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DAVID THOMAS ALFONSO FUENTES

TitleAssistant Professor
InstitutionMD Anderson
DepartmentImaging Physics
Address1881 East Road
Houston TX 77054-3005
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Wahid KA, Kaffey ZY, Farris DP, Humbert-Vidan L, Moreno AC, Rasmussen M, Ren J, Naser MA, Netherton TJ, Korreman S, Balakrishnan G, Fuller CD, Fuentes D, Dohopolski MJ. Artificial intelligence uncertainty quantification in radiotherapy applications - A scoping review. Radiother Oncol. 2024 Sep 17; 201:110542. PMID: 39299574.
      Citations:    Fields:    
    2. MD Anderson Head and Neck Cancer Symptom Working Group, Kamel S, Humbert-Vidan L, Kaffey Z, Abusaif A, Fuentes DTA, Wahid K, Dede C, Naser MA, He R, Moawad AW, Elsayes KM, Chen MM, Otun AO, Rigert J, Chambers M, Hope A, Watson E, Brock KK, Hutcheson K, van Dijk L, Moreno AC, Lai SY, Fuller CD, Mohamed ASR. Computed tomography radiomics-based cross-sectional detection of mandibular osteoradionecrosis in head and neck cancer survivors. medRxiv. 2024 Sep 12. PMID: 39314948; PMCID: PMC11419222.
      Citations:    
    3. Amare R, Stolley D, Parrish S, Jacobsen M, Layman R, Santos C, Riviere B, Fowlkes N, Fuentes D, Cressman E. 1D Thermoembolization Model Using CT Imaging Data for Porcine Liver. ArXiv. 2024 Sep 10. PMID: 39314502; PMCID: PMC11419193.
      Citations:    
    4. Patel N, Celaya A, Eltaher M, Glenn R, Savannah KB, Brock KK, Sanchez JI, Calderone TL, Cleere D, Elsaiey A, Cagley M, Gupta N, Victor D, Beretta L, Koay EJ, Netherton TJ, Fuentes DT. Training robust T1-weighted magnetic resonance imaging liver segmentation models using ensembles of datasets with different contrast protocols and liver disease etiologies. Sci Rep. 2024 09 09; 14(1):20988. PMID: 39251664; PMCID: PMC11385384.
      Citations:    Fields:    Translation:Humans
    5. Marquez B, Wooten ZT, Salazar RM, Peterson CB, Fuentes DT, Whitaker TJ, Jhingran A, Pollard-Larkin J, Prajapati S, Beadle B, Cardenas CE, Netherton TJ, Court LE. Analyzing the Relationship between Dose and Geometric Agreement Metrics for Auto-Contouring in Head and Neck Normal Tissues. Diagnostics (Basel). 2024 Jul 29; 14(15). PMID: 39125508; PMCID: PMC11311423.
      Citations:    
    6. Wahid KA, Sahin O, Kundu S, Lin D, Alanis A, Tehami S, Kamel S, Duke S, Sherer MV, Rasmussen M, Korreman S, Fuentes D, Cislo M, Nelms BE, Christodouleas JP, Murphy JD, Mohamed ASR, He R, Naser MA, Gillespie EF, Fuller CD. Associations Between Radiation Oncologist Demographic Factors and Segmentation Similarity Benchmarks: Insights From a Crowd-Sourced Challenge Using Bayesian Estimation. JCO Clin Cancer Inform. 2024 Jun; 8:e2300174. PMID: 38870441; PMCID: PMC11214868.
      Citations:    Fields:    Translation:Humans
    7. Wahid KA, Kaffey ZY, Farris DP, Humbert-Vidan L, Moreno AC, Rasmussen M, Ren J, Naser MA, Netherton TJ, Korreman S, Balakrishnan G, Fuller CD, Fuentes D, Dohopolski MJ. Artificial Intelligence Uncertainty Quantification in Radiotherapy Applications - A Scoping Review. medRxiv. 2024 May 13. PMID: 38798581; PMCID: PMC11118597.
      Citations:    
    8. Patel N, Eltaher M, Glenn R, Savannah KB, Brock K, Sanchez J, Calderone T, Cleere D, Elsaiey A, Cagley M, Gupta N, Victor D, Beretta L, Celaya A, Koay E, Netherton T, Fuentes D. Training Robust T1-Weighted Magnetic Resonance Imaging Liver Segmentation Models Using Ensembles of Datasets with Different Contrast Protocols and Liver Disease Etiologies. Res Sq. 2024 Apr 30. PMID: 38746406; PMCID: PMC11092841.
      Citations:    
    9. Wahid KA, Cardenas CE, Marquez B, Netherton TJ, Kann BH, Court LE, He R, Naser MA, Moreno AC, Fuller CD, Fuentes D. Evolving Horizons in Radiation Therapy Auto-Contouring: Distilling Insights, Embracing Data-Centric Frameworks, and Moving Beyond Geometric Quantification. Adv Radiat Oncol. 2024 Jul; 9(7):101521. PMID: 38799110; PMCID: PMC11111585.
      Citations: 2     
    10. Muthusivarajan R, Celaya A, Yung JP, Long JP, Viswanath SE, Marcus DS, Chung C, Fuentes D. Evaluating the relationship between magnetic resonance image quality metrics and deep learning-based segmentation accuracy of brain tumors. Med Phys. 2024 Jul; 51(7):4898-4906. PMID: 38640464; PMCID: PMC11233231.
