CHRIS AMOS to Alleles
This is a "connection" page, showing publications CHRIS AMOS has written about Alleles.
Connection Strength
2.541
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False positive findings during genome-wide association studies with imputation: influence of allele frequency and imputation accuracy. Hum Mol Genet. 2021 12 17; 31(1):146-155.
Score: 0.130
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Genome-Wide Analysis of Head and Neck Squamous Cell Carcinomas Reveals HPV, TP53, Smoking and Alcohol-Related Allele-Based Acquired Uniparental Disomy Genomic Alterations. Neoplasia. 2019 02; 21(2):197-205.
Score: 0.106
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META-GSA: Combining Findings from Gene-Set Analyses across Several Genome-Wide Association Studies. PLoS One. 2015; 10(10):e0140179.
Score: 0.085
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Genome-wide association study identifies HLA 8.1 ancestral haplotype alleles as major genetic risk factors for myositis phenotypes. Genes Immun. 2015 Oct; 16(7):470-80.
Score: 0.084
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Allelic Spectra of Risk SNPs Are Different for Environment/Lifestyle Dependent versus Independent Diseases. PLoS Genet. 2015 Jul; 11(7):e1005371.
Score: 0.083
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Analysis of HLA-D locus alleles in alopecia areata patients and families. J Invest Dermatol. 1995 May; 104(5 Suppl):5S-6S.
Score: 0.082
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A unified framework integrating parent-of-origin effects for association study. PLoS One. 2013; 8(8):e72208.
Score: 0.073
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Derived SNP alleles are used more frequently than ancestral alleles as risk-associated variants in common human diseases. J Bioinform Comput Biol. 2012 Apr; 10(2):1241008.
Score: 0.066
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No association between Parkinson disease alleles and the risk of melanoma. Cancer Epidemiol Biomarkers Prev. 2012 Jan; 21(1):243-5.
Score: 0.065
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Genome-wide meta-analyses identify three loci associated with primary biliary cirrhosis. Nat Genet. 2010 Aug; 42(8):658-60.
Score: 0.059
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Power analysis for case-control association studies of samples with known family histories. Hum Genet. 2010 Jun; 127(6):699-704.
Score: 0.058
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Relative effects of mutability and selection on single nucleotide polymorphisms in transcribed regions of the human genome. BMC Genomics. 2008 Jun 17; 9:292.
Score: 0.051
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Successful design and conduct of genome-wide association studies. Hum Mol Genet. 2007 Oct 15; 16 Spec No. 2:R220-5.
Score: 0.048
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EGFR-T790M is a rare lung cancer susceptibility allele with enhanced kinase activity. Cancer Res. 2007 May 15; 67(10):4665-70.
Score: 0.047
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Stochastic search gene suggestion: a Bayesian hierarchical model for gene mapping. Biometrics. 2006 Jun; 62(2):495-503.
Score: 0.044
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HLA loci heterozygosity modulates genetic risk in idiopathic inflammatory myopathies. Ann Rheum Dis. 2025 Oct; 84(10):1696-1705.
Score: 0.042
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Linkage analysis of affected sib pairs allowing for parent-of-origin effects. Ann Hum Genet. 2005 Jan; 69(Pt 1):113-26.
Score: 0.040
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High-throughput characterization of functional variants highlights heterogeneity and polygenicity underlying lung cancer susceptibility. Am J Hum Genet. 2024 07 11; 111(7):1405-1419.
Score: 0.039
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Statistical properties of affected sib-pair linkage tests. Hum Hered. 2003; 55(4):153-62.
Score: 0.035
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Testing for genetic linkage in families by a variance-components approach in the presence of genomic imprinting. Am J Hum Genet. 2002 Mar; 70(3):751-7.
Score: 0.033
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Whole-chromosome arm acquired uniparental disomy in cancer development is a consequence of isochromosome formation. Neoplasia. 2022 03; 25:9-17.
Score: 0.033
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Genetic variants of SDCCAG8 and MAGI2 in mitosis-related pathway genes are independent predictors of cutaneous melanoma-specific survival. Cancer Sci. 2021 Oct; 112(10):4355-4364.
Score: 0.032
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Genome-wide association meta-analysis identifies pleiotropic risk loci for aerodigestive squamous cell cancers. PLoS Genet. 2021 03; 17(3):e1009254.
