Leukemic Patient with Invasive Mucormycosis. PLoS One. 2015; 10(11):e0139851.
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  147. Structure and function of the healthy pre-adolescent pediatric gut microbiome. Microbiome. 2015 Aug 26; 3:36.
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  148. Decreased microbiota diversity associated with urinary tract infection in a trial of bacterial interference. J Infect. 2015 Sep; 71(3):358-367.
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  149. Murine model of chemotherapy-induced extraintestinal pathogenic Escherichia coli translocation. Infect Immun. 2015 Aug; 83(8):3243-56.
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  150. Sequence type 1 group B Streptococcus, an emerging cause of invasive disease in adults, evolves by small genetic changes. Proc Natl Acad Sci U S A. 2015 May 19; 112(20):6431-6.
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  151. Characterization of the human gut microbiome during travelers' diarrhea. Gut Microbes. 2015; 6(2):110-9.
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  152. Initial insights into bacterial succession during human decomposition. Int J Legal Med. 2015 May; 129(3):661-71.
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  153. Characterization of the rat oral microbiome and the effects of dietary nitrate. Free Radic Biol Med. 2014 Dec; 77:249-57.
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  154. The placenta harbors a unique microbiome. Sci Transl Med. 2014 May 21; 6(237):237ra65.
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  155. Metagenomic analysis of nitrate-reducing bacteria in the oral cavity: implications for nitric oxide homeostasis. PLoS One. 2014; 9(3):e88645.
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  156. Nasopharyngeal Proteobacteria are associated with viral etiology and acute wheezing in children with severe bronchiolitis. J Allergy Clin Immunol. 2014 Apr; 133(4):1220-2.
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  157. Microbiota modulate behavioral and physiological abnormalities associated with neurodevelopmental disorders. Cell. 2013 Dec 19; 155(7):1451-63.
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  158. Development and accuracy of quantitative real-time polymerase chain reaction assays for detection and quantification of enterotoxigenic Escherichia coli (ETEC) heat labile and heat stable toxin genes in travelers' diarrhea samples. Am J Trop Med Hyg. 2014 Jan; 90(1):124-32.
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  159. The changing landscape of type 1 diabetes: recent developments and future frontiers. Curr Diab Rep. 2013 Oct; 13(5):642-50.
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  160. Changes in cystic fibrosis airway microbiota at pulmonary exacerbation. Ann Am Thorac Soc. 2013 Jun; 10(3):179-87.
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  162. The Human Microbiome Project strategy for comprehensive sampling of the human microbiome and why it matters. FASEB J. 2013 Mar; 27(3):1012-22.
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  166. A metagenomic approach to characterization of the vaginal microbiome signature in pregnancy. PLoS One. 2012; 7(6):e36466.
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  167. Decade-long bacterial community dynamics in cystic fibrosis airways. Proc Natl Acad Sci U S A. 2012 Apr 10; 109(15):5809-14.
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  171. Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome. Gastroenterology. 2011 Nov; 141(5):1782-91.
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  172. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nat Biotechnol. 2011 May; 29(5):415-20.
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  176. Genome sequence of Fusobacterium nucleatum subspecies polymorphum - a genetically tractable fusobacterium. PLoS One. 2007 Aug 01; 2(7):e659.
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Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.