      Citations:    Fields:    Translation:Humans
    11. Nikzad N, Fuentes DT, Roach M, Chowdhury T, Cagley M, Badawy M, Elkhesen A, Hassan M, Elsayes KM, Beretta L, Koay EJ, Jalal PK. Enhancement Pattern Mapping for Early Detection of Hepatocellular Carcinoma in Patients with Cirrhosis. J Hepatocell Carcinoma. 2024; 11:595-606. PMID: 38525156; PMCID: PMC10961013.
      Citations:    
    12. Huang K, Chung C, Ludmir EB, Zhang L, Owens CA, Vega JG, Duryea J, Zhao Y, Chen X, Fuentes D, Cardenas CE, Briere TM, Beddar S, Court LE, Das P. Automatic end-to-end VMAT treatment planning for rectal cancers. J Appl Clin Med Phys. 2024 Apr; 25(4):e14259. PMID: 38317597; PMCID: PMC11005975.
      Citations:    Fields:    Translation:Humans
    13. Wahid KA, Fuentes D. Weak Supervision, Strong Results: Achieving High Performance in Intracranial Hemorrhage Detection with Fewer Annotation Labels. Radiol Artif Intell. 2024 Jan; 6(1):e230598. PMID: 38294326; PMCID: PMC10831509.
      Citations:    Fields:    
    14. Wahid KA, Sahlsten J, Jaskari J, Dohopolski MJ, Kaski K, He R, Glerean E, Kann BH, M?kitie A, Fuller CD, Naser MA, Fuentes D. Harnessing uncertainty in radiotherapy auto-segmentation quality assurance. Phys Imaging Radiat Oncol. 2024 Jan; 29:100526. PMID: 38179210; PMCID: PMC10765294.
      Citations: 3     
    15. Jha PK, Walker C, Mitchell D, Oden JT, Schellingerhout D, Bankson JA, Fuentes DT. Mutual-information based optimal experimental design for hyperpolarized [Formula: see text]C-pyruvate MRI. Sci Rep. 2023 Oct 23; 13(1):18047. PMID: 37872226; PMCID: PMC10593962.
      Citations:    Fields:    
    16. Wahid KA, Cardenas CE, Marquez B, Netherton TJ, Kann BH, Court LE, He R, Naser MA, Moreno AC, Fuller CD, Fuentes D. Evolving Horizons in Radiotherapy Auto-Contouring: Distilling Insights, Embracing Data-Centric Frameworks, and Moving Beyond Geometric Quantification. ArXiv. 2023 Oct 16. PMID: 37904737; PMCID: PMC10614971.
      Citations:    
    17. Patel RJS, Harlan CJ, Fuentes DT, Bankson JA. A Simulation of the Effects of Diffusion on Hyperpolarized [1-13C]-Pyruvate Signal Evolution. IEEE Trans Biomed Eng. 2023 10; 70(10):2905-2913. PMID: 37097803; PMCID: PMC10538435.
      Citations:    Fields:    
    18. Hernandez S, Burger H, Nguyen C, Paulino AC, Lucas JT, Faught AM, Duryea J, Netherton T, Rhee DJ, Cardenas C, Howell R, Fuentes D, Pollard-Larkin J, Court L, Parkes J. Validation of an automated contouring and treatment planning tool for pediatric craniospinal radiation therapy. Front Oncol. 2023; 13:1221792. PMID: 37810961; PMCID: PMC10556471.
      Citations:    
    19. Gronberg MP, Jhingran A, Netherton TJ, Gay SS, Cardenas CE, Chung C, Fuentes D, Fuller CD, Howell RM, Khan M, Lim TY, Marquez B, Olanrewaju AM, Peterson CB, Vazquez I, Whitaker TJ, Wooten Z, Yang M, Court LE. Deep learning-based dose prediction to improve the plan quality of volumetric modulated arc therapy for gynecologic cancers. Med Phys. 2023 Nov; 50(11):6639-6648. PMID: 37706560; PMCID: PMC10947338.
      Citations: 2     Fields:    Translation:Humans
    20. Wahid KA, Sahin O, Kundu S, Lin D, Alanis A, Tehami S, Kamel S, Duke S, Sherer MV, Rasmussen M, Korreman S, Fuentes D, Cislo M, Nelms BE, Christodouleas JP, Murphy JD, Mohamed ASR, He R, Naser MA, Gillespie EF, Fuller CD. Determining The Role Of Radiation Oncologist Demographic Factors On Segmentation Quality: Insights From A Crowd-Sourced Challenge Using Bayesian Estimation. medRxiv. 2023 Sep 05. PMID: 37693394; PMCID: PMC10491357.
      Citations:    
    21. Thompson EA, Jacobsen MC, Fuentes DT, Layman RR, Cressman ENK. Quantitative dual-energy computed tomography with cesium as a novel contrast agent for localization of thermochemical ablation in phantoms and ex vivo models. Med Phys. 2023 Dec; 50(12):7879-7890. PMID: 37409792; PMCID: PMC10770302.
      Citations:    Fields:    Translation:Humans
    22. Celaya A, Actor JA, Muthusivarajan R, Gates E, Chung C, Schellingerhout D, Riviere B, Fuentes D. PocketNet: A Smaller Neural Network for Medical Image Analysis. IEEE Trans Med Imaging. 2023 04; 42(4):1172-1184. PMID: 36427285; PMCID: PMC10882585.