Score: 0.031
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Age-associated risk of cancer among individuals with N-acetyltransferase 2 (NAT2) mutations and mutations in DNA mismatch repair genes. Cancer Res. 2001 Feb 15; 61(4):1269-71.
Score: 0.031
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Modeling age x major gene interaction by a variance component approach. Genet Epidemiol. 2001; 21 Suppl 1:S849-53.
Score: 0.030
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Protein-altering germline mutations implicate novel genes related to lung cancer development. Nat Commun. 2020 05 11; 11(1):2220.
Score: 0.029
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Joint modeling of eQTLs and parent-of-origin effects using an orthogonal framework with RNA-seq data. Hum Genet. 2020 Aug; 139(8):1107-1117.
Score: 0.029
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An accurate and powerful method for copy number variation detection. Bioinformatics. 2019 09 01; 35(17):2891-2898.
Score: 0.028
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Comparison of linkage-disequilibrium methods for localization of genes influencing quantitative traits in humans. Am J Hum Genet. 1999 Apr; 64(4):1194-205.
Score: 0.027
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DNA pooling in mutation detection with reference to sequence analysis. Am J Hum Genet. 2000 May; 66(5):1689-92.
Score: 0.027
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Genome scans for genetic predisposition to alcoholism by use of transmission disequilibrium test analyses. Genet Epidemiol. 1999; 17 Suppl 1:S277-81.
Score: 0.026
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A genome-wide search for susceptibility genes linked to alcohol dependence. Genet Epidemiol. 1999; 17 Suppl 1:S295-300.
Score: 0.026
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Sex-specific glioma genome-wide association study identifies new risk locus at 3p21.31 in females, and finds sex-differences in risk at 8q24.21. Sci Rep. 2018 05 09; 8(1):7352.
Score: 0.025
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Genetic variants in RORA and DNMT1 associated with cutaneous melanoma survival. Int J Cancer. 2018 06 01; 142(11):2303-2312.
Score: 0.025
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Genome-wide association study across European and African American ancestries identifies a SNP in DNMT3B contributing to nicotine dependence. Mol Psychiatry. 2018 09; 23(9):1911-1919.
Score: 0.024
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Common TDP1 Polymorphisms in Relation to Survival among Small Cell Lung Cancer Patients: A Multicenter Study from the International Lung Cancer Consortium. Clin Cancer Res. 2017 Dec 15; 23(24):7550-7557.
Score: 0.024
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Genetic Variants in WNT2B and BTRC Predict Melanoma Survival. J Invest Dermatol. 2017 08; 137(8):1749-1756.
Score: 0.024
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Functional characterization of a multi-cancer risk locus on chr5p15.33 reveals regulation of TERT by ZNF148. Nat Commun. 2017 05 02; 8:15034.
Score: 0.024
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Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer. Nat Genet. 2017 May; 49(5):680-691.
Score: 0.023
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Genome-wide association study of glioma subtypes identifies specific differences in genetic susceptibility to glioblastoma and non-glioblastoma tumors. Nat Genet. 2017 May; 49(5):789-794.
Score: 0.023
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Telomere structure and maintenance gene variants and risk of five cancer types. Int J Cancer. 2016 Dec 15; 139(12):2655-2670.
Score: 0.023
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Clinical Genotyping of Non-Small Cell Lung Cancers Using Targeted Next-Generation Sequencing: Utility of Identifying Rare and Co-mutations in Oncogenic Driver Genes. Neoplasia. 2016 09; 18(9):577-83.
Score: 0.022
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Genetic Risk Can Be Decreased: Quitting Smoking Decreases and Delays Lung Cancer for Smokers With High and Low CHRNA5 Risk Genotypes - A Meta-Analysis. EBioMedicine. 2016 Sep; 11:219-226.
Score: 0.022
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Dense genotyping of immune-related loci in idiopathic inflammatory myopathies confirms HLA alleles as the strongest genetic risk factor and suggests different genetic background for major clinical subgroups. Ann Rheum Dis. 2016 Aug; 75(8):1558-66.
Score: 0.021
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Genetic variants in Hippo pathway genes YAP1, TEAD1 and TEAD4 are associated with melanoma-specific survival. Int J Cancer. 2015 Aug 01; 137(3):638-45.
Score: 0.020
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Genome-wide meta-analysis in alopecia areata resolves HLA associations and reveals two new susceptibility loci. Nat Commun. 2015 Jan 22; 6:5966.
