SAMIRHANASHSAMIR HANASH9846HANASH, SAMIRProfessorprns:coAuthorOfcoauthor ofFaculty Rankprns:fullNamefull nameprns:hasAuthorListauthor listprns:hasFacultyRankhas faculty rankprns:hasNetworkhas networkprns:hasPublicationVenuepublished inprns:informationResourceReferenceinformation resource referenceprns:isPrimaryPositionis primary positionprns:maxWeightmaximum weightprns:medlineTAjournal title abbreviationprns:meshDescriptorUIMeSH DescriptorUIprns:meshSemanticGroupNameMeSH semantic group nameprns:minWeightminimum weightprns:numberOfAuthorsnumber of authorsprns:numberOfConnectionsnumber of connectionsprns:numberOfPublicationsnumber of publicationsprns:personIdPerson IDprns:personInPrimaryPositionperson in primary positionprns:positionInDepartmentposition in departmentprns:positionInDivisionposition in divisionprns:predicateNodepredicate nodeprns:publicationDatepublication dateprns:similarTosimilar toprns:sortOrdersort orderprns:uniquenessWeightuniqueness weightprns:yearyearAcademic ArticleArticleDocumentbibo:pmidPubMed IdentifierAddressvivo:address1address line 1vivo:addressCitycityvivo:addressPostalCodepostal codevivo:addressStatestate or provincevivo:authorInAuthorshipselected publicationsvivo:authorRankauthor rank in publicationAuthorshipDepartmentDivisionvivo:hasResearchArearesearch areasvivo:hrJobTitleHR job titleInformation Resourcevivo:linkedAuthorlinked authorvivo:linkedInformationResourcelinked information resourcevivo:mailingAddressmailing addressvivo:personInPositionpositionsPositionvivo:positionInOrganizationposition in organizationvivo:preferredTitlepreferred titlerdf:predicatepredicaterdf:typetyperdfs:labellabelConceptAgentfoaf:firstNamefirst namefoaf:lastNamelast nameOrganizationPerson25774287Suo J, Medina D, Herrera S, Zheng ZY, Jin L, Chamness GC, Contreras A, Gutierrez C, Hilsenbeck S, Umar A, Foekens JA, Hanash S, Schiff R, Zhang XH, Chang ECCell & bioscienceInt6 reduction activates stromal fibroblasts to enhance transforming activity in breast epithelial cells. Cell Biosci. 2015; 5:10.Cell Biosci2015-03-08T00:00:002015Int6 reduction activates stromal fibroblasts to enhance transforming activity in breast epithelial cells.6767 Bertner StHouston77030-2603TXAuthorship 1633463Authorship 1635143Authorship 1635208Authorship 1637702Authorship 1638981Authorship 1642691Authorship 1644441Authorship 1645463Authorship 1646615Authorship 1650987Authorship 1651321Authorship 1655111Authorship 1655433Authorship 16577010Authorship 1664786Authorship 1666528Authorship 1667224Authorship 1668252Authorship 1678768Authorship 1678914Authorship 1682905Authorship 1685857Authorship 1706531Authorship 17101610Authorship 1710385Authorship 17104911Authorship 1713123Authorship 1715018Authorship 1715236Authorship 1715336Authorship 1717272Authorship 1719892Authorship 1720156Authorship 1723701Authorship 1725902Authorship 1726052Authorship 17270313Authorship 1732289Authorship 1733561Authorship 17364223Authorship 1737264Authorship 17386715Authorship 1741689Authorship 1742851Authorship 1743268Authorship 17496611Authorship 1753098Authorship 1757037Authorship 1757424Authorship 17593611Authorship 1772483Authorship 1777307Authorship 17784813Authorship 1780125Authorship 1788225Authorship 17998612Authorship 1803342Authorship 18046716Authorship 18050216Authorship 1806733Authorship 18129816Authorship 1813347Authorship 1819486Authorship 18425211Authorship 18446112Authorship 18481316Authorship 1849201Authorship 1856941Authorship 1863322Authorship 1890095Authorship 18924713Authorship 1894564Authorship 1904712Authorship 19078517Authorship 19112722Authorship 19305515593335Hanash SM, Winter WP, Rucknagel DLNatureSynthesis of haemoglobin Wayne in erythroid cells. Nature. 1977 Oct 20; 269(5630):717-9.Nature1977-10-20T00:00:001977Synthesis of haemoglobin Wayne in erythroid cells.1495998Kuick RD, Neel JV, Strahler JR, Chu EH, Bargal R, Fox DA, Hanash SMProceedings of the National Academy of Sciences of the United States of AmericaSimilarity of spontaneous germinal and in vitro somatic cell mutation rates in humans: implications for carcinogenesis and for the role of exogenous factors in "spontaneous" germinal mutagenesis. Proc Natl Acad Sci U S A. 1992 Aug 01; 89(15):7036-40.Proc Natl Acad Sci U S A1992-08-01T00:00:001992Similarity of spontaneous germinal and in vitro somatic cell mutation rates in humans: implications for carcinogenesis and for the role of exogenous factors in "spontaneous" germinal mutagenesis.1998499Strahler JR, Kuick R, Hanash SMBiochemical and biophysical research communicationsDiminished phosphorylation of a heat shock protein (HSP 27) in infant acute lymphoblastic leukemia. Biochem Biophys Res Commun. 1991 Feb 28; 175(1):134-42.Biochem Biophys Res Commun1991-02-28T00:00:001991Diminished phosphorylation of a heat shock protein (HSP 27) in infant acute lymphoblastic leukemia.2278968Ferrari AC, Seuanez HN, Hanash SM, Atweh GFGenes, chromosomes & cancerA gene that encodes for a leukemia-associated phosphoprotein (p18) maps to chromosome bands 1p35-36.1. Genes Chromosomes Cancer. 1990 Jul; 2(2):125-9.Genes Chromosomes Cancer1990-07-01T00:00:001990A gene that encodes for a leukemia-associated phosphoprotein (p18) maps to chromosome bands 1p35-36.1.2295696Strahler JR, Kuick R, Eckerskorn C, Lottspeich F, Richardson BC, Fox DA, Stoolman LM, Hanson CA, Nichols D, Tueche HJThe Journal of clinical investigationIdentification of two related markers for common acute lymphoblastic leukemia as heat shock proteins. J Clin Invest. 1990 Jan; 85(1):200-7.J Clin Invest1990-01-01T00:00:001990Identification of two related markers for common acute lymphoblastic leukemia as heat shock proteins.2915694Hanash SM, Strahler JRNatureAdvances in two-dimensional electrophoresis. Nature. 1989 Feb 02; 337(6206):485-6.Nature1989-02-02T00:00:001989Advances in two-dimensional electrophoresis.2976630Hanash SM, Kuick R, Nichols D, Stoolman LDisease markersQuantitative analysis of a new marker for common acute lymphoblastic leukemia detected by two-dimensional electrophoresis. Dis Markers. 1988 Oct-Dec; 6(4):209-20.Dis Markers1988-10-01T00:00:001988Quantitative analysis of a new marker for common acute lymphoblastic leukemia detected by two-dimensional electrophoresis.3234354Kuick RD, Hanash SM, Strahler JRElectrophoresisSomatic mutation studies in human lymphoid cells: the detectability of quantitative genetic variants in two-dimensional gels. Electrophoresis. 1988 Apr; 9(4):192-8.Electrophoresis1988-04-01T00:00:001988Somatic mutation studies in human lymphoid cells: the detectability of quantitative genetic variants in two-dimensional gels.3402732Chu EH, Boehnke M, Hanash SM, Kuick RD, Lamb BJ, Neel JV, Niezgoda W, Pivirotto S, Sundling GGeneticsEstimation of mutation rates based on the analysis of polypeptide constituents of cultured human lymphoblastoid cells. Genetics. 1988 Jul; 119(3):693-703.Genetics1988-07-01T00:00:001988Estimation of mutation rates based on the analysis of polypeptide constituents of cultured human lymphoblastoid cells.3422414Hanash SM, Boehnke M, Chu EH, Neel JV, Kuick RDProceedings of the National Academy of Sciences of the United States of AmericaNonrandom distribution of structural mutants in ethylnitrosourea-treated cultured human lymphoblastoid cells. Proc Natl Acad Sci U S A. 1988 Jan; 85(1):165-9.Proc Natl Acad Sci U S A1988-01-01T00:00:001988Nonrandom distribution of structural mutants in ethylnitrosourea-treated cultured human lymphoblastoid cells.6951652Hanash SM, Tubergen DG, Heyn RM, Neel JV, Sandy L, Stevens GS, Rosenblum BB, Krzesicki RFClinical chemistryTwo-dimensional gel electrophoresis of cell proteins in childhood leukemia, with silver staining: a preliminary report. Clin Chem. 1982 Apr; 28(4 Pt 2):1026-30.Clin Chem1982-04-01T00:00:001982Two-dimensional gel electrophoresis of cell proteins in childhood leukemia, with silver staining: a preliminary report.7495303Sullivan KA, Castle VP, Hanash SM, Feldman ELThe American journal of pathologyInsulin-like growth factor II in the pathogenesis of human neuroblastoma. Am J Pathol. 1995 Dec; 147(6):1790-8.Am J Pathol1995-12-01T00:00:001995Insulin-like growth factor II in the pathogenesis of human neuroblastoma.7747402Hailata N, Johnson R, al-Bagdadi F, Hanash SVeterinary immunology and immunopathologyProliferating cell nuclear antigen expression in sheep infected with bovine leukemia virus. Vet Immunol Immunopathol. 1995 Feb; 44(3-4):211-22.Vet Immunol Immunopathol1995-02-01T00:00:001995Proliferating cell nuclear antigen expression in sheep infected with bovine leukemia virus.8047138Chang CL, Zhu XX, Thoraval DH, Ungar D, Rawwas J, Hora N, Strahler JR, Hanash SM, Radany ENatureNm23-H1 mutation in neuroblastoma. Nature. 1994 Aug 04; 370(6488):335-6.Nature1994-08-04T00:00:001994Nm23-H1 mutation in neuroblastoma.8093685Keim DR, Hailat N, Kuick R, Reynolds CP, Brodeur GM, Seeger RC, Hanash SMClinical & experimental metastasisPCNA levels in neuroblastoma are increased in tumors with an amplified N-myc gene and in metastatic stage tumors. Clin Exp Metastasis. 1993 Jan; 11(1):83-90.Clin Exp Metastasis1993-01-01T00:00:001993PCNA levels in neuroblastoma are increased in tumors with an amplified N-myc gene and in metastatic stage tumors.8713743Hailat NQ, Hanash SMIndian journal of biochemistry & biophysicsA technique for identification of cellular proteins by western immunoblotting and immunoautoradiography of 2-D PAGE. Indian J Biochem Biophys. 1995 Oct; 32(5):240-4.Indian J Biochem Biophys1995-10-01T00:00:001995A technique for identification of cellular proteins by western immunoblotting and immunoautoradiography of 2-D PAGE.8755237Qian MG, Zheng K, Chen Y, Chang CL, Hanash SM, Lubman DMRapid communications in mass spectrometry : RCMCapillary liquid chromatography coupled with an ion trap storage/reflectron time-of-flight mass spectrometer for structural confirmation of three recombinant protein isoforms. Rapid Commun Mass Spectrom. 1996; 10(9):1079-87.Rapid Commun Mass Spectrom1996-01-01T00:00:001996Capillary liquid chromatography coupled with an ion trap storage/reflectron time-of-flight mass spectrometer for structural confirmation of three recombinant protein isoforms.8781374Satoh C, Takahashi N, Asakawa J, Kodaira M, Kuick R, Hanash SM, Neel JVEnvironmental health perspectivesGenetic analysis of children of atomic bomb survivors. Environ Health Perspect. 1996 May; 104 Suppl 3:511-9.Environ Health Perspect1996-05-01T00:00:001996Genetic analysis of children of atomic bomb survivors.8954793Wimmer K, Thoraval D, Asakawa J, Kuick R, Kodaira M, Lamb B, Fawcett J, Glover T, Cram S, Hanash SGenomicsTwo-dimensional separation and cloning of chromosome 1 NotI-EcoRV-derived genomic fragments. Genomics. 1996 Dec 01; 38(2):124-32.Genomics1996-12-01T00:00:001996Two-dimensional separation and cloning of chromosome 1 NotI-EcoRV-derived genomic fragments.9770500Hughes SJ, Glover TW, Zhu XX, Kuick R, Thoraval D, Orringer MB, Beer DG, Hanash SProceedings of the National Academy of Sciences of the United States of AmericaA novel amplicon at 8p22-23 results in overexpression of cathepsin B in esophageal adenocarcinoma. Proc Natl Acad Sci U S A. 1998 Oct 13; 95(21):12410-5.Proc Natl Acad Sci U S A1998-10-13T00:00:001998A novel amplicon at 8p22-23 results in overexpression of cathepsin B in esophageal adenocarcinoma.9792444Deng C, Yang J, Scott J, Hanash S, Richardson BCBiological chemistryRole of the ras-MAPK signaling pathway in the DNA methyltransferase response to DNA hypomethylation. Biol Chem. 1998 Aug-Sep; 379(8-9):1113-20.Biol Chem1998-08-01T00:00:001998Role of the ras-MAPK signaling pathway in the DNA methyltransferase response to DNA hypomethylation.10740846Wall DB, Kachman MT, Gong S, Hinderer R, Parus S, Misek DE, Hanash SM, Lubman DMAnalytical chemistryIsoelectric focusing nonporous RP HPLC: a two-dimensional liquid-phase separation method for mapping of cellular proteins with identification using MALDI-TOF mass spectrometry. Anal Chem. 2000 Mar 15; 72(6):1099-111.Anal Chem2000-03-15T00:00:002000Isoelectric focusing nonporous RP HPLC: a two-dimensional liquid-phase separation method for mapping of cellular proteins with identification using MALDI-TOF mass spectrometry.11464909Hiyama E, Hiyama K, Ohtsu K, Yamaoka H, Fukuba I, Matsuura Y, Yokoyama TMedical and pediatric oncologyBiological characteristics of neuroblastoma with partial deletion in the short arm of chromosome 1. Med Pediatr Oncol. 