      Citations: 1     Fields:    
    23. Hernandez S, Nguyen C, Gay S, Duryea J, Howell R, Fuentes D, Parkes J, Burger H, Cardenas C, Paulino AC, Pollard-Larkin J, Court L. Resection cavity auto-contouring for patients with pediatric medulloblastoma using only CT information. J Appl Clin Med Phys. 2023 Jul; 24(7):e13956. PMID: 36917640; PMCID: PMC10338760.
      Citations: 1     Fields:    Translation:Humans
    24. Gronberg MP, Beadle BM, Garden AS, Skinner H, Gay S, Netherton T, Cao W, Cardenas CE, Chung C, Fuentes DT, Fuller CD, Howell RM, Jhingran A, Lim TY, Marquez B, Mumme R, Olanrewaju AM, Peterson CB, Vazquez I, Whitaker TJ, Wooten Z, Yang M, Court LE. Deep Learning-Based Dose Prediction for Automated, Individualized Quality Assurance of Head and Neck Radiation Therapy Plans. Pract Radiat Oncol. 2023 May-Jun; 13(3):e282-e291. PMID: 36697347; PMCID: PMC11232032.
      Citations: 4     Fields:    Translation:Humans
    25. Moawad AW, Morshid A, Khalaf AM, Elmohr MM, Hazle JD, Fuentes D, Badawy M, Kaseb AO, Hassan M, Mahvash A, Szklaruk J, Qayyum A, Abusaif A, Bennett WC, Nolan TS, Camp B, Elsayes KM. Multimodality annotated hepatocellular carcinoma data set including pre-?and post-TACE with imaging segmentation. Sci Data. 2023 01 18; 10(1):33. PMID: 36653372; PMCID: PMC9849450.
      Citations: 1     Fields:    Translation:Humans
    26. Hernandez S, Nguyen C, Parkes J, Burger H, Rhee DJ, Netherton T, Mumme R, Vega JG, Duryea J, Leone A, Paulino AC, Cardenas C, Howell R, Fuentes D, Pollard-Larkin J, Court L. Automating the treatment planning process for 3D-conformal pediatric craniospinal irradiation therapy. Pediatr Blood Cancer. 2023 03; 70(3):e30164. PMID: 36591994.
      Citations: 2     Fields:    Translation:Humans
    27. Gates EDH, Suki D, Celaya A, Weinberg JS, Prabhu SS, Sawaya R, Huse JT, Long JP, Fuentes D, Schellingerhout D. Cellular Density in Adult Glioma, Estimated with MR Imaging Data and a Machine Learning Algorithm, Has Prognostic Power Approaching World Health Organization Histologic Grading in a Cohort of 1181 Patients. AJNR Am J Neuroradiol. 2022 10; 43(10):1411-1417. PMID: 36109124; PMCID: PMC9575543.
      Citations:    
    28. Huang K, Das P, Olanrewaju AM, Cardenas C, Fuentes D, Zhang L, Hancock D, Simonds H, Rhee DJ, Beddar S, Briere TM, Court L. Automation of radiation treatment planning for rectal cancer. J Appl Clin Med Phys. 2022 Sep; 23(9):e13712. PMID: 35808871; PMCID: PMC9512348.
      Citations:    Fields:    
    29. Liu X, Elbanan MG, Haider MA, Smith AD, Sabottke CF, Spieler BM, Turkbey B, Fuentes D, Moawad A, Kamel S, Horvat N, Elsayes KM, Luna A. Radiomics in Abdominopelvic Solid-Organ Oncologic Imaging: Current Status. AJR Am J Roentgenol. 2022 12; 219(6):985-995. PMID: 35766531; PMCID: PMC10616929.
      Citations:    Fields:    
    30. Gates EDH, Celaya A, Suki D, Schellingerhout D, Fuentes D. An efficient magnetic resonance image data quality screening dashboard. J Appl Clin Med Phys. 2022 Apr; 23(4):e13557. PMID: 35148034; PMCID: PMC8992954.
      Citations: 1     Fields:    Translation:Humans
    31. Moawad AW, Fuentes DT, ElBanan MG, Shalaby AS, Guccione J, Kamel S, Jensen CT, Elsayes KM. Artificial Intelligence in Diagnostic Radiology: Where Do We Stand, Challenges, and Opportunities. J Comput Assist Tomogr. 2022 Jan-Feb 01; 46(1):78-90. PMID: 35027520.
      Citations: 1     Fields:    Translation:Humans
    32. Papadopoulos C, Kolokithas-Ntoukas A, Moreno R, Fuentes D, Loudos G, Loukopoulos VC, Kagadis GC. Using kinetic Monte Carlo simulations to design efficient magnetic nanoparticles for clinical hyperthermia. Med Phys. 2022 Jan; 49(1):547-567. PMID: 34724215.
      Citations:    Fields:    Translation:Humans
    33. Moawad AW, Ahmed A, Fuentes DT, Hazle JD, Habra MA, Elsayes KM. Machine learning-based texture analysis for differentiation of radiologically indeterminate small adrenal tumors on adrenal protocol CT scans. Abdom Radiol (NY). 2021 10; 46(10):4853-4863. PMID: 34085089.
