Connection

CHRIS AMOS to Haplotypes

This is a "connection" page, showing publications CHRIS AMOS has written about Haplotypes.
Connection Strength

2.101
  1. Ignoring linkage disequilibrium among tightly linked markers induces false-positive evidence of linkage for affected sib pair analysis. Am J Hum Genet. 2004 Dec; 75(6):1106-12.
    View in: PubMed
    Score: 0.196
  2. Genetic Variation and Recurrent Haplotypes on Chromosome 6q23-25 Risk Locus in Familial Lung Cancer. Cancer Res. 2021 06 15; 81(12):3162-3173.
    View in: PubMed
    Score: 0.154
  3. The role of haplotype in 15q25.1 locus in lung cancer risk: results of scanning chromosome 15. Carcinogenesis. 2015 Nov; 36(11):1275-83.
    View in: PubMed
    Score: 0.104
  4. Genome-wide association tests of inversions with application to psoriasis. Hum Genet. 2014 Aug; 133(8):967-74.
    View in: PubMed
    Score: 0.094
  5. Principal components analysis of population admixture. PLoS One. 2012; 7(7):e40115.
    View in: PubMed
    Score: 0.084
  6. Investigation of inversion polymorphisms in the human genome using principal components analysis. PLoS One. 2012; 7(7):e40224.
    View in: PubMed
    Score: 0.084
  7. Novel genetic variants in the chromosome 5p15.33 region associate with lung cancer risk. Carcinogenesis. 2011 Oct; 32(10):1493-9.
    View in: PubMed
    Score: 0.078
  8. Accelerating haplotype-based genome-wide association study using perfect phylogeny and phase-known reference data. PLoS One. 2011; 6(7):e22097.
    View in: PubMed
    Score: 0.078
  9. A susceptibility locus on chromosome 6q greatly increases lung cancer risk among light and never smokers. Cancer Res. 2010 Mar 15; 70(6):2359-67.
    View in: PubMed
    Score: 0.071
  10. Common variants at CD40 and other loci confer risk of rheumatoid arthritis. Nat Genet. 2008 Oct; 40(10):1216-23.
    View in: PubMed
    Score: 0.064
  11. Genome-wide association scan of tag SNPs identifies a susceptibility locus for lung cancer at 15q25.1. Nat Genet. 2008 May; 40(5):616-22.
    View in: PubMed
    Score: 0.062
  12. Detecting haplotype effects in genomewide association studies. Genet Epidemiol. 2007 Dec; 31(8):803-12.
    View in: PubMed
    Score: 0.061
  13. HLA loci heterozygosity modulates genetic risk in idiopathic inflammatory myopathies. Ann Rheum Dis. 2025 Oct; 84(10):1696-1705.
    View in: PubMed
    Score: 0.052
  14. Identification of Novel Associations and Localization of Signals in Idiopathic Inflammatory Myopathies Using Genome-Wide Imputation. Arthritis Rheumatol. 2023 06; 75(6):1021-1027.
    View in: PubMed
    Score: 0.044
  15. Positional identification of microdeletions with genetic markers. Hum Hered. 2003; 56(1-3):107-18.
    View in: PubMed
    Score: 0.043
  16. Germline determinants of humoral immune response to HPV-16 protect against oropharyngeal cancer. Nat Commun. 2021 10 12; 12(1):5945.
    View in: PubMed
    Score: 0.040
  17. Whole Exome Sequencing of Highly Aggregated Lung Cancer Families Reveals Linked Loci for Increased Cancer Risk on Chromosomes 12q, 7p, and 4q. Cancer Epidemiol Biomarkers Prev. 2020 02; 29(2):434-442.
    View in: PubMed
    Score: 0.035
  18. Metabolome-wide association study identified the association between a circulating polyunsaturated fatty acids variant rs174548 and lung cancer. Carcinogenesis. 2017 10 26; 38(11):1147-1154.
    View in: PubMed
    Score: 0.030
  19. Identification of Functional and Expression Polymorphisms Associated With Risk for Antineutrophil Cytoplasmic Autoantibody-Associated Vasculitis. Arthritis Rheumatol. 2017 05; 69(5):1054-1066.
    View in: PubMed
    Score: 0.029
  20. Genetic variants in the integrin signaling pathway genes predict cutaneous melanoma survival. Int J Cancer. 2017 03 15; 140(6):1270-1279.