2001 Jan; 36(1):67-74.Med Pediatr Oncol2001-01-01T00:00:002001Biological characteristics of neuroblastoma with partial deletion in the short arm of chromosome 1.11721642Oh JM, Brichory F, Puravs E, Kuick R, Wood C, Rouillard JM, Tra J, Kardia S, Beer D, Hanash SProteomicsA database of protein expression in lung cancer. Proteomics. 2001 Oct; 1(10):1303-19.Proteomics2001-10-01T00:00:002001A database of protein expression in lung cancer.11774034Erson AE, Niell BL, DeMers SK, Rouillard JM, Hanash SM, Petty EMNeoplasia (New York, N.Y.)Overexpressed genes/ESTs and characterization of distinct amplicons on 17q23 in breast cancer cells. Neoplasia. 2001 Nov-Dec; 3(6):521-6.Neoplasia2001-11-01T00:00:002001Overexpressed genes/ESTs and characterization of distinct amplicons on 17q23 in breast cancer cells.11922601Chang CL, Hora N, Huberman N, Hinderer R, Kukuruga M, Hanash SMProteomicsOncoprotein 18 levels and phosphorylation mediate megakaryocyte polyploidization in human erythroleukemia cells. Proteomics. 2001 Nov; 1(11):1415-23.Proteomics2001-11-01T00:00:002001Oncoprotein 18 levels and phosphorylation mediate megakaryocyte polyploidization in human erythroleukemia cells.11940574Leung JY, Kolligs FT, Wu R, Zhai Y, Kuick R, Hanash S, Cho KR, Fearon ERThe Journal of biological chemistryActivation of AXIN2 expression by beta-catenin-T cell factor. A feedback repressor pathway regulating Wnt signaling. J Biol Chem. 2002 Jun 14; 277(24):21657-65.J Biol Chem2002-04-08T00:00:002002Activation of AXIN2 expression by beta-catenin-T cell factor. A feedback repressor pathway regulating Wnt signaling.12511908Hanash SNature biotechnologyHarnessing immunity for cancer marker discovery. Nat Biotechnol. 2003 Jan; 21(1):37-8.Nat Biotechnol2003-01-01T00:00:002003Harnessing immunity for cancer marker discovery.12625782Wang H, Hanash SMTechnology in cancer research & treatmentContributions of proteome profiling to the molecular analysis of cancer. Technol Cancer Res Treat. 2002 Aug; 1(4):237-46.Technol Cancer Res Treat2002-08-01T00:00:002002Contributions of proteome profiling to the molecular analysis of cancer.12634796Hanash SNatureDisease proteomics. Nature. 2003 Mar 13; 422(6928):226-32.Nature2003-03-13T00:00:002003Disease proteomics.12707044Wu R, Lin L, Beer DG, Ellenson LH, Lamb BJ, Rouillard JM, Kuick R, Hanash S, Schwartz DR, Fearon ER, Cho KRThe American journal of pathologyAmplification and overexpression of the L-MYC proto-oncogene in ovarian carcinomas. Am J Pathol. 2003 May; 162(5):1603-10.Am J Pathol2003-05-01T00:00:002003Amplification and overexpression of the L-MYC proto-oncogene in ovarian carcinomas.12750293Logsdon CD, Simeone DM, Binkley C, Arumugam T, Greenson JK, Giordano TJ, Misek DE, Kuick R, Hanash SCancer researchMolecular profiling of pancreatic adenocarcinoma and chronic pancreatitis identifies multiple genes differentially regulated in pancreatic cancer. Cancer Res. 2003 May 15; 63(10):2649-57.Cancer Res2003-05-15T00:00:002003Molecular profiling of pancreatic adenocarcinoma and chronic pancreatitis identifies multiple genes differentially regulated in pancreatic cancer.14595819Bouwman K, Qiu J, Zhou H, Schotanus M, Mangold LA, Vogt R, Erlandson E, Trenkle J, Partin AW, Misek D, Omenn GS, Haab BB, Hanash SProteomicsMicroarrays of tumor cell derived proteins uncover a distinct pattern of prostate cancer serum immunoreactivity. Proteomics. 2003 Nov; 3(11):2200-7.Proteomics2003-11-01T00:00:002003Microarrays of tumor cell derived proteins uncover a distinct pattern of prostate cancer serum immunoreactivity.15086970Gharib TG, Chen G, Huang CC, Misek DE, Iannettoni MD, Hanash SM, Orringer MB, Beer DGClinical lung cancerGenomic and proteomic analyses of vascular endothelial growth factor and insulin-like growth factor-binding protein 3 in lung adenocarcinomas. Clin Lung Cancer. 2004 Mar; 5(5):307-12.Clin Lung Cancer2004-03-01T00:00:002004Genomic and proteomic analyses of vascular endothelial growth factor and insulin-like growth factor-binding protein 3 in lung adenocarcinomas.15251063Hanash SM, Beretta LMBriefings in functional genomics & proteomicsOperomics: integrated genomic and proteomic profiling of cells and tissues. Brief Funct Genomic Proteomic. 2002 Feb; 1(1):10-22.Brief Funct Genomic Proteomic2002-02-01T00:00:002002Operomics: integrated genomic and proteomic profiling of cells and tissues.15389852Wang H, Hanash SMass spectrometry reviewsIntact-protein based sample preparation strategies for proteome analysis in combination with mass spectrometry. Mass Spectrom Rev. 2005 May-Jun; 24(3):413-26.Mass Spectrom Rev2005-05-01T00:00:002005Intact-protein based sample preparation strategies for proteome analysis in combination with mass spectrometry.15613481Nam MJ, Kee MK, Kuick R, Hanash SMThe Journal of biological chemistryIdentification of defensin alpha6 as a potential biomarker in colon adenocarcinoma. J Biol Chem. 2005 Mar 04; 280(9):8260-5.J Biol Chem2004-12-21T00:00:002004Identification of defensin alpha6 as a potential biomarker in colon adenocarcinoma.15701842Dobbin KK, Beer DG, Meyerson M, Yeatman TJ, Gerald WL, Jacobson JW, Conley B, Buetow KH, Heiskanen M, Simon RM, Minna JD, Girard L, Misek DE, Taylor JM, Hanash S, Naoki K, Hayes DN, Ladd-Acosta C, Enkemann SA, Viale A, Giordano TJClinical cancer research : an official journal of the American Association for Cancer ResearchInterlaboratory comparability study of cancer gene expression analysis using oligonucleotide microarrays. Clin Cancer Res. 2005 Jan 15; 11(2 Pt 1):565-72.Clin Cancer Res2005-01-15T00:00:002005Interlaboratory comparability study of cancer gene expression analysis using oligonucleotide microarrays.15703445Wang H, Clouthier SG, Galchev V, Misek DE, Duffner U, Min CK, Zhao R, Tra J, Omenn GS, Ferrara JL, Hanash SMMolecular & cellular proteomics : MCPIntact-protein-based high-resolution three-dimensional quantitative analysis system for proteome profiling of biological fluids. Mol Cell Proteomics. 2005 May; 4(5):618-25.Mol Cell Proteomics2005-02-09T00:00:002005Intact-protein-based high-resolution three-dimensional quantitative analysis system for proteome profiling of biological fluids.15929745Li JY, Kuick R, Thompson RC, Misek DE, Lai YM, Liu YQ, Chai BX, Hanash SM, Gantz IJournal of neuroendocrinologyArcuate nucleus transcriptome profiling identifies ankyrin repeat and suppressor of cytokine signalling box-containing protein 4 as a gene regulated by fasting in central nervous system feeding circuits. J Neuroendocrinol. 2005 Jun; 17(6):394-404.J Neuroendocrinol2005-06-01T00:00:002005Arcuate nucleus transcriptome profiling identifies ankyrin repeat and suppressor of cytokine signalling box-containing protein 4 as a gene regulated by fasting in central nervous system feeding circuits.15994917Rozek LS, Lipkin SM, Fearon ER, Hanash S, Giordano TJ, Greenson JK, Kuick R, Misek DE, Taylor JM, Douglas JA, Rennert G, Gruber SBCancer researchCDX2 polymorphisms, RNA expression, and risk of colorectal cancer. Cancer Res. 2005 Jul 01; 65(13):5488-92.Cancer Res2005-07-01T00:00:002005CDX2 polymorphisms, RNA expression, and risk of colorectal cancer.16525410States DJ, Omenn GS, Blackwell TW, Fermin D, Eng J, Speicher DW, Hanash SMNature biotechnologyChallenges in deriving high-confidence protein identifications from data gathered by a HUPO plasma proteome collaborative study. Nat Biotechnol. 2006 Mar; 24(3):333-8.Nat Biotechnol2006-03-01T00:00:002006Challenges in deriving high-confidence protein identifications from data gathered by a HUPO plasma proteome collaborative study.16762624Chignard N, Shang S, Wang H, Marrero J, Br?chot C, Hanash S, Beretta LGastroenterologyCleavage of endoplasmic reticulum proteins in hepatocellular carcinoma: Detection of generated fragments in patient sera. Gastroenterology. 2006 Jun; 130(7):2010-22.Gastroenterology2006-06-01T00:00:002006Cleavage of endoplasmic reticulum proteins in hepatocellular carcinoma: Detection of generated fragments in patient sera.16912187Gupta A, Williams BR, Hanash SM, Rawwas JCancer researchCellular retinoic acid-binding protein II is a direct transcriptional target of MycN in neuroblastoma. Cancer Res. 2006 Aug 15; 66(16):8100-8.Cancer Res2006-08-15T00:00:002006Cellular retinoic acid-binding protein II is a direct transcriptional target of MycN in neuroblastoma.17418409Wu R, Hendrix-Lucas N, Kuick R, Zhai Y, Schwartz DR, Akyol A, Hanash S, Misek DE, Katabuchi H, Williams BO, Fearon ER, Cho KRCancer cellMouse model of human ovarian endometrioid adenocarcinoma based on somatic defects in the Wnt/beta-catenin and PI3K/Pten signaling pathways. Cancer Cell. 2007 Apr; 11(4):321-33.Cancer Cell2007-04-01T00:00:002007Mouse model of human ovarian endometrioid adenocarcinoma based on somatic defects in the Wnt/beta-catenin and PI3K/Pten signaling pathways.17696519Faca V, Pitteri SJ, Newcomb L, Glukhova V, Phanstiel D, Krasnoselsky A, Zhang Q, Struthers J, Wang H, Eng J, Fitzgibbon M, McIntosh M, Hanash SJournal of proteome researchContribution of protein fractionation to depth of analysis of the serum and plasma proteomes. J Proteome Res. 2007 Sep; 6(9):3558-65.J Proteome Res2007-08-16T00:00:002007Contribution of protein fractionation to depth of analysis of the serum and plasma proteomes.17941811Pitteri SJ, Hanash SMExpert review of proteomicsProteomic approaches for cancer biomarker discovery in plasma. Expert Rev Proteomics. 2007 Oct; 4(5):589-90.Expert Rev Proteomics2007-10-01T00:00:002007Proteomic approaches for cancer biomarker discovery in plasma.18419151Krasnoselsky AL, Faca VM, Pitteri SJ, Zhang Q, Hanash SMJournal of proteome researchIsoform analysis of LC-MS/MS data from multidimensional fractionation of the serum proteome. J Proteome Res. 2008 Jun; 7(6):2546-52.J Proteome Res2008-04-18T00:00:002008Isoform analysis of LC-MS/MS data from multidimensional fractionation of the serum proteome.18633972Kim YS, Son OL, Lee JY, Kim SH, Oh S, Lee YS, Kim CH, Yoo JS, Lee JH, Miyoshi E, Taniguchi N, Hanash SM, Yoo HS, Ko JHProteomicsLectin precipitation using phytohemagglutinin-L(4) coupled to avidin-agarose for serological biomarker discovery in colorectal cancer. Proteomics. 2008 Aug; 8(16):3229-35.Proteomics2008-08-01T00:00:002008Lectin precipitation using phytohemagglutinin-L(4) coupled to avidin-agarose for serological biomarker discovery in colorectal cancer.18794547Qiu J, Choi G, Li L, Wang H, Pitteri SJ, Pereira-Faca SR, Krasnoselsky AL, Randolph TW, Omenn GS, Edelstein C, Barnett MJ, Thornquist MD, Goodman GE, Brenner DE, Feng Z, Hanash SMJournal of clinical oncology : official journal of the American Society of Clinical OncologyOccurrence of autoantibodies to annexin I, 14-3-3 theta and LAMR1 in prediagnostic lung cancer sera. J Clin Oncol. 2008 Nov 01; 26(31):5060-6.J Clin Oncol2008-09-15T00:00:002008Occurrence of autoantibodies to annexin I, 14-3-3 theta and LAMR1 in prediagnostic lung cancer sera.18832652Paczesny S, Krijanovski OI, Braun TM, Choi SW, Clouthier SG, Kuick R, Misek DE, Cooke KR, Kitko CL, Weyand A, Bickley D, Jones D, Whitfield J, Reddy P, Levine JE, Hanash SM, Ferrara JLBloodA biomarker panel for acute graft-versus-host disease. Blood. 2009 Jan 08; 113(2):273-8.Blood2008-10-02T00:00:002008A biomarker panel for acute graft-versus-host disease.18984577Fang Q, Strand A, Law W, Faca VM, Fitzgibbon MP, Hamel N, Houle B, Liu X, May DH, Poschmann G, Roy L, St?hler K, Ying W, Zhang J, Zheng Z, Bergeron JJ, Hanash S, He F, Leavitt BR, Meyer HE, Qian X, McIntosh MWMolecular & cellular proteomics : MCPBrain-specific proteins decline in the cerebrospinal fluid of humans with Huntington disease. Mol Cell Proteomics. 2009 Mar; 8(3):451-66.Mol Cell Proteomics2008-11-04T00:00:002008Brain-specific proteins decline in the cerebrospinal fluid of humans with Huntington disease.19240248Hung KE, Faca V, Song K, Sarracino DA, Richard LG, Krastins B, Forrester S, Porter A, Kunin A, Mahmood U, Haab BB, Hanash SM, Kucherlapati RCancer prevention research (Philadelphia, Pa.)Comprehensive proteome analysis of an Apc mouse model uncovers proteins associated with intestinal tumorigenesis. Cancer Prev Res (Phila). 