      Citations: 1     Fields:    Translation:Humans
    34. Liu TW, Gammon ST, Yang P, Fuentes D, Piwnica-Worms D. Myeloid cell-derived HOCl is a paracrine effector that trans-inhibits IKK/NF-?B in melanoma cells and limits early tumor progression. Sci Signal. 2021 04 06; 14(677). PMID: 33824181.
      Citations: 2     Fields:    Translation:AnimalsCells
    35. Liu TW, Gammon ST, Fuentes D, Piwnica-Worms D. Multi-Modal Multi-Spectral Intravital Macroscopic Imaging of Signaling Dynamics in Real Time during Tumor-Immune Interactions. Cells. 2021 02 25; 10(3). PMID: 33668735; PMCID: PMC7996138.
      Citations: 3     Fields:    Translation:AnimalsCells
    36. Butner JD, Fuentes D, Ozpolat B, Calin GA, Zhou X, Lowengrub J, Cristini V, Wang Z. Corrections to "A multiscale Agent-Based Model of Ductal Carcinoma in Situ". IEEE Trans Biomed Eng. 2021 02; 68(2):736. PMID: 33476261; PMCID: PMC8446858.
      Citations:    Fields:    
    37. Fuentes D, Thompson E, Jacobsen M, Crouch AC, Layman RR, Riviere B, Cressman E. Imaging-based characterization of convective tissue properties. Int J Hyperthermia. 2020 12; 37(3):155-163. PMID: 33426993; PMCID: PMC7983068.
      Citations:    
    38. Gates EDH, Weinberg JS, Prabhu SS, Lin JS, Hamilton J, Hazle JD, Fuller GN, Baladandayuthapani V, Fuentes DT, Schellingerhout D. Estimating Local Cellular Density in Glioma Using MR Imaging Data. AJNR Am J Neuroradiol. 2021 01; 42(1):102-108. PMID: 33243897; PMCID: PMC7814791.
      Citations: 1     Fields:    Translation:Humans
    39. Mitchell DP, Hwang KP, Bankson JA, Jason Stafford R, Banerjee S, Takei N, Fuentes D. An information theory model for optimizing quantitative magnetic resonance imaging acquisitions. Phys Med Biol. 2020 11 12; 65(22):225008. PMID: 32947269.
      Citations:    Fields:    Translation:Humans
    40. Muthusivarajan R, Allen WJ, Pehere AD, Sokolov KV, Fuentes D. Role of alkylated residues in the tetrapeptide self-assembly-A molecular dynamics study. J Comput Chem. 2020 12 05; 41(31):2634-2640. PMID: 32930440; PMCID: PMC7983104.
      Citations: 1     Fields:    Translation:Cells
    41. Bastos DCA, Fuentes DT, Traylor J, Weinberg J, Kumar VA, Stafford J, Li J, Rao G, Prabhu SS. The use of laser interstitial thermal therapy in the treatment of brain metastases: a literature review. Int J Hyperthermia. 2020 07; 37(2):53-60. PMID: 32672122.
      Citations: 2     Fields:    Translation:Humans
    42. Bastos DCA, Rao G, Oliva ICG, Loree JM, Fuentes DT, Stafford RJ, Beechar VB, Weinberg JS, Shah K, Kumar VA, Prabhu SS. Predictors of Local Control of Brain Metastasis Treated With Laser Interstitial Thermal Therapy. Neurosurgery. 2020 07 01; 87(1):112-122. PMID: 31539421.
      Citations: 8     Fields:    Translation:HumansPHPublic Health
    43. Bastos DCA, Weinberg J, Kumar VA, Fuentes DT, Stafford J, Li J, Rao G, Prabhu SS. Laser Interstitial Thermal Therapy in the treatment of brain metastases and radiation necrosis. Cancer Lett. 2020 10 01; 489:9-18. PMID: 32504657.
      Citations: 6     Fields:    Translation:HumansPHPublic Health
    44. Moawad AW, Fuentes D, Khalaf AM, Blair KJ, Szklaruk J, Qayyum A, Hazle JD, Elsayes KM. Feasibility of Automated Volumetric Assessment of Large Hepatocellular Carcinomas' Responses to Transarterial Chemoembolization. Front Oncol. 2020; 10:572. PMID: 32457831; PMCID: PMC7221016.
      Citations: 2     
    45. Actor JA, Fuentes DT, Rivi?re B. Identification of Kernels in a Convolutional Neural Network: Connections Between Level Set Equation and Deep Learning for Image Segmentation. Proc SPIE Int Soc Opt Eng. 2020 Feb; 11313. PMID: 32377028; PMCID: PMC7202368.
      Citations:    
    46. Ahmed AA, Elmohr MM, Fuentes D, Habra MA, Fisher SB, Perrier ND, Zhang M, Elsayes KM. Radiomic mapping model for prediction of Ki-67 expression in adrenocortical carcinoma. Clin Radiol. 2020 06; 75(6):479.e17-479.e22. PMID: 32089260.
      Citations: 6     Fields:    Translation:Humans
    47. Papadopoulos C, Efthimiadou EK, Pissas M, Fuentes D, Boukos N, Psycharis V, Kordas G, Loukopoulos VC, Kagadis GC. Magnetic fluid hyperthermia simulations in evaluation of SAR calculation methods. Phys Med. 2020 Mar; 71:39-52. PMID: 32088564.