    View in: PubMed
    Score: 0.029
  21. Genome-wide association analyses identify new susceptibility loci for oral cavity and pharyngeal cancer. Nat Genet. 2016 12; 48(12):1544-1550.
    View in: PubMed
    Score: 0.028
  22. Genome-wide association study identifies HLA 8.1 ancestral haplotype alleles as major genetic risk factors for myositis phenotypes. Genes Immun. 2015 Oct; 16(7):470-80.
    View in: PubMed
    Score: 0.026
  23. 15q12 variants, sputum gene promoter hypermethylation, and lung cancer risk: a GWAS in smokers. J Natl Cancer Inst. 2015 Feb 23; 107(5).
    View in: PubMed
    Score: 0.025
  24. Genome-wide scan of 29,141 African Americans finds no evidence of directional selection since admixture. Am J Hum Genet. 2014 Oct 02; 95(4):437-44.
    View in: PubMed
    Score: 0.024
  25. The IRF5-TNPO3 association with systemic lupus erythematosus has two components that other autoimmune disorders variably share. Hum Mol Genet. 2015 Jan 15; 24(2):582-96.
    View in: PubMed
    Score: 0.024
  26. Identification of secreted phosphoprotein 1 gene as a new rheumatoid arthritis susceptibility gene. Ann Rheum Dis. 2015 Mar; 74(3):e19.
    View in: PubMed
    Score: 0.023
  27. Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. Arthritis Rheum. 2013 Sep; 65(9):2457-68.
    View in: PubMed
    Score: 0.023
  28. Variants in melanocortin 1 receptor gene contribute to risk of melanoma--a direct sequencing analysis in a Texas population. Pigment Cell Melanoma Res. 2013 May; 26(3):422-5.
    View in: PubMed
    Score: 0.022
  29. Genetic variation in SIRT1 affects susceptibility of lung squamous cell carcinomas in former uranium miners from the Colorado plateau. Carcinogenesis. 2013 May; 34(5):1044-50.
    View in: PubMed
    Score: 0.022
  30. Identification of the NF-?B activating protein-like locus as a risk locus for rheumatoid arthritis. Ann Rheum Dis. 2013 Jul; 72(7):1249-54.
    View in: PubMed
    Score: 0.022
  31. Insight in glioma susceptibility through an analysis of 6p22.3, 12p13.33-12.1, 17q22-23.2 and 18q23 SNP genotypes in familial and non-familial glioma. Hum Genet. 2012 Sep; 131(9):1507-17.
    View in: PubMed
    Score: 0.021
  32. Association of primary biliary cirrhosis with variants in the CLEC16A, SOCS1, SPIB and SIAE immunomodulatory genes. Genes Immun. 2012 Jun; 13(4):328-35.
    View in: PubMed
    Score: 0.020
  33. Genetic determinants for promoter hypermethylation in the lungs of smokers: a candidate gene-based study. Cancer Res. 2012 Feb 01; 72(3):707-15.
    View in: PubMed
    Score: 0.020
  34. Susceptibility locus for lung cancer at 15q25.1 is not associated with risk of pancreatic cancer. Pancreas. 2011 Aug; 40(6):872-5.
    View in: PubMed
    Score: 0.020
  35. The landscape of recombination in African Americans. Nature. 2011 Jul 20; 476(7359):170-5.
    View in: PubMed
    Score: 0.020
  36. Sex-specific effect of the TP53 PIN3 polymorphism on cancer risk in a cohort study of TP53 germline mutation carriers. Hum Genet. 2011 Dec; 130(6):789-94.
    View in: PubMed
    Score: 0.019
  37. A second genetic variant on chromosome 15q24-25.1 associates with lung cancer. Cancer Res. 2010 Apr 15; 70(8):3128-35.
    View in: PubMed
    Score: 0.018
  38. Haplotype and cell proliferation analyses of candidate lung cancer susceptibility genes on chromosome 15q24-25.1. Cancer Res. 2009 Oct 01; 69(19):7844-50.
    View in: PubMed
    Score: 0.017
  39. Genetic variation in the prostate stem cell antigen gene PSCA confers susceptibility to urinary bladder cancer. Nat Genet. 2009 Sep; 41(9):991-5.
    View in: PubMed
    Score: 0.017
  40. Evidence for a founder effect of the MPL-S505N mutation in eight Italian pedigrees with hereditary thrombocythemia. Haematologica. 2009 Oct; 94(10):1368-74.