2009 Mar; 2(3):224-33.Cancer Prev Res (Phila)2009-02-24T00:00:002009Comprehensive proteome analysis of an Apc mouse model uncovers proteins associated with intestinal tumorigenesis.19505085Garcia J, Faca V, Jarzembowski J, Zhang Q, Park J, Hanash SJournal of proteome researchComprehensive profiling of the cell surface proteome of Sy5Y neuroblastoma cells yields a subset of proteins associated with tumor differentiation. J Proteome Res. 2009 Aug; 8(8):3791-6.J Proteome Res2009-08-01T00:00:002009Comprehensive profiling of the cell surface proteome of Sy5Y neuroblastoma cells yields a subset of proteins associated with tumor differentiation.19936259Pitteri SJ, JeBailey L, Fa?a VM, Thorpe JD, Silva MA, Ireton RC, Horton MB, Wang H, Pruitt LC, Zhang Q, Cheng KH, Urban N, Hanash SM, Dinulescu DMPloS oneIntegrated proteomic analysis of human cancer cells and plasma from tumor bearing mice for ovarian cancer biomarker discovery. PLoS One. 2009 Nov 19; 4(11):e7916.PLoS One2009-11-19T00:00:002009Integrated proteomic analysis of human cancer cells and plasma from tumor bearing mice for ovarian cancer biomarker discovery.20667078Prentice RL, Paczesny S, Aragaki A, Amon LM, Chen L, Pitteri SJ, McIntosh M, Wang P, Buson Busald T, Hsia J, Jackson RD, Rossouw JE, Manson JE, Johnson K, Eaton C, Hanash SMGenome medicineNovel proteins associated with risk for coronary heart disease or stroke among postmenopausal women identified by in-depth plasma proteome profiling. Genome Med. 2010 Jul 28; 2(7):48.Genome Med2010-07-28T00:00:002010Novel proteins associated with risk for coronary heart disease or stroke among postmenopausal women identified by in-depth plasma proteome profiling.20733593Hanash S, Taguchi ANature reviews. CancerThe grand challenge to decipher the cancer proteome. Nat Rev Cancer. 2010 09; 10(9):652-60.Nat Rev Cancer2010-09-01T00:00:002010The grand challenge to decipher the cancer proteome.21037107Pitteri SJ, Hanash SMCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive OncologyConfounding effects of hormone replacement therapy in protein biomarker studies. Cancer Epidemiol Biomarkers Prev. 2011 Jan; 20(1):134-9.Cancer Epidemiol Biomarkers Prev2010-10-29T00:00:002010Confounding effects of hormone replacement therapy in protein biomarker studies.22398612Paik YK, Jeong SK, Omenn GS, Uhlen M, Hanash S, Cho SY, Lee HJ, Na K, Choi EY, Yan F, Zhang F, Zhang Y, Snyder M, Cheng Y, Chen R, Marko-Varga G, Deutsch EW, Kim H, Kwon JY, Aebersold R, Bairoch A, Taylor AD, Kim KY, Lee EY, Hochstrasser D, Legrain P, Hancock WSNature biotechnologyThe Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome. Nat Biotechnol. 2012 Mar 07; 30(3):221-3.Nat Biotechnol2012-03-07T00:00:002012The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome.22411897Kani K, Faca VM, Hughes LD, Zhang W, Fang Q, Shahbaba B, Luethy R, Erde J, Schmidt J, Pitteri SJ, Zhang Q, Katz JE, Gross ME, Plevritis SK, McIntosh MW, Jain A, Hanash S, Agus DB, Mallick PMolecular cancer therapeuticsQuantitative proteomic profiling identifies protein correlates to EGFR kinase inhibition. Mol Cancer Ther. 2012 May; 11(5):1071-81.Mol Cancer Ther2012-03-12T00:00:002012Quantitative proteomic profiling identifies protein correlates to EGFR kinase inhibition.22443261Paik YK, Omenn GS, Uhlen M, Hanash S, Marko-Varga G, Aebersold R, Bairoch A, Yamamoto T, Legrain P, Lee HJ, Na K, Jeong SK, He F, Binz PA, Nishimura T, Keown P, Baker MS, Yoo JS, Garin J, Archakov A, Bergeron J, Salekdeh GH, Hancock WSJournal of proteome researchStandard guidelines for the chromosome-centric human proteome project. J Proteome Res. 2012 Apr 06; 11(4):2005-13.J Proteome Res2012-03-26T00:00:002012Standard guidelines for the chromosome-centric human proteome project.23269276Ladd JJ, Chao T, Johnson MM, Qiu J, Chin A, Israel R, Pitteri SJ, Mao J, Wu M, Amon LM, McIntosh M, Li C, Prentice R, Disis N, Hanash SCancer researchAutoantibody signatures involving glycolysis and splicesome proteins precede a diagnosis of breast cancer among postmenopausal women. Cancer Res. 2013 Mar 01; 73(5):1502-13.Cancer Res2012-12-26T00:00:002012Autoantibody signatures involving glycolysis and splicesome proteins precede a diagnosis of breast cancer among postmenopausal women.BiostatisticsClinical Cancer PreventionGeneral Internal MedicineGI Medical OncologySystems BiologyThoracic Head & Neck Medical OncologyTranslational Molecular PathologyMD AndersonKIM-ANHDOKIM-ANH DO8794DO, KIM-ANHProfessorJOHN VICTORHEYMACHJOHN VICTOR HEYMACH9280HEYMACH, JOHN VICTORProfessorAYUMUTAGUCHIAYUMU TAGUCHI9877TAGUCHI, AYUMUAssistant ProfessorANIRBANMAITRAANIRBAN MAITRA9915MAITRA, ANIRBANProfessorJAFFER AAJANIJAFFER A AJANI8473AJANI, JAFFER AProfessorGORDON BMILLSGORDON B MILLS8620MILLS, GORDON BProfessorEDWIN JUSTINOSTRINEDWIN JUSTIN OSTRIN9914OSTRIN, EDWIN JUSTINAssistant Professor9.893340.002344281338research areas7.974060.0213378188coauthor of227.2752.506260similar to11550selected publicationsIGNACIO IVANWISTUBAIGNACIO IVAN WISTUBA9098WISTUBA, IGNACIO IVANProfessorZIDINGFENGZIDING FENG9893FENG, ZIDINGProfessorAuthorship 2122274Authorship 2128423Authorship 2128561Authorship 2130531Authorship 2131633Authorship 2132321Authorship 2132403Authorship 2132491Authorship 2132574Authorship 2136425Authorship 2138231Authorship 2142713Authorship 2142732Authorship 2143963Authorship 2148793Authorship 2149116Authorship 2160085Authorship 2160736Authorship 2162137Authorship 2167504Authorship 21702210Authorship 2170737Authorship 2172361Authorship 2173048Authorship 21731315Authorship 2175715Authorship 2176105Authorship 2176194Authorship 2176281Authorship 2177257Authorship 2184819Authorship 2185006Authorship 2185911Authorship 2188308Authorship 2195573Authorship 21957612Authorship 22018610Authorship 2202415Authorship 22038812Authorship 22039217Authorship 2204079Authorship 2204315Authorship 2206801Authorship 22085810Authorship 22091316Authorship 2211966Authorship 2212359Authorship 2213816Authorship 22153710Authorship 22161210Authorship 22231011Authorship 22302511Authorship 2240088Authorship 2240545Authorship 2242504Authorship 2247458Authorship 2259423Authorship 2259444Authorship 2262593Authorship 2264842Authorship 2268898Authorship 2268986Authorship 2269172Authorship 227118Authorship 2272462Authorship 22747310Authorship 2275325Authorship 22788628Authorship 2288773Authorship 22993111Authorship 2299626Authorship 23008212Authorship 23092116Authorship 2317169Authorship 2320398Authorship 2328508Authorship 23310213Authorship 2342343Authorship 2345552Authorship 2354305Authorship 2355149662911Rucknagel DL, Baine RM, Hanash SM, Winter WPProgress in clinical and biological researchPolymorphism in the number of hemoglobin alpha-chain loci and mechanisms governing the balance of chain synthesis. Prog Clin Biol Res. 1978; 21:63-78.Prog Clin Biol Res1978-01-01T00:00:001978Polymorphism in the number of hemoglobin alpha-chain loci and mechanisms governing the balance of chain synthesis.1376116Strahler JR, Lamb BJ, Ungar DR, Fox DA, Hanash SMBiochemical and biophysical research communicationsCell cycle progression is associated with distinct patterns of phosphorylation of Op18. Biochem Biophys Res Commun. 1992 May 29; 185(1):197-203.Biochem Biophys Res Commun1992-05-29T00:00:001992Cell cycle progression is associated with distinct patterns of phosphorylation of Op18.1376122Richardson BC, Strahler JR, Pivirotto TS, Quddus J, Bayliss GE, Gross LA, O'Rourke KS, Powers D, Hanash SM, Johnson MAArthritis and rheumatismPhenotypic and functional similarities between 5-azacytidine-treated T cells and a T cell subset in patients with active systemic lupus erythematosus. Arthritis Rheum. 1992 Jun; 35(6):647-62.Arthritis Rheum1992-06-01T00:00:001992Phenotypic and functional similarities between 5-azacytidine-treated T cells and a T cell subset in patients with active systemic lupus erythematosus.1975505Keim D, Hailat N, Hodge D, Hanash SMBloodProliferating cell nuclear antigen expression in childhood acute leukemia. Blood. 1990 Sep 01; 76(5):985-90.Blood1990-09-01T00:00:001990Proliferating cell nuclear antigen expression in childhood acute leukemia.3258330Cornacchia E, Golbus J, Maybaum J, Strahler J, Hanash S, Richardson BJournal of immunology (Baltimore, Md. : 1950)Hydralazine and procainamide inhibit T cell DNA methylation and induce autoreactivity. J Immunol. 1988 Apr 01; 140(7):2197-200.J Immunol1988-04-01T00:00:001988Hydralazine and procainamide inhibit T cell DNA methylation and induce autoreactivity.3443294Schneider J, Erickson RP, Hanash SGenetical researchMouse testicular protein variants, including tubulin, detected by isoelectrofocusing two-dimensional gel electrophoresis. Genet Res. 1987 Dec; 50(3):225-33.Genet Res1987-12-01T00:00:001987Mouse testicular protein variants, including tubulin, detected by isoelectrofocusing two-dimensional gel electrophoresis.3456254Hanash SM, Baier LJCancerTwo-dimensional gel electrophoresis of cellular proteins reveals myeloid origin of blasts in two children with otherwise undifferentiated leukemia. Cancer. 1986 Apr 15; 57(8):1539-43.Cancer1986-04-15T00:00:001986Two-dimensional gel electrophoresis of cellular proteins reveals myeloid origin of blasts in two children with otherwise undifferentiated leukemia.3484825Hanash SM, Baier LJ, McCurry L, Schwartz SAProceedings of the National Academy of Sciences of the United States of AmericaLineage-related polypeptide markers in acute lymphoblastic leukemia detected by two-dimensional gel electrophoresis. Proc Natl Acad Sci U S A. 1986 Feb; 83(3):807-11.Proc Natl Acad Sci U S A1986-02-01T00:00:001986Lineage-related polypeptide markers in acute lymphoblastic leukemia detected by two-dimensional gel electrophoresis.3675594Strahler JR, Rosenblum BB, Hanash SMBiochemical and biophysical research communicationsIdentification and characterization of a human transthyretin variant. Biochem Biophys Res Commun. 1987 Oct 14; 148(1):471-7.Biochem Biophys Res Commun1987-10-14T00:00:001987Identification and characterization of a human transthyretin variant.3766538Hanash SM, Baier LJ, Welch D, Kuick R, Galteau MAmerican journal of human geneticsGenetic variants detected among 106 lymphocyte polypeptides observed in two-dimensional gels. Am J Hum Genet. 1986 Sep; 39(3):317-28.Am J Hum Genet1986-09-01T00:00:001986Genetic variants detected among 106 lymphocyte polypeptides observed in two-dimensional gels.3953575Hanash SM, Neel JV, Baier LJ, Rosenblum BB, Niezgoda W, Markel DAmerican journal of human geneticsGenetic analysis of thirty-three platelet polypeptides detected in two-dimensional polyacrylamide gels. Am J Hum Genet. 1986 Mar; 38(3):352-60.Am J Hum Genet1986-03-01T00:00:001986Genetic analysis of thirty-three platelet polypeptides detected in two-dimensional polyacrylamide gels.4056362Neel JV, Baier L, Hanash S, Erickson RPThe Journal of heredityFrequency of polymorphisms for alleles encoding for liver proteins of domesticated mice. J Hered. 1985 Sep-Oct; 76(5):314-20.J Hered1985-09-01T00:00:001985Frequency of polymorphisms for alleles encoding for liver proteins of domesticated mice.6169089Rucknagel DL, LaDu CS, Reynolds FJ, Hanash SM, Surtshin S, Whitten CWProgress in clinical and biological researchImmunologic quantification of fetal hemoglobin in sickle cell anemia. Prog Clin Biol Res. 1981; 60:135-47.Prog Clin Biol Res1981-01-01T00:00:001981Immunologic quantification of fetal hemoglobin in sickle cell anemia.6630354Strahler JR, Rosenblum BB, Hanash S, Butkunas RJournal of chromatographySeparation of transferrin types in human plasma by anion-exchange high-performance liquid chromatography. J Chromatogr. 1983 Aug 26; 266:281-91.J Chromatogr1983-08-26T00:00:001983Separation of transferrin types in human plasma by anion-exchange high-performance liquid chromatography.6660481Gupta SP, Hanash SMAnalytical biochemistrySeparation of hemoglobin types by cation-exchange high-performance liquid chromatography. Anal Biochem. 1983 Oct 01; 134(1):117-21.Anal Biochem1983-10-01T00:00:001983Separation of hemoglobin types by cation-exchange high-performance liquid chromatography.6879181Strahler JR, Rosenbloom BB, Hanash SMScience (New York, N.Y.)A silent, neutral substitution detected by reverse-phase high-performance liquid chromatography: hemoglobin Beirut. Science. 1983 Aug 26; 221(4613):860-2.Science1983-08-26T00:00:001983A silent, neutral substitution detected by reverse-phase high-performance liquid chromatography: hemoglobin Beirut.7216816Hanash SM, Shapiro DNHemoglobinSeparation of human hemoglobins by ion exchange high performance liquid chromatography. Hemoglobin. 