Score: 0.020
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Trans-ethnic genome-wide association study of colorectal cancer identifies a new susceptibility locus in VTI1A. Nat Commun. 2014 Aug 08; 5:4613.
Score: 0.019
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Imputation and subset-based association analysis across different cancer types identifies multiple independent risk loci in the TERT-CLPTM1L region on chromosome 5p15.33. Hum Mol Genet. 2014 Dec 15; 23(24):6616-33.
Score: 0.019
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Identification of secreted phosphoprotein 1 gene as a new rheumatoid arthritis susceptibility gene. Ann Rheum Dis. 2015 Mar; 74(3):e19.
Score: 0.019
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Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. Arthritis Rheum. 2013 Sep; 65(9):2457-68.
Score: 0.018
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Fine-mapping of genome-wide association study-identified risk loci for colorectal cancer in African Americans. Hum Mol Genet. 2013 Dec 15; 22(24):5048-55.
Score: 0.018
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Hierarchical modeling identifies novel lung cancer susceptibility variants in inflammation pathways among 10,140 cases and 11,012 controls. Hum Genet. 2013 05; 132(5):579-89.
Score: 0.018
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Genetic variation in SIRT1 affects susceptibility of lung squamous cell carcinomas in former uranium miners from the Colorado plateau. Carcinogenesis. 2013 May; 34(5):1044-50.
Score: 0.018
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Identification of the NF-?B activating protein-like locus as a risk locus for rheumatoid arthritis. Ann Rheum Dis. 2013 Jul; 72(7):1249-54.
Score: 0.017
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Immunochip analyses identify a novel risk locus for primary biliary cirrhosis at 13q14, multiple independent associations at four established risk loci and epistasis between 1p31 and 7q32 risk variants. Hum Mol Genet. 2012 Dec 01; 21(23):5209-21.
Score: 0.017
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Association of primary biliary cirrhosis with variants in the CLEC16A, SOCS1, SPIB and SIAE immunomodulatory genes. Genes Immun. 2012 Jun; 13(4):328-35.
Score: 0.016
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The landscape of recombination in African Americans. Nature. 2011 Jul 20; 476(7359):170-5.
Score: 0.016
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Identification of novel genetic markers associated with clinical phenotypes of systemic sclerosis through a genome-wide association strategy. PLoS Genet. 2011 Jul; 7(7):e1002178.
Score: 0.016
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Genome-wide association study identifies novel alleles associated with risk of cutaneous basal cell carcinoma and squamous cell carcinoma. Hum Mol Genet. 2011 Sep 15; 20(18):3718-24.
Score: 0.016
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Sex-specific effect of the TP53 PIN3 polymorphism on cancer risk in a cohort study of TP53 germline mutation carriers. Hum Genet. 2011 Dec; 130(6):789-94.
Score: 0.016
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The probabilistic determination of identity-by-descent sharing for pairs of relatives from pedigrees. Am J Hum Genet. 1990 Nov; 47(5):842-53.
Score: 0.015
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Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with Beh?et's disease. Nat Genet. 2010 Aug; 42(8):698-702.
Score: 0.015
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Genome-wide association study in alopecia areata implicates both innate and adaptive immunity. Nature. 2010 Jul 01; 466(7302):113-7.
Score: 0.015
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A second genetic variant on chromosome 15q24-25.1 associates with lung cancer. Cancer Res. 2010 Apr 15; 70(8):3128-35.
Score: 0.014
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Estimating the power of linkage analysis in hereditary breast cancer. Am J Hum Genet. 1990 Feb; 46(2):266-72.
Score: 0.014
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Genetic variants of p21 and p27 and pancreatic cancer risk in non-Hispanic Whites: a case-control study. Pancreas. 2010 Jan; 39(1):1-4.
Score: 0.014
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Polymorphism in the 5'-flanking region of the insulin gene and its potential relation to cardiovascular disease risk: observations in a biracial community. The Bogalusa Heart Study. Atherosclerosis. 1989 Sep; 79(1):51-7.
Score: 0.014
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Genetic variation in the prostate stem cell antigen gene PSCA confers susceptibility to urinary bladder cancer. Nat Genet. 2009 Sep; 41(9):991-5.
Score: 0.014
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CTLA4/ICOS gene variants and haplotypes are associated with rheumatoid arthritis and primary biliary cirrhosis in the Canadian population. Arthritis Rheum. 2009 Apr; 60(4):931-7.