      Citations:    Fields:    Translation:Humans
    48. Gates EDH, Lin JS, Weinberg JS, Prabhu SS, Hamilton J, Hazle JD, Fuller GN, Baladandayuthapani V, Fuentes DT, Schellingerhout D. Imaging-Based Algorithm for the Local Grading of Glioma. AJNR Am J Neuroradiol. 2020 03; 41(3):400-407. PMID: 32029466; PMCID: PMC7077885.
      Citations: 5     Fields:    Translation:HumansCTClinical Trials
    49. Fuentes D, Fahrenholtz SJ, Guo C, MacLellan CJ, Layman RR, Stafford RJ, Cressman E, Rivi?re B. Mathematical modeling of mass and energy transport for thermoembolization. Int J Hyperthermia. 2020; 37(1):356-365. PMID: 32308071; PMCID: PMC10558277.
      Citations: 1     Fields:    Translation:Humans
    50. Butner JD, Fuentes D, Ozpolat B, Calin GA, Zhou X, Lowengrub J, Cristini V, Wang Z. A Multiscale Agent-Based Model of Ductal Carcinoma In Situ. IEEE Trans Biomed Eng. 2020 05; 67(5):1450-1461. PMID: 31603768; PMCID: PMC8445608.
      Citations: 9     Fields:    Translation:HumansCells
    51. Morshid A, Elsayes KM, Khalaf AM, Elmohr MM, Yu J, Kaseb AO, Hassan M, Mahvash A, Wang Z, Hazle JD, Fuentes D. A machine learning model to predict hepatocellular carcinoma response to transcatheter arterial chemoembolization. Radiol Artif Intell. 2019 Sep; 1(5). PMID: 31858078; PMCID: PMC6920060.
      Citations: 26     
    52. Thrower SL, Kandala SK, Fuentes D, Stefan W, Sowko N, Huang M, Mathieu K, Hazle JD. A compressed sensing approach to immobilized nanoparticle localization for superparamagnetic relaxometry. Phys Med Biol. 2019 09 23; 64(19):194001. PMID: 31422952.
      Citations: 1     Fields:    
    53. Khalaf AM, Fuentes D, Morshid A, Kaseb AO, Hassan M, Hazle JD, Elsayes KM. Hepatocellular carcinoma response to transcatheter arterial chemoembolisation using automatically generated pre-therapeutic tumour volumes by a random forest-based segmentation protocol. Clin Radiol. 2019 Dec; 74(12):974.e13-974.e20. PMID: 31521326.
      Citations:    Fields:    Translation:Humans
    54. Traylor JI, Bastos DCA, Fuentes D, Muir M, Patel R, Kumar VA, Stafford RJ, Rao G, Prabhu SS. Dynamic Contrast-Enhanced MRI in Patients with Brain Metastases Undergoing Laser Interstitial Thermal Therapy: A Pilot Study. AJNR Am J Neuroradiol. 2019 09; 40(9):1451-1457. PMID: 31371353; PMCID: PMC7048461.
      Citations:    
    55. Gates EDH, Yang J, Fukumura K, Lin JS, Weinberg JS, Prabhu SS, Long L, Fuentes D, Sulman EP, Huse JT, Schellingerhout D. Spatial Distance Correlates With Genetic Distance in Diffuse Glioma. Front Oncol. 2019; 9:676. PMID: 31417865; PMCID: PMC6682615.
      Citations: 4     
    56. Elmohr MM, Fuentes D, Habra MA, Bhosale PR, Qayyum AA, Gates E, Morshid AI, Hazle JD, Elsayes KM. Machine learning-based texture analysis for differentiation of large adrenal cortical tumours on CT. Clin Radiol. 2019 Oct; 74(10):818.e1-818.e7. PMID: 31362884.
      Citations: 8     Fields:    Translation:Humans
    57. Fuentes D, Ahmed K, Lin JS, Abdel-Wahab R, Kaseb AO, Hassan M, Szklaruk J, Morshid A, Hazle JD, Qayyum A, Elsayes KM. Automated Volumetric Assessment of Hepatocellular Carcinoma Response to Sorafenib: A Pilot Study. J Comput Assist Tomogr. 2019 May/Jun; 43(3):499-506. PMID: 31082956.
      Citations: 1     Fields:    Translation:Humans
    58. Gates EDH, Lin JS, Weinberg JS, Hamilton J, Prabhu SS, Hazle JD, Fuller GN, Baladandayuthapani V, Fuentes D, Schellingerhout D. Guiding the first biopsy in glioma patients using estimated Ki-67 maps derived from MRI: conventional versus advanced imaging. Neuro Oncol. 2019 03 18; 21(4):527-536. PMID: 30657997; PMCID: PMC6422438.
      Citations: 12     Fields:    Translation:HumansCTClinical Trials
    59. Walker CM, Fuentes D, Larson PEZ, Kundra V, Vigneron DB, Bankson JA. Effects of excitation angle strategy on quantitative analysis of hyperpolarized pyruvate. Magn Reson Med. 2019 06; 81(6):3754-3762. PMID: 30793791; PMCID: PMC6435389.
      Citations: 6     Fields:    
    60. Hormuth DA, Jarrett AM, Lima EABF, McKenna MT, Fuentes DT, Yankeelov TE. Mechanism-Based Modeling of Tumor Growth and Treatment Response Constrained by Multiparametric Imaging Data. JCO Clin Cancer Inform. 2019 02; 3:1-10. PMID: 30807209; PMCID: PMC6535803.