1981; 5(2):165-75.Hemoglobin1981-01-01T00:00:001981Separation of human hemoglobins by ion exchange high performance liquid chromatography.7774565Asakawa J, Kuick R, Neel JV, Kodaira M, Satoh C, Hanash SMElectrophoresisQuantitative and qualitative genetic variation in two-dimensional DNA gels of human lymphocytoid cell lines. Electrophoresis. 1995 Feb; 16(2):241-52.Electrophoresis1995-02-01T00:00:001995Quantitative and qualitative genetic variation in two-dimensional DNA gels of human lymphocytoid cell lines.7890374Vila LM, Haftel HM, Park HS, Lin MS, Romzek NC, Hanash SM, Holoshitz JInfection and immunityExpansion of mycobacterium-reactive gamma delta T cells by a subset of memory helper T cells. Infect Immun. 1995 Apr; 63(4):1211-7.Infect Immun1995-04-01T00:00:001995Expansion of mycobacterium-reactive gamma delta T cells by a subset of memory helper T cells.8314790Wang YK, Liao PC, Allison J, Gage DA, Andrews PC, Lubman DM, Hanash SM, Strahler JRThe Journal of biological chemistryPhorbol 12-myristate 13-acetate-induced phosphorylation of Op18 in Jurkat T cells. Identification of phosphorylation sites by matrix-assisted laser desorption ionization mass spectrometry. J Biol Chem. 1993 Jul 05; 268(19):14269-77.J Biol Chem1993-07-05T00:00:001993Phorbol 12-myristate 13-acetate-induced phosphorylation of Op18 in Jurkat T cells. Identification of phosphorylation sites by matrix-assisted laser desorption ionization mass spectrometry.8975712Tsukiyama-Kohara K, Vidal SM, Gingras AC, Glover TW, Hanash SM, Heng H, Sonenberg NGenomicsTissue distribution, genomic structure, and chromosome mapping of mouse and human eukaryotic initiation factor 4E-binding proteins 1 and 2. Genomics. 1996 Dec 15; 38(3):353-63.Genomics1996-12-15T00:00:001996Tissue distribution, genomic structure, and chromosome mapping of mouse and human eukaryotic initiation factor 4E-binding proteins 1 and 2.9193221Bradford CR, Zhu S, Poore J, Fisher SG, Beals TF, Thoraval D, Hanash SM, Carey TE, Wolf GTArchives of otolaryngology--head & neck surgeryp53 mutation as a prognostic marker in advanced laryngeal carcinoma. Department of Veterans Affairs Laryngeal Cancer Cooperative Study Group. Arch Otolaryngol Head Neck Surg. 1997 Jun; 123(6):605-9.Arch Otolaryngol Head Neck Surg1997-06-01T00:00:001997p53 mutation as a prognostic marker in advanced laryngeal carcinoma. Department of Veterans Affairs Laryngeal Cancer Cooperative Study Group.9233626Yang J, Deng C, Hemati N, Hanash SM, Richardson BCJournal of immunology (Baltimore, Md. : 1950)Effect of mitogenic stimulation and DNA methylation on human T cell DNA methyltransferase expression and activity. J Immunol. 1997 Aug 01; 159(3):1303-9.J Immunol1997-08-01T00:00:001997Effect of mitogenic stimulation and DNA methylation on human T cell DNA methyltransferase expression and activity.9310825Diaz LA, Friedman AW, He X, Kuick RD, Hanash SM, Fox DAInternational immunologyMonocyte-dependent regulation of T lymphocyte activation through CD98. Int Immunol. 1997 Sep; 9(9):1221-31.Int Immunol1997-09-01T00:00:001997Monocyte-dependent regulation of T lymphocyte activation through CD98.9324290Melhem R, Hailat N, Kuick R, Hanash SMLeukemiaQuantitative analysis of Op18 phosphorylation in childhood acute leukemia. Leukemia. 1997 Oct; 11(10):1690-5.Leukemia1997-10-01T00:00:001997Quantitative analysis of Op18 phosphorylation in childhood acute leukemia.9662332Almeida A, Zhu XX, Vogt N, Tyagi R, Muleris M, Dutrillaux AM, Dutrillaux B, Ross D, Malfoy B, Hanash SOncogeneGAC1, a new member of the leucine-rich repeat superfamily on chromosome band 1q32.1, is amplified and overexpressed in malignant gliomas. Oncogene. 1998 Jun 11; 16(23):2997-3002.Oncogene1998-06-11T00:00:001998GAC1, a new member of the leucine-rich repeat superfamily on chromosome band 1q32.1, is amplified and overexpressed in malignant gliomas.9740061Hanash SM, Teichroew DElectrophoresisMining the human proteome: experience with the human lymphoid protein database. Electrophoresis. 1998 Aug; 19(11):2004-9.Electrophoresis1998-08-01T00:00:001998Mining the human proteome: experience with the human lymphoid protein database.10487937Chen Y, Jin X, Misek D, Hinderer R, Hanash SM, Lubman DMRapid communications in mass spectrometry : RCMIdentification of proteins from two-dimensional gel electrophoresis of human erythroleukemia cells using capillary high performance liquid chromatography/electrospray-ion trap-reflectron time-of-flight mass spectrometry with two-dimensional topographic map analysis of in-gel tryptic digest products. Rapid Commun Mass Spectrom. 1999; 13(19):1907-16.Rapid Commun Mass Spectrom1999-01-01T00:00:001999Identification of proteins from two-dimensional gel electrophoresis of human erythroleukemia cells using capillary high performance liquid chromatography/electrospray-ion trap-reflectron time-of-flight mass spectrometry with two-dimensional topographic map analysis of in-gel tryptic digest products.10699183Kondo T, Bobek MP, Kuick R, Lamb B, Zhu X, Narayan A, Bourc'his D, Viegas-P?quignot E, Ehrlich M, Hanash SMHuman molecular geneticsWhole-genome methylation scan in ICF syndrome: hypomethylation of non-satellite DNA repeats D4Z4 and NBL2. Hum Mol Genet. 2000 Mar 01; 9(4):597-604.Hum Mol Genet2000-03-01T00:00:002000Whole-genome methylation scan in ICF syndrome: hypomethylation of non-satellite DNA repeats D4Z4 and NBL2.11051243Prasannan L, Misek DE, Hinderer R, Michon J, Geiger JD, Hanash SMClinical cancer research : an official journal of the American Association for Cancer ResearchIdentification of beta-tubulin isoforms as tumor antigens in neuroblastoma. Clin Cancer Res. 2000 Oct; 6(10):3949-56.Clin Cancer Res2000-10-01T00:00:002000Identification of beta-tubulin isoforms as tumor antigens in neuroblastoma.11229472Deng C, Kaplan MJ, Yang J, Ray D, Zhang Z, McCune WJ, Hanash SM, Richardson BCArthritis and rheumatismDecreased Ras-mitogen-activated protein kinase signaling may cause DNA hypomethylation in T lymphocytes from lupus patients. Arthritis Rheum. 2001 Feb; 44(2):397-407.Arthritis Rheum2001-02-01T00:00:002001Decreased Ras-mitogen-activated protein kinase signaling may cause DNA hypomethylation in T lymphocytes from lupus patients.11559565Rickman DS, Bobek MP, Misek DE, Kuick R, Blaivas M, Kurnit DM, Taylor J, Hanash SMCancer researchDistinctive molecular profiles of high-grade and low-grade gliomas based on oligonucleotide microarray analysis. Cancer Res. 2001 Sep 15; 61(18):6885-91.Cancer Res2001-09-15T00:00:002001Distinctive molecular profiles of high-grade and low-grade gliomas based on oligonucleotide microarray analysis.11721644Waghray A, Feroze F, Schober MS, Yao F, Wood C, Puravs E, Krause M, Hanash S, Chen YQProteomicsIdentification of androgen-regulated genes in the prostate cancer cell line LNCaP by serial analysis of gene expression and proteomic analysis. Proteomics. 2001 Oct; 1(10):1327-38.Proteomics2001-10-01T00:00:002001Identification of androgen-regulated genes in the prostate cancer cell line LNCaP by serial analysis of gene expression and proteomic analysis.11741835Ehrlich M, Buchanan KL, Tsien F, Jiang G, Sun B, Uicker W, Weemaes CM, Smeets D, Sperling K, Belohradsky BH, Tommerup N, Misek DE, Rouillard JM, Kuick R, Hanash SMHuman molecular geneticsDNA methyltransferase 3B mutations linked to the ICF syndrome cause dysregulation of lymphogenesis genes. Hum Mol Genet. 2001 Dec 01; 10(25):2917-31.Hum Mol Genet2001-12-01T00:00:002001DNA methyltransferase 3B mutations linked to the ICF syndrome cause dysregulation of lymphogenesis genes.11788993Hanash SM, Bobek MP, Rickman DS, Williams T, Rouillard JM, Kuick R, Puravs EProteomicsIntegrating cancer genomics and proteomics in the post-genome era. Proteomics. 2002 Jan; 2(1):69-75.Proteomics2002-01-01T00:00:002002Integrating cancer genomics and proteomics in the post-genome era.11804268Hanash SMCurrent opinion in molecular therapeuticsGlobal profiling of gene expression in cancer using genomics and proteomics. Curr Opin Mol Ther. 2001 Dec; 3(6):538-45.Curr Opin Mol Ther2001-12-01T00:00:002001Global profiling of gene expression in cancer using genomics and proteomics.12114434Chen G, Gharib TG, Huang CC, Thomas DG, Shedden KA, Taylor JM, Kardia SL, Misek DE, Giordano TJ, Iannettoni MD, Orringer MB, Hanash SM, Beer DGClinical cancer research : an official journal of the American Association for Cancer ResearchProteomic analysis of lung adenocarcinoma: identification of a highly expressed set of proteins in tumors. Clin Cancer Res. 2002 Jul; 8(7):2298-305.Clin Cancer Res2002-07-01T00:00:002002Proteomic analysis of lung adenocarcinoma: identification of a highly expressed set of proteins in tumors.12118244Beer DG, Kardia SL, Huang CC, Giordano TJ, Levin AM, Misek DE, Lin L, Chen G, Gharib TG, Thomas DG, Lizyness ML, Kuick R, Hayasaka S, Taylor JM, Iannettoni MD, Orringer MB, Hanash SNature medicineGene-expression profiles predict survival of patients with lung adenocarcinoma. Nat Med. 2002 Aug; 8(8):816-24.Nat Med2002-07-15T00:00:002002Gene-expression profiles predict survival of patients with lung adenocarcinoma.12138207Ross SE, Erickson RL, Gerin I, DeRose PM, Bajnok L, Longo KA, Misek DE, Kuick R, Hanash SM, Atkins KB, Andresen SM, Nebb HI, Madsen L, Kristiansen K, MacDougald OAMolecular and cellular biologyMicroarray analyses during adipogenesis: understanding the effects of Wnt signaling on adipogenesis and the roles of liver X receptor alpha in adipocyte metabolism. Mol Cell Biol. 2002 Aug; 22(16):5989-99.Mol Cell Biol2002-08-01T00:00:002002Microarray analyses during adipogenesis: understanding the effects of Wnt signaling on adipogenesis and the roles of liver X receptor alpha in adipocyte metabolism.12538157Richards J, Le Naour F, Hanash S, Beretta LAnnals of the New York Academy of SciencesIntegrated genomic and proteomic analysis of signaling pathways in dendritic cell differentiation and maturation. Ann N Y Acad Sci. 2002 Dec; 975:91-100.Ann N Y Acad Sci2002-12-01T00:00:002002Integrated genomic and proteomic analysis of signaling pathways in dendritic cell differentiation and maturation.12546963Hanash SDrug discovery todaySamir Hanash discusses how HUPO aims to globalize proteomics research (interview by Joanna Owens). Drug Discov Today. 2002 Aug 01; 7(15):797-801.Drug Discov Today2002-08-01T00:00:002002Samir Hanash discusses how HUPO aims to globalize proteomics research (interview by Joanna Owens).12547710Giordano TJ, Thomas DG, Kuick R, Lizyness M, Misek DE, Smith AL, Sanders D, Aljundi RT, Gauger PG, Thompson NW, Taylor JM, Hanash SMThe American journal of pathologyDistinct transcriptional profiles of adrenocortical tumors uncovered by DNA microarray analysis. Am J Pathol. 2003 Feb; 162(2):521-31.Am J Pathol2003-02-01T00:00:002003Distinct transcriptional profiles of adrenocortical tumors uncovered by DNA microarray analysis.12663442Ichiba T, Teshima T, Kuick R, Misek DE, Liu C, Takada Y, Maeda Y, Reddy P, Williams DL, Hanash SM, Ferrara JLBloodEarly changes in gene expression profiles of hepatic GVHD uncovered by oligonucleotide microarrays. Blood. 2003 Jul 15; 102(2):763-71.Blood2003-03-27T00:00:002003Early changes in gene expression profiles of hepatic GVHD uncovered by oligonucleotide microarrays.12709512Ji B, Chen XQ, Misek DE, Kuick R, Hanash S, Ernst S, Najarian R, Logsdon CDPhysiological genomicsPancreatic gene expression during the initiation of acute pancreatitis: identification of EGR-1 as a key regulator. Physiol Genomics. 2003 Jun 24; 14(1):59-72.Physiol Genomics2003-06-24T00:00:002003Pancreatic gene expression during the initiation of acute pancreatitis: identification of EGR-1 as a key regulator.12734359Lu Q, Wu A, Ray D, Deng C, Attwood J, Hanash S, Pipkin M, Lichtenheld M, Richardson BJournal of immunology (Baltimore, Md. : 1950)DNA methylation and chromatin structure regulate T cell perforin gene expression. J Immunol. 2003 May 15; 170(10):5124-32.J Immunol2003-05-15T00:00:002003DNA methylation and chromatin structure regulate T cell perforin gene expression.14578198Shedden KA, Taylor JM, Giordano TJ, Kuick R, Misek DE, Rennert G, Schwartz DR, Gruber SB, Logsdon C, Simeone D, Kardia SL, Greenson JK, Cho KR, Beer DG, Fearon ER, Hanash SThe American journal of pathologyAccurate molecular classification of human cancers based on gene expression using a simple classifier with a pathological tree-based framework. Am J Pathol. 