Score: 0.013
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Power of the sib-pair and lod-score methods for linkage analysis of quantitative traits. Prog Clin Biol Res. 1989; 329:201-6.
Score: 0.013
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Information for detecting linkage when sampling affected individuals. Prog Clin Biol Res. 1989; 329:207-12.
Score: 0.013
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A more powerful robust sib-pair test of linkage for quantitative traits. Genet Epidemiol. 1989; 6(3):435-49.
Score: 0.013
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A large-scale rheumatoid arthritis genetic study identifies association at chromosome 9q33.2. PLoS Genet. 2008 Jun 27; 4(6):e1000107.
Score: 0.013
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Several regions in the major histocompatibility complex confer risk for anti-CCP-antibody positive rheumatoid arthritis, independent of the DRB1 locus. Mol Med. 2008 May-Jun; 14(5-6):293-300.
Score: 0.013
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Interaction of NK inhibitory receptor genes with HLA-C and MHC class II alleles in Hepatitis C virus infection outcome. Mol Immunol. 2008 May; 45(9):2429-36.
Score: 0.012
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Mutagen sensitivity and genetic variants in nucleotide excision repair pathway: genotype-phenotype correlation. Cancer Epidemiol Biomarkers Prev. 2007 Oct; 16(10):2065-71.
Score: 0.012
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Influence of methylenetetrahydrofolate reductase gene polymorphisms C677T and A1298C on age-associated risk for colorectal cancer in a caucasian lynch syndrome population. Cancer Epidemiol Biomarkers Prev. 2007 Sep; 16(9):1753-9.
Score: 0.012
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Association between Aurora-A kinase polymorphisms and age of onset of hereditary nonpolyposis colorectal cancer in a Caucasian population. Mol Carcinog. 2007 Apr; 46(4):249-56.
Score: 0.012
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Forward-time simulations of human populations with complex diseases. PLoS Genet. 2007 Mar 23; 3(3):e47.
Score: 0.012
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Identification of a novel tumor suppressor gene p34 on human chromosome 6q25.1. Cancer Res. 2007 Jan 01; 67(1):93-9.
Score: 0.012
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An evolutionary perspective on single-nucleotide polymorphism screening in molecular cancer epidemiology. Cancer Res. 2004 Mar 15; 64(6):2251-7.
Score: 0.009
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Effect of winsorization on power and type 1 error of variance components and related methods of QTL detection. Behav Genet. 2004 Mar; 34(2):153-9.
Score: 0.009
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CARD15 and HLA DRB1 alleles influence susceptibility and disease localization in Crohn's disease. Am J Gastroenterol. 2004 Feb; 99(2):306-15.
Score: 0.009
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The worldwide distribution of the VHL 598C>T mutation indicates a single founding event. Blood. 2004 Mar 01; 103(5):1937-40.
Score: 0.009
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Dissecting the genetic complexity of the association between human leukocyte antigens and rheumatoid arthritis. Am J Hum Genet. 2002 Sep; 71(3):585-94.
Score: 0.008
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A genomewide screen in multiplex rheumatoid arthritis families suggests genetic overlap with other autoimmune diseases. Am J Hum Genet. 2001 Apr; 68(4):927-36.
Score: 0.008
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Genetic analysis of multiplex rheumatoid arthritis families. Genes Immun. 1999 Sep; 1(1):28-36.
Score: 0.007
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Testing for linkage under robust genetic models. Hum Hered. 1999 Jun; 49(3):146-53.
Score: 0.007
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Exclusion of a p53 germline mutation in a classic Li-Fraumeni syndrome family. Hum Genet. 1998 Jun; 102(6):681-6.
Score: 0.006
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Case-control study of the D2 dopamine receptor gene and smoking status in lung cancer patients. J Natl Cancer Inst. 1998 Mar 04; 90(5):358-63.
Score: 0.006
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Autosomal dominant cerebellar ataxia (SCA6) associated with small polyglutamine expansions in the alpha 1A-voltage-dependent calcium channel. Nat Genet. 1997 Jan; 15(1):62-9.
Score: 0.006
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Higher lung cancer risk for younger African-Americans with the Pro/Pro p53 genotype. Carcinogenesis. 1995 Sep; 16(9):2205-8.
Score: 0.005
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Investigating the genetic basis for ankylosing spondylitis. Linkage studies with the major histocompatibility complex region. Arthritis Rheum. 1994 Aug; 37(8):1212-20.
Score: 0.005