    View in: PubMed
    Score: 0.017
  41. Fine mapping of chromosome 6q23-25 region in familial lung cancer families reveals RGS17 as a likely candidate gene. Clin Cancer Res. 2009 Apr 15; 15(8):2666-74.
    View in: PubMed
    Score: 0.017
  42. CTLA4/ICOS gene variants and haplotypes are associated with rheumatoid arthritis and primary biliary cirrhosis in the Canadian population. Arthritis Rheum. 2009 Apr; 60(4):931-7.
    View in: PubMed
    Score: 0.017
  43. A large-scale rheumatoid arthritis genetic study identifies association at chromosome 9q33.2. PLoS Genet. 2008 Jun 27; 4(6):e1000107.
    View in: PubMed
    Score: 0.016
  44. The inflammatory disease-associated variants in IL12B and IL23R are not associated with rheumatoid arthritis. Arthritis Rheum. 2008 Jun; 58(6):1877-81.
    View in: PubMed
    Score: 0.016
  45. Several regions in the major histocompatibility complex confer risk for anti-CCP-antibody positive rheumatoid arthritis, independent of the DRB1 locus. Mol Med. 2008 May-Jun; 14(5-6):293-300.
    View in: PubMed
    Score: 0.016
  46. Mutagen sensitivity and genetic variants in nucleotide excision repair pathway: genotype-phenotype correlation. Cancer Epidemiol Biomarkers Prev. 2007 Oct; 16(10):2065-71.
    View in: PubMed
    Score: 0.015
  47. STAT4 and the risk of rheumatoid arthritis and systemic lupus erythematosus. N Engl J Med. 2007 Sep 06; 357(10):977-86.
    View in: PubMed
    Score: 0.015
  48. Aurora-A and p16 polymorphisms contribute to an earlier age at diagnosis of pancreatic cancer in Caucasians. Clin Cancer Res. 2007 May 15; 13(10):3100-4.
    View in: PubMed
    Score: 0.015
  49. Refining the complex rheumatoid arthritis phenotype based on specificity of the HLA-DRB1 shared epitope for antibodies to citrullinated proteins. Arthritis Rheum. 2005 Nov; 52(11):3433-8.
    View in: PubMed
    Score: 0.013
  50. PTPN22 genetic variation: evidence for multiple variants associated with rheumatoid arthritis. Am J Hum Genet. 2005 Oct; 77(4):567-81.
    View in: PubMed
    Score: 0.013
  51. Functional variants of OCTN cation transporter genes are associated with Crohn disease. Nat Genet. 2004 May; 36(5):471-5.
    View in: PubMed
    Score: 0.012
  52. The worldwide distribution of the VHL 598C>T mutation indicates a single founding event. Blood. 2004 Mar 01; 103(5):1937-40.
    View in: PubMed
    Score: 0.011
  53. Dissecting the genetic complexity of the association between human leukocyte antigens and rheumatoid arthritis. Am J Hum Genet. 2002 Sep; 71(3):585-94.
    View in: PubMed
    Score: 0.011
  54. p53 Genotypes and Haplotypes Associated With Lung Cancer Susceptibility and Ethnicity. J Natl Cancer Inst. 2002 May 01; 94(9):681-90.
    View in: PubMed
    Score: 0.010
  55. Common deletion of SMAD4 in juvenile polyposis is a mutational hotspot. Am J Hum Genet. 2002 May; 70(5):1357-62.
    View in: PubMed
    Score: 0.010
  56. Tumour necrosis factor 5' promoter single nucleotide polymorphisms influence susceptibility to rheumatoid arthritis (RA) in immunogenetically defined multiplex RA families. Genes Immun. 2001 Apr; 2(2):82-7.
    View in: PubMed
    Score: 0.010
  57. Adaptations of linkage and association methods for the study of asthma, a complex trait. Genet Epidemiol. 2001; 21 Suppl 1:S89-96.
    View in: PubMed
    Score: 0.009
  58. Genetic variability in the tumor necrosis factor-lymphotoxin region influences susceptibility to rheumatoid arthritis. Am J Hum Genet. 1996 Sep; 59(3):676-83.
    View in: PubMed
    Score: 0.007
  59. Linkage between the APOB gene and serum ApoB levels in a large pedigree from the Bogalusa Heart Study. Genet Epidemiol. 1994; 11(1):29-40.
    View in: PubMed
    Score: 0.006
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.