2003 Nov; 163(5):1985-95.Am J Pathol2003-11-01T00:00:002003Accurate molecular classification of human cancers based on gene expression using a simple classifier with a pathological tree-based framework.14595809Nam MJ, Madoz-Gurpide J, Wang H, Lescure P, Schmalbach CE, Zhao R, Misek DE, Kuick R, Brenner DE, Hanash SMProteomicsMolecular profiling of the immune response in colon cancer using protein microarrays: occurrence of autoantibodies to ubiquitin C-terminal hydrolase L3. Proteomics. 2003 Nov; 3(11):2108-15.Proteomics2003-11-01T00:00:002003Molecular profiling of the immune response in colon cancer using protein microarrays: occurrence of autoantibodies to ubiquitin C-terminal hydrolase L3.14695992Zatkova A, Rouillard JM, Hartmann W, Lamb BJ, Kuick R, Eckart M, von Schweinitz D, Koch A, Fonatsch C, Pietsch T, Hanash SM, Wimmer KGenes, chromosomes & cancerAmplification and overexpression of the IGF2 regulator PLAG1 in hepatoblastoma. Genes Chromosomes Cancer. 2004 Feb; 39(2):126-37.Genes Chromosomes Cancer2004-02-01T00:00:002004Amplification and overexpression of the IGF2 regulator PLAG1 in hepatoblastoma.14978788Zatkova A, Ullmann R, Rouillard JM, Lamb BJ, Kuick R, Hanash SM, Schnittger S, Schoch C, Fonatsch C, Wimmer KGenes, chromosomes & cancerDistinct sequences on 11q13.5 and 11q23-24 are frequently coamplified with MLL in complexly organized 11q amplicons in AML/MDS patients. Genes Chromosomes Cancer. 2004 Apr; 39(4):263-76.Genes Chromosomes Cancer2004-04-01T00:00:002004Distinct sequences on 11q13.5 and 11q23-24 are frequently coamplified with MLL in complexly organized 11q amplicons in AML/MDS patients.14991897Chen G, Wang H, Miller CT, Thomas DG, Gharib TG, Misek DE, Giordano TJ, Orringer MB, Hanash SM, Beer DGThe Journal of pathologyReduced selenium-binding protein 1 expression is associated with poor outcome in lung adenocarcinomas. J Pathol. 2004 Mar; 202(3):321-9.J Pathol2004-03-01T00:00:002004Reduced selenium-binding protein 1 expression is associated with poor outcome in lung adenocarcinomas.15188362Oelke K, Lu Q, Richardson D, Wu A, Deng C, Hanash S, Richardson BArthritis and rheumatismOverexpression of CD70 and overstimulation of IgG synthesis by lupus T cells and T cells treated with DNA methylation inhibitors. Arthritis Rheum. 2004 Jun; 50(6):1850-60.Arthritis Rheum2004-06-01T00:00:002004Overexpression of CD70 and overstimulation of IgG synthesis by lupus T cells and T cells treated with DNA methylation inhibitors.15289361Hong SH, Misek DE, Wang H, Puravs E, Giordano TJ, Greenson JK, Brenner DE, Simeone DM, Logsdon CD, Hanash SMCancer researchAn autoantibody-mediated immune response to calreticulin isoforms in pancreatic cancer. Cancer Res. 2004 Aug 01; 64(15):5504-10.Cancer Res2004-08-01T00:00:002004An autoantibody-mediated immune response to calreticulin isoforms in pancreatic cancer.15705192Shedden K, Chen W, Kuick R, Ghosh D, Macdonald J, Cho KR, Giordano TJ, Gruber SB, Fearon ER, Taylor JM, Hanash SBMC bioinformaticsComparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data. BMC Bioinformatics. 2005 Feb 10; 6:26.BMC Bioinformatics2005-02-10T00:00:002005Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data.15825077Hinoi T, Gesina G, Akyol A, Kuick R, Hanash S, Giordano TJ, Gruber SB, Fearon ERGastroenterologyCDX2-regulated expression of iron transport protein hephaestin in intestinal and colonic epithelium. Gastroenterology. 2005 Apr; 128(4):946-61.Gastroenterology2005-04-01T00:00:002005CDX2-regulated expression of iron transport protein hephaestin in intestinal and colonic epithelium.16462743Murdoch S, Djuric U, Mazhar B, Seoud M, Khan R, Kuick R, Bagga R, Kircheisen R, Ao A, Ratti B, Hanash S, Rouleau GA, Slim RNature geneticsMutations in NALP7 cause recurrent hydatidiform moles and reproductive wastage in humans. Nat Genet. 2006 Mar; 38(3):300-2.Nat Genet2006-02-05T00:00:002006Mutations in NALP7 cause recurrent hydatidiform moles and reproductive wastage in humans.16874523Djuric U, El-Maarri O, Lamb B, Kuick R, Seoud M, Coullin P, Oldenburg J, Hanash S, Slim RHuman geneticsFamilial molar tissues due to mutations in the inflammatory gene, NALP7, have normal postzygotic DNA methylation. Hum Genet. 2006 Oct; 120(3):390-5.Hum Genet2006-07-28T00:00:002006Familial molar tissues due to mutations in the inflammatory gene, NALP7, have normal postzygotic DNA methylation.17916591Madoz-G?rpide J, Kuick R, Wang H, Misek DE, Hanash SMMolecular & cellular proteomics : MCPIntegral protein microarrays for the identification of lung cancer antigens in sera that induce a humoral immune response. Mol Cell Proteomics. 2008 Feb; 7(2):268-81.Mol Cell Proteomics2007-10-04T00:00:002007Integral protein microarrays for the identification of lung cancer antigens in sera that induce a humoral immune response.18547137Faca VM, Song KS, Wang H, Zhang Q, Krasnoselsky AL, Newcomb LF, Plentz RR, Gurumurthy S, Redston MS, Pitteri SJ, Pereira-Faca SR, Ireton RC, Katayama H, Glukhova V, Phanstiel D, Brenner DE, Anderson MA, Misek D, Scholler N, Urban ND, Barnett MJ, Edelstein C, Goodman GE, Thornquist MD, McIntosh MW, DePinho RA, Bardeesy N, Hanash SMPLoS medicineA mouse to human search for plasma proteome changes associated with pancreatic tumor development. PLoS Med. 2008 Jun 10; 5(6):e123.PLoS Med2008-06-10T00:00:002008A mouse to human search for plasma proteome changes associated with pancreatic tumor development.18707148Luethy R, Kessner DE, Katz JE, Maclean B, Grothe R, Kani K, Fa?a V, Pitteri S, Hanash S, Agus DB, Mallick PJournal of proteome researchPrecursor-ion mass re-estimation improves peptide identification on hybrid instruments. J Proteome Res. 2008 Sep; 7(9):4031-9.J Proteome Res2008-08-16T00:00:002008Precursor-ion mass re-estimation improves peptide identification on hybrid instruments.18945643Liu Y, Kuick R, Hanash S, Richardson BClinical immunology (Orlando, Fla.)DNA methylation inhibition increases T cell KIR expression through effects on both promoter methylation and transcription factors. Clin Immunol. 2009 Feb; 130(2):213-24.Clin Immunol2008-10-22T00:00:002008DNA methylation inhibition increases T cell KIR expression through effects on both promoter methylation and transcription factors.18948385McIntosh M, Anderson G, Drescher C, Hanash S, Urban N, Brown P, Gambhir SS, Coukos G, Laird PW, Nelson B, Palmer CClinical cancer research : an official journal of the American Association for Cancer ResearchOvarian cancer early detection claims are biased. Clin Cancer Res. 2008 Nov 15; 14(22):7574; author reply 7577-9.Clin Cancer Res2008-10-23T00:00:002008Ovarian cancer early detection claims are biased.19157844Vaisocherov? H, Faca VM, Taylor AD, Hanash S, Jiang SBiosensors & bioelectronicsComparative study of SPR and ELISA methods based on analysis of CD166/ALCAM levels in cancer and control human sera. Biosens Bioelectron. 2009 Mar 15; 24(7):2143-8.Biosens Bioelectron2008-11-27T00:00:002008Comparative study of SPR and ELISA methods based on analysis of CD166/ALCAM levels in cancer and control human sera.19351759Vilar E, Mukherjee B, Kuick R, Raskin L, Misek DE, Taylor JM, Giordano TJ, Hanash SM, Fearon ER, Rennert G, Gruber SBClinical cancer research : an official journal of the American Association for Cancer ResearchGene expression patterns in mismatch repair-deficient colorectal cancers highlight the potential therapeutic role of inhibitors of the phosphatidylinositol 3-kinase-AKT-mammalian target of rapamycin pathway. Clin Cancer Res. 2009 Apr 15; 15(8):2829-39.Clin Cancer Res2009-04-07T00:00:002009Gene expression patterns in mismatch repair-deficient colorectal cancers highlight the potential therapeutic role of inhibitors of the phosphatidylinositol 3-kinase-AKT-mammalian target of rapamycin pathway.19367719May D, Liu Y, Law W, Fitzgibbon M, Wang H, Hanash S, McIntosh MJournal of proteome researchPeptide sequence confidence in accurate mass and time analysis and its use in complex proteomics experiments. J Proteome Res. 2008 Dec; 7(12):5148-56.J Proteome Res2008-12-01T00:00:002008Peptide sequence confidence in accurate mass and time analysis and its use in complex proteomics experiments.19389549Qiu J, Hanash SClinics in laboratory medicineAutoantibody profiling for cancer detection. Clin Lab Med. 2009 Mar; 29(1):31-46.Clin Lab Med2009-03-01T00:00:002009Autoantibody profiling for cancer detection.19443560Diamandis EP, Hanash S, Lopez M, Carr S, Petricoin EFClinical chemistryProtein quantification by mass spectrometry: is it ready for prime time? Clin Chem. 2009 Jul; 55(7):1427-30.Clin Chem2009-05-14T00:00:002009Protein quantification by mass spectrometry: is it ready for prime time?19448641Bell AW, Deutsch EW, Au CE, Kearney RE, Beavis R, Sechi S, Nilsson T, Bergeron JJ, HUPO Test Sample Working GroupNature methodsA HUPO test sample study reveals common problems in mass spectrometry-based proteomics. Nat Methods. 2009 Jun; 6(6):423-30.Nat Methods2009-06-01T00:00:002009A HUPO test sample study reveals common problems in mass spectrometry-based proteomics.19519948Taylor AD, Hancock WS, Hincapie M, Taniguchi N, Hanash SMGenome medicineTowards an integrated proteomic and glycomic approach to finding cancer biomarkers. Genome Med. 2009 Jun 04; 1(6):57.Genome Med2009-06-04T00:00:002009Towards an integrated proteomic and glycomic approach to finding cancer biomarkers.19544026Wang H, Hanash SMethods in molecular biology (Clifton, N.J.)Electrospray mass spectrometry for quantitative plasma proteome analysis. Methods Mol Biol. 2009; 564:227-42.Methods Mol Biol2009-01-01T00:00:002009Electrospray mass spectrometry for quantitative plasma proteome analysis.19639590Jeong SK, Kwon MS, Lee EY, Lee HJ, Cho SY, Kim H, Yoo JS, Omenn GS, Aebersold R, Hanash S, Paik YKProteomicsBiomarkerDigger: a versatile disease proteome database and analysis platform for the identification of plasma cancer biomarkers. Proteomics. 2009 Jul; 9(14):3729-40.Proteomics2009-07-01T00:00:002009BiomarkerDigger: a versatile disease proteome database and analysis platform for the identification of plasma cancer biomarkers.21062094Zhang Q, Faca V, Hanash SJournal of proteome researchMining the plasma proteome for disease applications across seven logs of protein abundance. J Proteome Res. 2011 Jan 07; 10(1):46-50.J Proteome Res2010-11-29T00:00:002010Mining the plasma proteome for disease applications across seven logs of protein abundance.21136701Forrester S, Qiu J, Mangold L, Partin A, Misek D, Phinney B, Whitten D, Andrews P, Diamandis E, Omenn GS, Hanash S, Haab BBProteomics. Clinical applicationsAn experimental strategy for quantitative analysis of the humoral immune response to prostate cancer antigens using natural protein microarrays. Proteomics Clin Appl. 2007 May; 1(5):494-505.Proteomics Clin Appl2007-04-19T00:00:002007An experimental strategy for quantitative analysis of the humoral immune response to prostate cancer antigens using natural protein microarrays.21372808Wang H, Wong CH, Chin A, Taguchi A, Taylor A, Hanash S, Sekiya S, Takahashi H, Murase M, Kajihara S, Iwamoto S, Tanaka KNature protocolsIntegrated mass spectrometry-based analysis of plasma glycoproteins and their glycan modifications. Nat Protoc. 2011 Mar; 6(3):253-69.Nat Protoc2011-02-10T00:00:002011Integrated mass spectrometry-based analysis of plasma glycoproteins and their glycan modifications.21653680Pitteri SJ, Kelly-Spratt KS, Gurley KE, Kennedy J, Buson TB, Chin A, Wang H, Zhang Q, Wong CH, Chodosh LA, Nelson PS, Hanash SM, Kemp CJCancer researchTumor microenvironment-derived proteins dominate the plasma proteome response during breast cancer induction and progression. Cancer Res. 2011 Aug 01; 71(15):5090-100.Cancer Res2011-06-08T00:00:002011Tumor microenvironment-derived proteins dominate the plasma proteome response during breast cancer induction and progression.21979939Ferrara JL, Harris AC, Greenson JK, Braun TM, Holler E, Teshima T, Levine JE, Choi SW, Huber E, Landfried K, Akashi K, Vander Lugt M, Reddy P, Chin A, Zhang Q, Hanash S, Paczesny SBloodRegenerating islet-derived 3-alpha is a biomarker of gastrointestinal graft-versus-host disease. Blood. 