      Citations: 13     Fields:    Translation:Humans
    61. Beechar VB, Prabhu SS, Bastos D, Weinberg JS, Stafford RJ, Fuentes D, Hess KR, Rao G. Correction to: Volumetric response of progressing post-SRS lesions treated with laser interstitial thermal therapy. J Neurooncol. 2019 Jan; 141(2):475. PMID: 30635762.
      Citations:    Fields:    
    62. Fuentes D, Guo C, Polak U, Minhaj AA, Allen WJ, Gustin MC, Cressman ENK, Mu?oz NM. A molecular dynamics approach towards evaluating osmotic and thermal stress in the extracellular environment. Int J Hyperthermia. 2018; 35(1):559-567. PMID: 30303437.
      Citations:    Fields:    Translation:HumansCells
    63. Owens CA, Peterson CB, Tang C, Koay EJ, Yu W, Mackin DS, Li J, Salehpour MR, Fuentes DT, Court LE, Yang J. Lung tumor segmentation methods: Impact on the uncertainty of radiomics features for non-small cell lung cancer. PLoS One. 2018; 13(10):e0205003. PMID: 30286184; PMCID: PMC6171919.
      Citations: 24     Fields:    Translation:Humans
    64. Khalaf AM, Fuentes D, Morshid AI, Burke MR, Kaseb AO, Hassan M, Hazle JD, Elsayes KM. Role of Wnt/?-catenin signaling in hepatocellular carcinoma, pathogenesis, and clinical significance. J Hepatocell Carcinoma. 2018; 5:61-73. PMID: 29984212; PMCID: PMC6027703.
      Citations: 62     
    65. Mitchell D, Fahrenholtz S, MacLellan C, Bastos D, Rao G, Prabhu S, Weinberg J, Hazle J, Stafford J, Fuentes D. A heterogeneous tissue model for treatment planning for magnetic resonance-guided laser interstitial thermal therapy. Int J Hyperthermia. 2018 11; 34(7):943-952. PMID: 29343140.
      Citations: 2     Fields:    Translation:Humans
    66. Beechar VB, Prabhu SS, Bastos D, Weinberg JS, Stafford RJ, Fuentes D, Hess KR, Rao G. Volumetric response of progressing post-SRS lesions treated with laser interstitial thermal therapy. J Neurooncol. 2018 Mar; 137(1):57-65. PMID: 29204838; PMCID: PMC5823725.
      Citations: 12     Fields:    Translation:Humans
    67. MacLellan CJ, Fuentes D, Prabhu S, Rao G, Weinberg JS, Hazle JD, Stafford RJ. A methodology for thermal dose model parameter development using perioperative MRI. Int J Hyperthermia. 2018 09; 34(6):687-696. PMID: 28830311.
      Citations: 1     Fields:    Translation:Humans
    68. Melancon MP, Appleton Figueira T, Fuentes DT, Tian L, Qiao Y, Gu J, Gagea M, Ensor JE, Maldonado KL, Dixon K, McWatters A, Mitchell J, McArthur M, Gupta S, Tam AL, Mu?oz NM. Development of an Electroporation and Nanoparticle-based Therapeutic Platform for Bone Metastases. Radiology. 2018 01; 286(1):149-157. PMID: 28825892.
      Citations: 8     Fields:    Translation:AnimalsCells
    69. Sovizi J, Mathieu KB, Thrower SL, Stefan W, Hazle JD, Fuentes D. Gaussian process classification of superparamagnetic relaxometry data: Phantom study. Artif Intell Med. 2017 Oct; 82:47-59. PMID: 28911905.
      Citations: 1     Fields:    Translation:Animals
    70. Mitcham T, Taghavi H, Long J, Wood C, Fuentes D, Stefan W, Ward J, Bouchard R. Photoacoustic-based sO2 estimation through excised bovine prostate tissue with interstitial light delivery. Photoacoustics. 2017 Sep; 7:47-56. PMID: 28794990; PMCID: PMC5540703.
      Citations: 12     
    71. Yung JP, Fuentes D, MacLellan CJ, Maier F, Liapis Y, Hazle JD, Stafford RJ. Referenceless magnetic resonance temperature imaging using Gaussian process modeling. Med Phys. 2017 Jul; 44(7):3545-3555. PMID: 28317125.
      Citations: 2     Fields:    Translation:HumansAnimals
    72. Fahrenholtz SJ, Madankan R, Danish S, Hazle JD, Stafford RJ, Fuentes D. Theoretical model for laser ablation outcome predictions in brain: calibration and validation on clinical MR thermometry images. Int J Hyperthermia. 2018 02; 34(1):101-111. PMID: 28540820; PMCID: PMC6295207.
      Citations: 2     Fields:    Translation:Humans
    73. Lin JS, Fuentes DT, Chandler A, Prabhu SS, Weinberg JS, Baladandayuthapani V, Hazle JD, Schellingerhout D. Performance Assessment for Brain MR Imaging Registration Methods. AJNR Am J Neuroradiol. 2017 May; 38(5):973-980. PMID: 28279984; PMCID: PMC7960398.
      Citations: 8     Fields:    Translation:Humans
    74. Madankan R, Stefan W, Fahrenholtz SJ, MacLellan CJ, Hazle JD, Stafford RJ, Weinberg JS, Rao G, Fuentes D. Accelerated magnetic resonance thermometry in the presence of uncertainties. Phys Med Biol. 2017 01 07; 62(1):214-245. PMID: 27991449.