2011 Dec 15; 118(25):6702-8.Blood2011-10-06T00:00:002011Regenerating islet-derived 3-alpha is a biomarker of gastrointestinal graft-versus-host disease.22715141Lu H, Ladd J, Feng Z, Wu M, Goodell V, Pitteri SJ, Li CI, Prentice R, Hanash SM, Disis MLCancer prevention research (Philadelphia, Pa.)Evaluation of known oncoantibodies, HER2, p53, and cyclin B1, in prediagnostic breast cancer sera. Cancer Prev Res (Phila). 2012 Aug; 5(8):1036-43.Cancer Prev Res (Phila)2012-06-19T00:00:002012Evaluation of known oncoantibodies, HER2, p53, and cyclin B1, in prediagnostic breast cancer sera.22903690Li CI, Mirus JE, Zhang Y, Ramirez AB, Ladd JJ, Prentice RL, McIntosh MW, Hanash SM, Lampe PDBreast cancer research and treatmentDiscovery and preliminary confirmation of novel early detection biomarkers for triple-negative breast cancer using preclinical plasma samples from the Women's Health Initiative observational study. Breast Cancer Res Treat. 2012 Sep; 135(2):611-8.Breast Cancer Res Treat2012-08-19T00:00:002012Discovery and preliminary confirmation of novel early detection biomarkers for triple-negative breast cancer using preclinical plasma samples from the Women's Health Initiative observational study.23248318LeBeau AM, Lee M, Murphy ST, Hann BC, Warren RS, Delos Santos R, Kurhanewicz J, Hanash SM, VanBrocklin HF, Craik CSProceedings of the National Academy of Sciences of the United States of AmericaImaging a functional tumorigenic biomarker in the transformed epithelium. Proc Natl Acad Sci U S A. 2013 Jan 02; 110(1):93-8.Proc Natl Acad Sci U S A2012-12-17T00:00:002012Imaging a functional tumorigenic biomarker in the transformed epithelium.23259914Liu S, Im H, Bairoch A, Cristofanilli M, Chen R, Deutsch EW, Dalton S, Fenyo D, Fanayan S, Gates C, Gaudet P, Hincapie M, Hanash S, Kim H, Jeong SK, Lundberg E, Mias G, Menon R, Mu Z, Nice E, Paik YK, Uhlen M, Wells L, Wu SL, Yan F, Zhang F, Zhang Y, Snyder M, Omenn GS, Beavis RC, Hancock WSJournal of proteome researchA chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17. J Proteome Res. 2013 Jan 04; 12(1):45-57.J Proteome Res2012-12-21T00:00:002012A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17.23897585Taguchi A, Hanash S, Rundle A, McKeague IW, Tang D, Darakjy S, Gaziano JM, Sesso HD, Perera FCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive OncologyCirculating pro-surfactant protein B as a risk biomarker for lung cancer. Cancer Epidemiol Biomarkers Prev. 2013 Oct; 22(10):1756-61.Cancer Epidemiol Biomarkers Prev2013-07-29T00:00:002013Circulating pro-surfactant protein B as a risk biomarker for lung cancer.24348907Zhang S, Mercado-Uribe I, Hanash S, Liu JPloS oneiTRAQ-based proteomic analysis of polyploid giant cancer cells and budding progeny cells reveals several distinct pathways for ovarian cancer development. PLoS One. 2013; 8(11):e80120.PLoS One2013-11-14T00:00:002013iTRAQ-based proteomic analysis of polyploid giant cancer cells and budding progeny cells reveals several distinct pathways for ovarian cancer development.Authorship 2357546Authorship 2358595Authorship 2358713Authorship 2360055Authorship 2362985Authorship 2363825Authorship 2364371Authorship 2365471Authorship 2365782Authorship 2366301Authorship 2367043Authorship 2368598Authorship 2371422Authorship 2372173Authorship 2373254Authorship 2373638Authorship 2374149Authorship 2376792Authorship 2380191Authorship 2381047Authorship 2382541Authorship 2384002Authorship 2386103Authorship 23894511Authorship 2389546Authorship 2389884Authorship 2392033Authorship 2397289Authorship 2397464Authorship 2398846Authorship 2399351Authorship 2399615Authorship 2400476Authorship 2404667Authorship 24059310Authorship 2406235Authorship 24142210Authorship 2416461Authorship 2416595Authorship 2419705Authorship 2425387Authorship 2426042Authorship 2428807Authorship 2436046Authorship 2436511Authorship 24378712Authorship 2438105Authorship 2439051Authorship 2440238Authorship 2440954Authorship 24434710Authorship 2444392Authorship 2444882Authorship 2445283Authorship 2445808Authorship 2446554Authorship 24467310Authorship 24477010Authorship 2448433Authorship 2449589Authorship 2452247Authorship 2452633Authorship 24531314Authorship 2454132Authorship 2455886Authorship 2457725Authorship 24580110Authorship 24580610Authorship 2459791Authorship 2461334Authorship 2461741Authorship 2465567Authorship 24661640Authorship 2466973Authorship 2467354Authorship 24676511Authorship 24698814Authorship 24700315Authorship 2471995Authorship 2473628Authorship 2473705Authorship 24778411Authorship 24792212Authorship 2483046Authorship 2488392Authorship 2494629Authorship 24986119Authorship 2505452Authorship 25055118Authorship 25105615Authorship 25133114Authorship 25146747Authorship 25170419Authorship 2522738Authorship 2526311Authorship 2535881Authorship 2540333Authorship 2540664Authorship 2543066Authorship 2548742Authorship 2548812Authorship 25517614Authorship 25579411Authorship 2558221Authorship 2558501Authorship 2559141Authorship 2568537Authorship 25707612Authorship 2583571Authorship 2586601Authorship 2592082Authorship 2598661Authorship 2599249Authorship 2601342Authorship 2602783Authorship 26093213Authorship 26155210Authorship 2617561Authorship 2622941Authorship 2625218277945Hanash SM, Rucknagel DLProceedings of the National Academy of Sciences of the United States of AmericaProteolytic activity in erythrocyte precursors. Proc Natl Acad Sci U S A. 1978 Jul; 75(7):3427-31.Proc Natl Acad Sci U S A1978-07-01T00:00:001978Proteolytic activity in erythrocyte precursors.393093Winter WP, Hanash SM, Rucknagel DLAdvances in human geneticsGenetic mechanisms contributing to the expression of the human hemoglogin loci. Adv Hum Genet. 1979; 9:229-91, 361-7.Adv Hum Genet1979-01-01T00:00:001979Genetic mechanisms contributing to the expression of the human hemoglogin loci.717933Hanash SM, Rucknagel DL, Heidelberger KP, Radin NSAnnals of internal medicinePrimary amyloidosis associated with Gaucher's disease. Ann Intern Med. 1978 Nov; 89(5 Pt 1):639-41.Ann Intern Med1978-11-01T00:00:001978Primary amyloidosis associated with Gaucher's disease.1311721Keim D, Hailat N, Melhem R, Zhu XX, Lascu I, Veron M, Strahler J, Hanash SMThe Journal of clinical investigationProliferation-related expression of p19/nm23 nucleoside diphosphate kinase. J Clin Invest. 1992 Mar; 89(3):919-24.J Clin Invest1992-03-01T00:00:001992Proliferation-related expression of p19/nm23 nucleoside diphosphate kinase.1752246G?rg A, Postel W, Friedrich C, Kuick R, Strahler JR, Hanash SMElectrophoresisTemperature-dependent spot positional variability in two-dimensional polypeptide patterns. Electrophoresis. 1991 Sep; 12(9):653-8.Electrophoresis1991-09-01T00:00:001991Temperature-dependent spot positional variability in two-dimensional polypeptide patterns.1802691Kuick RD, Skolnick MM, Hanash SM, Neel JVElectrophoresisA two-dimensional electrophoresis-related laboratory information processing system: spot matching. Electrophoresis. 1991 Oct; 12(10):736-46.Electrophoresis1991-10-01T00:00:001991A two-dimensional electrophoresis-related laboratory information processing system: spot matching.1802692Ali I, Chan Y, Kuick R, Teichroew D, Hanash SMElectrophoresisImplementation of a two-dimensional electrophoresis-related laboratory information processing system: database aspects. Electrophoresis. 1991 Oct; 12(10):747-61.Electrophoresis1991-10-01T00:00:001991Implementation of a two-dimensional electrophoresis-related laboratory information processing system: database aspects.1917919Melhem RF, Zhu XX, Hailat N, Strahler JR, Hanash SMThe Journal of biological chemistryCharacterization of the gene for a proliferation-related phosphoprotein (oncoprotein 18) expressed in high amounts in acute leukemia. J Biol Chem. 1991 Sep 25; 266(27):17747-53.J Biol Chem1991-09-25T00:00:001991Characterization of the gene for a proliferation-related phosphoprotein (oncoprotein 18) expressed in high amounts in acute leukemia.1988491Bielinska A, Baier L, Hailat N, Strahler JR, Nabel GJ, Hanash SJournal of immunology (Baltimore, Md. : 1950)Expression of a novel nuclear protein in activated and in tat-I expressing T cells. J Immunol. 1991 Feb 01; 146(3):1031-6.J Immunol1991-02-01T00:00:001991Expression of a novel nuclear protein in activated and in tat-I expressing T cells.2062849Hanash SM, Strahler JR, Neel JV, Hailat N, Melhem R, Keim D, Zhu XX, Wagner D, Gage DA, Watson JTProceedings of the National Academy of Sciences of the United States of AmericaHighly resolving two-dimensional gels for protein sequencing. Proc Natl Acad Sci U S A. 1991 Jul 01; 88(13):5709-13.Proc Natl Acad Sci U S A1991-07-01T00:00:001991Highly resolving two-dimensional gels for protein sequencing.2242063Richardson B, Scheinbart L, Strahler J, Gross L, Hanash S, Johnson MArthritis and rheumatismEvidence for impaired T cell DNA methylation in systemic lupus erythematosus and rheumatoid arthritis. Arthritis Rheum. 1990 Nov; 33(11):1665-73.Arthritis Rheum1990-11-01T00:00:001990Evidence for impaired T cell DNA methylation in systemic lupus erythematosus and rheumatoid arthritis.2267130Hailat N, Strahler J, Melhem R, Zhu XX, Brodeur G, Seeger RC, Reynolds CP, Hanash SOncogeneN-myc gene amplification in neuroblastoma is associated with altered phosphorylation of a proliferation related polypeptide (Op18). Oncogene. 1990 Nov; 5(11):1615-8.Oncogene1990-11-01T00:00:001990N-myc gene amplification in neuroblastoma is associated with altered phosphorylation of a proliferation related polypeptide (Op18).2413478Rosenblum BB, Strahler JR, Hanash SM, Whitten CF, Butkunas-Puskorius R, Roberts AProgress in clinical and biological researchPeripheral blood erythroid progenitors from patients with sickle cell anemia: HPLC separation of hemoglobins and the effect of a HbF switching factor. Prog Clin Biol Res. 1985; 191:397-410.Prog Clin Biol Res1985-01-01T00:00:001985Peripheral blood erythroid progenitors from patients with sickle cell anemia: HPLC separation of hemoglobins and the effect of a HbF switching factor.2466646G?rg A, Postel W, G?nther S, Weser J, Strahler JR, Hanash SM, Somerlot L, Kuick RElectrophoresisApproach to stationary two-dimensional pattern: influence of focusing time and immobiline/carrier ampholytes concentrations. Electrophoresis. 1988 Jan; 9(1):37-46.Electrophoresis1988-01-01T00:00:001988Approach to stationary two-dimensional pattern: influence of focusing time and immobiline/carrier ampholytes concentrations.2760073Zhu XX, Kozarsky K, Strahler JR, Eckerskorn C, Lottspeich F, Melhem R, Lowe J, Fox DA, Hanash SM, Atweh GFThe Journal of biological chemistryMolecular cloning of a novel human leukemia-associated gene. Evidence of conservation in animal species. J Biol Chem. 1989 Aug 25; 264(24):14556-60.J Biol Chem1989-08-25T00:00:001989Molecular cloning of a novel human leukemia-associated gene. Evidence of conservation in animal species.3234340Strahler JR, Hanash SM, Somerlot L, Bjellqvist B, G?rg AElectrophoresisEffect of salt on the performance of immobilized pH gradient isoelectric focusing gels. Electrophoresis. 1988 Feb; 9(2):74-80.Electrophoresis1988-02-01T00:00:001988Effect of salt on the performance of immobilized pH gradient isoelectric focusing gels.3408243Robertson PL, Aldrich MS, Hanash SM, Goldstein GWAnnals of neurologyStroke associated with obstructive sleep apnea in a child with sickle cell anemia. Ann Neurol. 1988 Jun; 23(6):614-6.Ann Neurol1988-06-01T00:00:001988Stroke associated with obstructive sleep apnea in a child with sickle cell anemia.6157060Hanash SM, Rucknagel DLThe Medical clinics of North AmericaClinical implications of recent advances in hemoglobin disorders. Med Clin North Am. 1980 Jul; 64(4):775-800.Med Clin North Am1980-07-01T00:00:001980Clinical implications of recent advances in hemoglobin disorders.6169093Hanash SM, Kavadella M, Amanullah A, Scheller K, Bunnell KProgress in clinical and biological researchHigh performance liquid chromatography of hemoglobins: factors affecting resolution. Prog Clin Biol Res. 1981; 60:53-67.Prog Clin Biol Res1981-01-01T00:00:001981High performance liquid chromatography of hemoglobins: factors affecting resolution.6382326Aster JC, Rosenblum BB, Brewer GJ, Hanash SMProgress in clinical and biological researchAnalysis of protein 4.1 structural variation using 2-dimensional polyacrylamide gel electrophoresis. Prog Clin Biol Res. 1984; 159:73-88.Prog Clin Biol Res1984-01-01T00:00:001984Analysis of protein 4.1 structural variation using 2-dimensional polyacrylamide gel electrophoresis.6517866Aster JC, Brewer GJ, Hanash SM, Maisel HThe Biochemical journalBand 4.1-like proteins of the bovine lens. Effects of differentiation, distribution and extraction characteristics. Biochem J. 1984 Dec 01; 224(2):609-16.Biochem J1984-12-01T00:00:001984Band 4.1-like proteins of the bovine lens. Effects of differentiation, distribution and extraction characteristics.6585792Baier LJ, Hanash SM, Erickson RPProceedings of the National Academy of Sciences of the United States of AmericaMice homozygous for chromosomal deletions at the albino locus region lack specific polypeptides in two-dimensional gels. Proc Natl Acad Sci U S A. 1984 Apr; 81(7):2132-6.Proc Natl Acad Sci U S A1984-04-01T00:00:001984Mice homozygous for chromosomal deletions at the albino locus region lack specific polypeptides in two-dimensional gels.7074884Rosenblum BB, Hanash SM, Yew N, Neel JVClinical chemistryTwo-dimensional electrophoretic analysis of erythrocyte membranes. Clin Chem. 1982 Apr; 28(4 Pt 2):925-31.Clin Chem1982-04-01T00:00:001982Two-dimensional electrophoretic analysis of erythrocyte membranes.7789966Kuick R, Asakawa J, Neel JV, Satoh C, Hanash SMGenomicsHigh yield of restriction fragment length polymorphisms in two-dimensional separations of human genomic DNA. Genomics. 1995 Jan 20; 25(2):345-53.Genomics1995-01-20T00:00:001995High yield of restriction fragment length polymorphisms in two-dimensional separations of human genomic DNA.7916459Asakawa J, Kuick R, Neel JV, Kodaira M, Satoh C, Hanash SMProceedings of the National Academy of Sciences of the United States of AmericaGenetic variation detected by quantitative analysis of end-labeled genomic DNA fragments. Proc Natl Acad Sci U S A. 1994 Sep 13; 91(19):9052-6.Proc Natl Acad Sci U S A1994-09-13T00:00:001994Genetic variation detected by quantitative analysis of end-labeled genomic DNA fragments.8095955Turka LA, Gratiot-Deans J, Keim D, Bandukwala R, Green J, Strahler J, Hanash SMJournal of immunology (Baltimore, Md. : 1950)Elevated proliferating cell nuclear antigen levels in immature thymocytes. Dissociation from cell cycle progression. J Immunol. 1993 Apr 01; 150(7):2746-52.J Immunol1993-04-01T00:00:001993Elevated proliferating cell nuclear antigen levels in immature thymocytes. Dissociation from cell cycle progression.8169976Ungar DR, Hailat N, Strahler JR, Kuick RD, Brodeur GM, Seeger RC, Reynolds CP, Hanash SMJournal of the National Cancer InstituteHsp27 expression in neuroblastoma: correlation with disease stage. J Natl Cancer Inst. 1994 May 18; 86(10):780-4.J Natl Cancer Inst1994-05-18T00:00:001994Hsp27 expression in neuroblastoma: correlation with disease stage.8475073Hanash SM, Strahler JR, Chan Y, Kuick R, Teichroew D, Neel JV, Hailat N, Keim DR, Gratiot-Deans J, Ungar DProceedings of the National Academy of Sciences of the United States of AmericaData base analysis of protein expression patterns during T-cell ontogeny and activation. Proc Natl Acad Sci U S A. 1993 Apr 15; 90(8):3314-8.Proc Natl Acad Sci U S A1993-04-15T00:00:001993Data base analysis of protein expression patterns during T-cell ontogeny and activation.8622878Beretta L, Gabbay M, Berger R, Hanash SM, Sonenberg NOncogeneExpression of the protein kinase PKR in modulated by IRF-1 and is reduced in 5q- associated leukemias. Oncogene. 1996 Apr 04; 12(7):1593-6.Oncogene1996-04-04T00:00:001996Expression of the protein kinase PKR in modulated by IRF-1 and is reduced in 5q- associated leukemias.8633086Thoraval D, Asakawa J, Kodaira M, Chang C, Radany E, Kuick R, Lamb B, Richardson B, Neel JV, Glover T, Hanash SProceedings of the National Academy of Sciences of the United States of AmericaA methylated human 9-kb repetitive sequence on acrocentric chromosomes is homologous to a subtelomeric repeat in chimpanzees. Proc Natl Acad Sci U S A. 1996 Apr 30; 93(9):4442-7.Proc Natl Acad Sci U S A1996-04-30T00:00:001996A methylated human 9-kb repetitive sequence on acrocentric chromosomes is homologous to a subtelomeric repeat in chimpanzees.8637723Chang CL, Strahler JR, Thoraval DH, Qian MG, Hinderer R, Hanash SMOncogeneA nucleoside diphosphate kinase A (nm23-H1) serine 120-->glycine substitution in advanced stage neuroblastoma affects enzyme stability and alters protein-protein interaction. Oncogene. 1996 Feb 01; 12(3):659-67.Oncogene1996-02-01T00:00:001996A nucleoside diphosphate kinase A (nm23-H1) serine 120-->glycine substitution in advanced stage neuroblastoma affects enzyme stability and alters protein-protein interaction.8698208Hanash SMGastroenterologyA role for chromosome 1 in colorectal cancer. Gastroenterology. 1996 Jul; 111(1):250-2.Gastroenterology1996-07-01T00:00:001996A role for chromosome 1 in colorectal cancer.8946205Thoraval D, Asakawa J, Wimmer K, Kuick R, Lamb B, Richardson B, Ambros P, Glover T, Hanash SGenes, chromosomes & cancerDemethylation of repetitive DNA sequences in neuroblastoma. Genes Chromosomes Cancer. 1996 Dec; 17(4):234-44.Genes Chromosomes Cancer1996-12-01T00:00:001996Demethylation of repetitive DNA sequences in neuroblastoma.8982607Wimmer K, Kuick R, Thoraval D, Hanash SMElectrophoresisTwo-dimensional separations of the genome and proteome of neuroblastoma cells. Electrophoresis. 1996 Nov; 17(11):1741-51.Electrophoresis1996-11-01T00:00:001996Two-dimensional separations of the genome and proteome of neuroblastoma cells.9056881Wimmer K, Thoraval D, Kuick R, Lamb BJ, Hanash SMBiochemical Society transactionsIdentification of amplifications, deletions and methylation changes in cancer by means of two-dimensional analysis of genomic digests: application to neuroblastoma. Biochem Soc Trans. 1997 Feb; 25(1):262-7.Biochem Soc Trans1997-02-01T00:00:001997Identification of amplifications, deletions and methylation changes in cancer by means of two-dimensional analysis of genomic digests: application to neuroblastoma.9531283Beretta L, Singer NG, Hinderer R, Gingras AC, Richardson B, Hanash SM, Sonenberg NJournal of immunology (Baltimore, Md. : 1950)Differential regulation of translation and eIF4E phosphorylation during human thymocyte maturation. J Immunol. 1998 Apr 01; 160(7):3269-73.J Immunol1998-04-01T00:00:001998Differential regulation of translation and eIF4E phosphorylation during human thymocyte maturation.9787076Curtis LJ, Li Y, Gerbault-Seureau M, Kuick R, Dutrillaux AM, Goubin G, Fawcett J, Cram S, Dutrillaux B, Hanash S, Muleris MGenomicsAmplification of DNA sequences from chromosome 19q13.1 in human pancreatic cell lines. Genomics. 1998 Oct 01; 53(1):42-55.Genomics1998-10-01T00:00:001998Amplification of DNA sequences from chromosome 19q13.1 in human pancreatic cell lines.9926938Wimmer K, Zhu XX, Lamb BJ, Kuick R, Ambros PF, Kovar H, Thoraval D, Motyka S, Alberts JR, Hanash SMOncogeneCo-amplification of a novel gene, NAG, with the N-myc gene in neuroblastoma. Oncogene. 1999 Jan 07; 18(1):233-8.Oncogene1999-01-07T00:00:001999Co-amplification of a novel gene, NAG, with the N-myc gene in neuroblastoma.10027336Soldes OS, Kuick RD, Thompson IA, Hughes SJ, Orringer MB, Iannettoni MD, Hanash SM, Beer DGBritish journal of cancerDifferential expression of Hsp27 in normal oesophagus, Barrett's metaplasia and oesophageal adenocarcinomas. Br J Cancer. 1999 Feb; 79(3-4):595-603.Br J Cancer1999-02-01T00:00:001999Differential expression of Hsp27 in normal oesophagus, Barrett's metaplasia and oesophageal adenocarcinomas.10567930Jin X, Chen Y, Lubman DM, Misek D, Hanash SMRapid communications in mass spectrometry : RCMCapillary electrophoresis/tandem mass spectrometry for analysis of proteins from two-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis. Rapid Commun Mass Spectrom. 1999; 13(23):2327-34.Rapid Commun Mass Spectrom1999-01-01T00:00:001999Capillary electrophoresis/tandem mass spectrometry for analysis of proteins from two-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis.10728696Lin L, Aggarwal S, Glover TW, Orringer MB, Hanash S, Beer DGCancer researchA minimal critical region of the 8p22-23 amplicon in esophageal adenocarcinomas defined using sequence tagged site-amplification mapping and quantitative polymerase chain reaction includes the GATA-4 gene. Cancer Res. 2000 Mar 01; 60(5):1341-7.Cancer Res2000-03-01T00:00:002000A minimal critical region of the 8p22-23 amplicon in esophageal adenocarcinomas defined using sequence tagged site-amplification mapping and quantitative polymerase chain reaction includes the GATA-4 gene.10786892Hanash SMElectrophoresisBiomedical applications of two-dimensional electrophoresis using immobilized pH gradients: current status. Electrophoresis. 2000 Apr; 21(6):1202-9.Electrophoresis2000-04-01T00:00:002000Biomedical applications of two-dimensional electrophoresis using immobilized pH gradients: current status.11097332Hanash SMClinical chemistry and laboratory medicineOperomics: molecular analysis of tissues from DNA to RNA to protein. Clin Chem Lab Med. 2000 Sep; 38(9):805-13.Clin Chem Lab Med2000-09-01T00:00:002000Operomics: molecular analysis of tissues from DNA to RNA to protein.11120763Grolleau A, Kaplan MJ, Hanash SM, Beretta L, Richardson BThe Journal of clinical investigationImpaired translational response and increased protein kinase PKR expression in T cells from lupus patients. J Clin Invest. 2000 Dec; 106(12):1561-8.J Clin Invest2000-12-01T00:00:002000Impaired translational response and increased protein kinase PKR expression in T cells from lupus patients.11156406Lin L, Prescott MS, Zhu Z, Singh P, Chun SY, Kuick RD, Hanash SM, Orringer MB, Glover TW, Beer DGCancer researchIdentification and characterization of a 19q12 amplicon in esophageal adenocarcinomas reveals cyclin E as the best candidate gene for this amplicon. Cancer Res. 2000 Dec 15; 60(24):7021-7.Cancer Res2000-12-15T00:00:002000Identification and characterization of a 19q12 amplicon in esophageal adenocarcinomas reveals cyclin E as the best candidate gene for this amplicon.11278880Charrin S, Le Naour F, Oualid M, Billard M, Faure G, Hanash SM, Boucheix C, Rubinstein EThe Journal of biological chemistryThe major CD9 and CD81 molecular partner. Identification and characterization of the complexes. J Biol Chem. 2001 Apr 27; 276(17):14329-37.J Biol Chem2001-01-18T00:00:002001The major CD9 and CD81 molecular partner. Identification and characterization of the complexes.11279020Le Naour F, Hohenkirk L, Grolleau A, Misek DE, Lescure P, Geiger JD, Hanash S, Beretta LThe Journal of biological chemistryProfiling changes in gene expression during differentiation and maturation of monocyte-derived dendritic cells using both oligonucleotide microarrays and proteomics. J Biol Chem. 2001 May 25; 276(21):17920-31.J Biol Chem2001-03-08T00:00:002001Profiling changes in gene expression during differentiation and maturation of monocyte-derived dendritic cells using both oligonucleotide microarrays and proteomics.11708463Verma M, Wright GL, Hanash SM, Gopal-Srivastava R, Srivastava SAnnals of the New York Academy of SciencesProteomic approaches within the NCI early detection research network for the discovery and identification of cancer biomarkers. Ann N Y Acad Sci. 2001 Sep; 945:103-15.Ann N Y Acad Sci2001-09-01T00:00:002001Proteomic approaches within the NCI early detection research network for the discovery and identification of cancer biomarkers.11721630Hanash SProteomicsMining the cancer proteome. Proteomics. 2001 Oct; 1(10):1189-90.Proteomics2001-10-01T00:00:002001Mining the cancer proteome.11807986Wimmer K, Zhu Xx XX, Rouillard JM, Ambros PF, Lamb BJ, Kuick R, Eckart M, Weinh?usl A, Fonatsch C, Hanash SMGenes, chromosomes & cancerCombined restriction landmark genomic scanning and virtual genome scans identify a novel human homeobox gene, ALX3, that is hypermethylated in neuroblastoma. Genes Chromosomes Cancer. 2002 Mar; 33(3):285-94.Genes Chromosomes Cancer2002-03-01T00:00:002002Combined restriction landmark genomic scanning and virtual genome scans identify a novel human homeobox gene, ALX3, that is hypermethylated in neuroblastoma.11943782Grolleau A, Bowman J, Pradet-Balade B, Puravs E, Hanash S, Garcia-Sanz JA, Beretta LThe Journal of biological chemistryGlobal and specific translational control by rapamycin in T cells uncovered by microarrays and proteomics. J Biol Chem. 2002 Jun 21; 277(25):22175-84.J Biol Chem2002-04-09T00:00:002002Global and specific translational control by rapamycin in T cells uncovered by microarrays and proteomics.12033786Girard S, Shalhoub P, Lescure P, Sabile A, Misek DE, Hanash S, Br?chot C, Beretta LVirologyAn altered cellular response to interferon and up-regulation of interleukin-8 induced by the hepatitis C viral protein NS5A uncovered by microarray analysis. Virology. 