      Citations:    Fields:    Translation:Humans
    75. Tam AL, Figueira TA, Gagea M, Ensor JE, Dixon K, McWatters A, Gupta S, Fuentes DT. Irreversible Electroporation in the Epidural Space of the Porcine Spine: Effects on Adjacent Structures. Radiology. 2016 Dec; 281(3):763-771. PMID: 27266723; PMCID: PMC5952366.
      Citations: 3     Fields:    Translation:Animals
    76. Bankson JA, Walker CM, Ramirez MS, Stefan W, Fuentes D, Merritt ME, Lee J, Sandulache VC, Chen Y, Phan L, Chou PC, Rao A, Yeung SC, Lee MH, Schellingerhout D, Conrad CA, Malloy C, Sherry AD, Lai SY, Hazle JD. Kinetic Modeling and Constrained Reconstruction of Hyperpolarized [1-13C]-Pyruvate Offers Improved Metabolic Imaging of Tumors. Cancer Res. 2015 Nov 15; 75(22):4708-17. PMID: 26420214; PMCID: PMC4651725.
      Citations: 39     Fields:    Translation:HumansAnimalsCells
    77. Fahrenholtz SJ, Moon TY, Franco M, Medina D, Danish S, Gowda A, Shetty A, Maier F, Hazle JD, Stafford RJ, Warburton T, Fuentes D. A model evaluation study for treatment planning of laser-induced thermal therapy. Int J Hyperthermia. 2015; 31(7):705-14. PMID: 26368014; PMCID: PMC4904296.
      Citations: 3     Fields:    Translation:Humans
    78. Fuentes D, Contreras J, Yu J, He R, Castillo E, Castillo R, Guerrero T. Morphometry-based measurements of the structural response to whole-brain radiation. Int J Comput Assist Radiol Surg. 2015 Apr; 10(4):393-401. PMID: 25408306; PMCID: PMC4505795.
      Citations: 7     Fields:    Translation:Humans
    79. Maier F, Fuentes D, Weinberg JS, Hazle JD, Stafford RJ. Robust phase unwrapping for MR temperature imaging using a magnitude-sorted list, multi-clustering algorithm. Magn Reson Med. 2015 Apr; 73(4):1662-8. PMID: 24809984; PMCID: PMC4224999.
      Citations: 3     Fields:    Translation:Humans
    80. Castillo E, Castillo R, Fuentes D, Guerrero T. Computing global minimizers to a constrained B-spline image registration problem from optimal l1 perturbations to block match data. Med Phys. 2014 Apr; 41(4):041904. PMID: 24694135; PMCID: PMC3978330.
      Citations: 4     Fields:    Translation:Humans
    81. MacLellan CJ, Fuentes D, Elliott AM, Schwartz J, Hazle JD, Stafford RJ. Estimating nanoparticle optical absorption with magnetic resonance temperature imaging and bioheat transfer simulation. Int J Hyperthermia. 2014 Feb; 30(1):47-55. PMID: 24350668; PMCID: PMC4060598.
      Citations: 3     Fields:    Translation:Cells
    82. Yeniaras E, Fuentes DT, Fahrenholtz SJ, Weinberg JS, Maier F, Hazle JD, Stafford RJ. Design and initial evaluation of a treatment planning software system for MRI-guided laser ablation in the brain. Int J Comput Assist Radiol Surg. 2014 Jul; 9(4):659-67. PMID: 24091853.
      Citations: 8     Fields:    Translation:Humans
    83. Fahrenholtz SJ, Stafford RJ, Maier F, Hazle JD, Fuentes D. Generalised polynomial chaos-based uncertainty quantification for planning MRgLITT procedures. Int J Hyperthermia. 2013 Jun; 29(4):324-35. PMID: 23692295; PMCID: PMC3924420.
      Citations: 6     Fields:    Translation:Animals
    84. Castillo R, Castillo E, Fuentes D, Ahmad M, Wood AM, Ludwig MS, Guerrero T. A reference dataset for deformable image registration spatial accuracy evaluation using the COPDgene study archive. Phys Med Biol. 2013 May 07; 58(9):2861-77. PMID: 23571679; PMCID: PMC3677192.
      Citations: 25     Fields:    Translation:Humans
    85. Fuentes D, Elliott A, Weinberg JS, Shetty A, Hazle JD, Stafford RJ. An inverse problem approach to recovery of in vivo nanoparticle concentrations from thermal image monitoring of MR-guided laser induced thermal therapy. Ann Biomed Eng. 2013 Jan; 41(1):100-11. PMID: 22918665; PMCID: PMC3524364.
      Citations: 5     Fields:    Translation:Animals
    86. Fahrenholtz S, Fuentes D, Stafford R, Hazle J. SU-F-BRCD-08: Uncertainty Quantification by Generalized Polynomial Chaos for MR-Guided Laser Induced Thermal Therapy. Med Phys. 2012 Jun; 39(6Part20):3857. PMID: 28517533.
      Citations: 2     Fields:    
    87. Yung J, Fuentes D, Hazle J, Stafford R. SU-E-J-53: A Phantom Validation Study of a 3D Background Phase Model for MR Thermometry. Med Phys. 2012 Jun; 39(6Part6):3664. PMID: 28517568.
      Citations:    Fields:    
    88. Fuentes D, Yung J, Hazle JD, Weinberg JS, Stafford RJ. Kalman filtered MR temperature imaging for laser induced thermal therapies. IEEE Trans Med Imaging. 2012 Apr; 31(4):984-94. PMID: 22203706; PMCID: PMC3873725.
      Citations: 7     Fields:    Translation:Humans
    89. Fuentes D, Walker C, Elliott A, Shetty A, Hazle JD, Stafford RJ. Magnetic resonance temperature imaging validation of a bioheat transfer model for laser-induced thermal therapy. Int J Hyperthermia. 2011; 27(5):453-64. PMID: 21756043; PMCID: PMC3930085.
      Citations: 13     Fields:    Translation:Animals
    90. Feng Y, Fuentes D. Model-based planning and real-time predictive control for laser-induced thermal therapy. Int J Hyperthermia. 2011; 27(8):751-61. PMID: 22098360; PMCID: PMC3930104.
      Citations: 10     Fields:    Translation:Humans
    91. Fuentes D, Cardan R, Stafford RJ, Yung J, Dodd GD, Feng Y. High-fidelity computer models for prospective treatment planning of radiofrequency ablation with in vitro experimental correlation. J Vasc Interv Radiol. 2010 Nov; 21(11):1725-32. PMID: 20920840; PMCID: PMC2966506.
      Citations: 9     Fields:    Translation:Animals
    92. Fuentes D, Feng Y, Elliott A, Shetty A, McNichols RJ, Oden JT, Stafford RJ. Adaptive real-time bioheat transfer models for computer-driven MR-guided laser induced thermal therapy. IEEE Trans Biomed Eng. 2010 May; 57(5):1024-30. PMID: 20142153; PMCID: PMC3857613.
      Citations: 11     Fields:    Translation:HumansAnimalsCells
    93. Stafford RJ, Fuentes D, Elliott AA, Weinberg JS, Ahrar K. Laser-induced thermal therapy for tumor ablation. Crit Rev Biomed Eng. 2010; 38(1):79-100. PMID: 21175405.
      Citations: 63     Fields:    Translation:Humans
    94. Fuentes D, Oden JT, Diller KR, Hazle JD, Elliott A, Shetty A, Stafford RJ. Computational modeling and real-time control of patient-specific laser treatment of cancer. Ann Biomed Eng. 2009 Apr; 37(4):763-82. PMID: 19148754; PMCID: PMC4064943.
      Citations: 16     Fields:    Translation:HumansAnimals
    95. Feng Y, Fuentes D, Hawkins A, Bass J, Rylander MN, Elliott A, Shetty A, Stafford RJ, Oden JT. Nanoshell-mediated laser surgery simulation for prostate cancer treatment. Eng Comput. 2009; 25(1):3-13. PMID: 20648233; PMCID: PMC2905827.
      Citations: 13     
    96. Feng Y, Fuentes D, Hawkins A, Bass JM, Rylander MN. Optimization and real-time control for laser treatment of heterogeneous soft tissues. Comput Methods Appl Mech Eng. 2009; 198(21):1742-1750. PMID: 20485457; PMCID: PMC2871336.
      Citations: 3     
    97. Oden JT, Diller KR, Bajaj C, Browne JC, Hazle J, Bass J, Biduat L, Demkowicz L, Elliott A, Feng Y, Fuentes D, Prudhomme S, Rylander MN, Stafford RJ, Zhang Y, Babu?ka I. Dynamic Data-Driven Finite Element Models for Laser Treatment of Cancer. Numer Methods Partial Differ Equ. 2007 Apr 26; 23(4):904-922. PMID: 20376194; PMCID: PMC2850081.
      Citations: 8     
    98. A model evaluation study for treatment planning of laser-induced thermal therapy. International Journal of Hyperthermia. 31:705-714.
    99. Optimization and real-time control for laser treatment of heterogeneous soft tissues. Computer Methods in Applied Mechanics and Engineering. 198:1742-1750.
    100. MRTI-based optimization and real-time laser surgical control for cancer treatment using fast inverse analysis techniques. 168-172.
    101. Nanoshell-mediated laser surgery simulation for prostate cancer treatment. Engineering with Computers. 25:3-13.
    102. Dynamic data-driven finite element models for laser treatment of cancer. Numerical Methods for Partial Differential Equations. 23:904-922.
    103. Kinetic modeling and constrained reconstruction of hyperpolarized [1-13C]-pyruvate offers improved metabolic imaging of tumors. Cancer Research. 75:4708-4717.
    104. Irreversible electroporation in the epidural space of the porcine spine. Radiology. 281:763-771.
    105. Toward Predictive Multiscale Modeling of Vascular Tumor Growth. Archives of Computational Methods in Engineering.
    106. Extensions of goal-oriented error estimation methods to simulations of highly-nonlinear response of shock-loaded elastomer-reinforced structures. Computer Methods in Applied Mechanics and Engineering. 195:4659-4680.
    107. Model-based real-time control for laser induced thermal therapy with applications to prostate cancer treatment.
    108. Real-time predictive surgical control for cancer treatment using laser ablation. IEEE Signal Processing Magazine. 28:134-138.
    109. Development of a computational paradigm for laser treatment of cancer. 530-537.
    110. Accelerated magnetic resonance thermometry in the presence of uncertainties. Physics in Medicine and Biology. 62:214-245.
    111. Using cyber-infrastructure for dynamic data driven laser treatment of cancer. 972-979.
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