2002 Apr 10; 295(2):272-83.Virology2002-04-10T00:00:002002An altered cellular response to interferon and up-regulation of interleukin-8 induced by the hepatitis C viral protein NS5A uncovered by microarray analysis.12096112Chen G, Gharib TG, Huang CC, Taylor JM, Misek DE, Kardia SL, Giordano TJ, Iannettoni MD, Orringer MB, Hanash SM, Beer DGMolecular & cellular proteomics : MCPDiscordant protein and mRNA expression in lung adenocarcinomas. Mol Cell Proteomics. 2002 Apr; 1(4):304-13.Mol Cell Proteomics2002-04-01T00:00:002002Discordant protein and mRNA expression in lung adenocarcinomas.12473593Moran CJ, Arenberg DA, Huang CC, Giordano TJ, Thomas DG, Misek DE, Chen G, Iannettoni MD, Orringer MB, Hanash S, Beer DGClinical cancer research : an official journal of the American Association for Cancer ResearchRANTES expression is a predictor of survival in stage I lung adenocarcinoma. Clin Cancer Res. 2002 Dec; 8(12):3803-12.Clin Cancer Res2002-12-01T00:00:002002RANTES expression is a predictor of survival in stage I lung adenocarcinoma.12493773Shin BK, Wang H, Yim AM, Le Naour F, Brichory F, Jang JH, Zhao R, Puravs E, Tra J, Michael CW, Misek DE, Hanash SMThe Journal of biological chemistryGlobal profiling of the cell surface proteome of cancer cells uncovers an abundance of proteins with chaperone function. J Biol Chem. 2003 Feb 28; 278(9):7607-16.J Biol Chem2002-12-18T00:00:002002Global profiling of the cell surface proteome of cancer cells uncovers an abundance of proteins with chaperone function.12644570Chen G, Wang H, Gharib TG, Huang CC, Thomas DG, Shedden KA, Kuick R, Taylor JM, Kardia SL, Misek DE, Giordano TJ, Iannettoni MD, Orringer MB, Hanash SM, Beer DGMolecular & cellular proteomics : MCPOverexpression of oncoprotein 18 correlates with poor differentiation in lung adenocarcinomas. Mol Cell Proteomics. 2003 Feb; 2(2):107-16.Mol Cell Proteomics2003-02-12T00:00:002003Overexpression of oncoprotein 18 correlates with poor differentiation in lung adenocarcinomas.12659729Wang H, Hanash SJournal of chromatography. B, Analytical technologies in the biomedical and life sciencesMulti-dimensional liquid phase based separations in proteomics. J Chromatogr B Analyt Technol Biomed Life Sci. 2003 Apr 05; 787(1):11-8.J Chromatogr B Analyt Technol Biomed Life Sci2003-04-05T00:00:002003Multi-dimensional liquid phase based separations in proteomics.12782598Schwartz DR, Wu R, Kardia SL, Levin AM, Huang CC, Shedden KA, Kuick R, Misek DE, Hanash SM, Taylor JM, Reed H, Hendrix N, Zhai Y, Fearon ER, Cho KRCancer researchNovel candidate targets of beta-catenin/T-cell factor signaling identified by gene expression profiling of ovarian endometrioid adenocarcinomas. Cancer Res. 2003 Jun 01; 63(11):2913-22.Cancer Res2003-06-01T00:00:002003Novel candidate targets of beta-catenin/T-cell factor signaling identified by gene expression profiling of ovarian endometrioid adenocarcinomas.12882525Shin BK, Wang H, Hanash SJournal of mammary gland biology and neoplasiaProteomics approaches to uncover the repertoire of circulating biomarkers for breast cancer. J Mammary Gland Biol Neoplasia. 2002 Oct; 7(4):407-13.J Mammary Gland Biol Neoplasia2002-10-01T00:00:002002Proteomics approaches to uncover the repertoire of circulating biomarkers for breast cancer.12908549Madoz-Gurpide J, Hanash SMAdvances in experimental medicine and biologyMolecular analysis of cancer using DNA and protein microarrays. Adv Exp Med Biol. 2003; 532:51-8.Adv Exp Med Biol2003-01-01T00:00:002003Molecular analysis of cancer using DNA and protein microarrays.12937144van den Boom J, Wolter M, Kuick R, Misek DE, Youkilis AS, Wechsler DS, Sommer C, Reifenberger G, Hanash SMThe American journal of pathologyCharacterization of gene expression profiles associated with glioma progression using oligonucleotide-based microarray analysis and real-time reverse transcription-polymerase chain reaction. Am J Pathol. 2003 Sep; 163(3):1033-43.Am J Pathol2003-09-01T00:00:002003Characterization of gene expression profiles associated with glioma progression using oligonucleotide-based microarray analysis and real-time reverse transcription-polymerase chain reaction.12960310Grolleau A, Misek DE, Kuick R, Hanash S, Mul? JJJournal of immunology (Baltimore, Md. : 1950)Inducible expression of macrophage receptor Marco by dendritic cells following phagocytic uptake of dead cells uncovered by oligonucleotide arrays. J Immunol. 2003 Sep 15; 171(6):2879-88.J Immunol2003-09-15T00:00:002003Inducible expression of macrophage receptor Marco by dendritic cells following phagocytic uptake of dead cells uncovered by oligonucleotide arrays.12970743Miller CT, Chen G, Gharib TG, Wang H, Thomas DG, Misek DE, Giordano TJ, Yee J, Orringer MB, Hanash SM, Beer DGOncogeneIncreased C-CRK proto-oncogene expression is associated with an aggressive phenotype in lung adenocarcinomas. Oncogene. 2003 Sep 11; 22(39):7950-7.Oncogene2003-09-11T00:00:002003Increased C-CRK proto-oncogene expression is associated with an aggressive phenotype in lung adenocarcinomas.14595827Hanash SProteomicsThe emerging field of protein microarrays. Proteomics. 2003 Nov; 3(11):2075.Proteomics2003-11-01T00:00:002003The emerging field of protein microarrays.14625857Jang JH, Hanash SProteomicsProfiling of the cell surface proteome. Proteomics. 2003 Oct; 3(10):1947-54.Proteomics2003-10-01T00:00:002003Profiling of the cell surface proteome.14630877Chen J, Mo R, Lescure PA, Misek DE, Hanash S, Rochford R, Hobbs M, Yung RLThe journals of gerontology. Series A, Biological sciences and medical sciencesAging is associated with increased T-cell chemokine expression in C57BL/6 mice. J Gerontol A Biol Sci Med Sci. 2003 Nov; 58(11):975-83.J Gerontol A Biol Sci Med Sci2003-11-01T00:00:002003Aging is associated with increased T-cell chemokine expression in C57BL/6 mice.14963017Cuezva JM, Chen G, Alonso AM, Isidoro A, Misek DE, Hanash SM, Beer DGCarcinogenesisThe bioenergetic signature of lung adenocarcinomas is a molecular marker of cancer diagnosis and prognosis. Carcinogenesis. 2004 Jul; 25(7):1157-63.Carcinogenesis2004-02-12T00:00:002004The bioenergetic signature of lung adenocarcinomas is a molecular marker of cancer diagnosis and prognosis.15023835Schmalbach CE, Chepeha DB, Giordano TJ, Rubin MA, Teknos TN, Bradford CR, Wolf GT, Kuick R, Misek DE, Trask DK, Hanash SArchives of otolaryngology--head & neck surgeryMolecular profiling and the identification of genes associated with metastatic oral cavity/pharynx squamous cell carcinoma. Arch Otolaryngol Head Neck Surg. 2004 Mar; 130(3):295-302.Arch Otolaryngol Head Neck Surg2004-03-01T00:00:002004Molecular profiling and the identification of genes associated with metastatic oral cavity/pharynx squamous cell carcinoma.15113094Hanash SJournal of proteome researchBuilding a foundation for the human proteome: the role of the Human Proteome Organization. J Proteome Res. 2004 Mar-Apr; 3(2):197-9.J Proteome Res2004-03-01T00:00:002004Building a foundation for the human proteome: the role of the Human Proteome Organization.15308637Barnes BJ, Richards J, Mancl M, Hanash S, Beretta L, Pitha PMThe Journal of biological chemistryGlobal and distinct targets of IRF-5 and IRF-7 during innate response to viral infection. J Biol Chem. 2004 Oct 22; 279(43):45194-207.J Biol Chem2004-08-11T00:00:002004Global and distinct targets of IRF-5 and IRF-7 during innate response to viral infection.15349911Girard S, Vossman E, Misek DE, Podevin P, Hanash S, Br?chot C, Beretta LHepatology (Baltimore, Md.)Hepatitis C virus NS5A-regulated gene expression and signaling revealed via microarray and comparative promoter analyses. Hepatology. 2004 Sep; 40(3):708-18.Hepatology2004-09-01T00:00:002004Hepatitis C virus NS5A-regulated gene expression and signaling revealed via microarray and comparative promoter analyses.15502247Imafuku Y, Omenn GS, Hanash SDisease markersProteomics approaches to identify tumor antigen directed autoantibodies as cancer biomarkers. Dis Markers. 2004; 20(3):149-53.Dis Markers2004-01-01T00:00:002004Proteomics approaches to identify tumor antigen directed autoantibodies as cancer biomarkers.15502640Binkley CE, Zhang L, Greenson JK, Giordano TJ, Kuick R, Misek D, Hanash S, Logsdon CD, Simeone DMPancreasThe molecular basis of pancreatic fibrosis: common stromal gene expression in chronic pancreatitis and pancreatic adenocarcinoma. Pancreas. 2004 Nov; 29(4):254-63.Pancreas2004-11-01T00:00:002004The molecular basis of pancreatic fibrosis: common stromal gene expression in chronic pancreatitis and pancreatic adenocarcinoma.15546137Marcus B, Arenberg D, Lee J, Kleer C, Chepeha DB, Schmalbach CE, Islam M, Paul S, Pan Q, Hanash S, Kuick R, Merajver SD, Teknos TNCancerPrognostic factors in oral cavity and oropharyngeal squamous cell carcinoma. Cancer. 2004 Dec 15; 101(12):2779-87.Cancer2004-12-15T00:00:002004Prognostic factors in oral cavity and oropharyngeal squamous cell carcinoma.15548375Engstrom LD, Youkilis AS, Gorelick JL, Zheng D, Ackley V, Petroff CA, Benson LQ, Coon MR, Zhu X, Hanash SM, Wechsler DSNeoplasia (New York, N.Y.)Mxi1-0, an alternatively transcribed Mxi1 isoform, is overexpressed in glioblastomas. Neoplasia. 2004 Sep-Oct; 6(5):660-73.Neoplasia2004-09-01T00:00:002004Mxi1-0, an alternatively transcribed Mxi1 isoform, is overexpressed in glioblastomas.15580857Nakamura K, Aebersold R, Bairoch A, Dunn M, Celis J, Hanash S, Hochstrasser D, Humphrey-Smith I, James P, Klose J, LaBaer J, Langen H, Mann M, Parekh R, Patterson S, Pearce C, Poepstorff P, Simpson RJ, Tomlinson I, Tsugita A, Yates JSeikagaku. The Journal of Japanese Biochemical Society[From genome to proteome--aim of human proteomics]. Seikagaku. 2004 Oct; 76(10):1271-4.Seikagaku2004-10-01T00:00:002004[From genome to proteome--aim of human proteomics].15652816Steel LF, Haab BB, Hanash SMJournal of chromatography. B, Analytical technologies in the biomedical and life sciencesMethods of comparative proteomic profiling for disease diagnostics. J Chromatogr B Analyt Technol Biomed Life Sci. 2005 Feb 05; 815(1-2):275-84.J Chromatogr B Analyt Technol Biomed Life Sci2005-02-05T00:00:002005Methods of comparative proteomic profiling for disease diagnostics.15733672Williams TM, Williams ME, Kuick R, Misek D, McDonagh K, Hanash S, Innis JWDevelopmental biologyCandidate downstream regulated genes of HOX group 13 transcription factors with and without monomeric DNA binding capability. Dev Biol. 2005 Mar 15; 279(2):462-80.Dev Biol2005-03-15T00:00:002005Candidate downstream regulated genes of HOX group 13 transcription factors with and without monomeric DNA binding capability.15788657Shedden KA, Kshirsagar MP, Schwartz DR, Wu R, Yu H, Misek DE, Hanash S, Katabuchi H, Ellenson LH, Fearon ER, Cho KRClinical cancer research : an official journal of the American Association for Cancer ResearchHistologic type, organ of origin, and Wnt pathway status: effect on gene expression in ovarian and uterine carcinomas. Clin Cancer Res. 2005 Mar 15; 11(6):2123-31.Clin Cancer Res2005-03-15T00:00:002005Histologic type, organ of origin, and Wnt pathway status: effect on gene expression in ovarian and uterine carcinomas.16007166Giordano TJ, Kuick R, Thomas DG, Misek DE, Vinco M, Sanders D, Zhu Z, Ciampi R, Roh M, Shedden K, Gauger P, Doherty G, Thompson NW, Hanash S, Koenig RJ, Nikiforov YEOncogeneMolecular classification of papillary thyroid carcinoma: distinct BRAF, RAS, and RET/PTC mutation-specific gene expression profiles discovered by DNA microarray analysis. Oncogene. 2005 Oct 06; 24(44):6646-56.Oncogene2005-10-06T00:00:002005Molecular classification of papillary thyroid carcinoma: distinct BRAF, RAS, and RET/PTC mutation-specific gene expression profiles discovered by DNA microarray analysis.16047307Misek DE, Kuick R, Wang H, Galchev V, Deng B, Zhao R, Tra J, Pisano MR, Amunugama R, Allen D, Walker AK, Strahler JR, Andrews P, Omenn GS, Hanash SMProteomicsA wide range of protein isoforms in serum and plasma uncovered by a quantitative intact protein analysis system. Proteomics. 2005 Aug; 5(13):3343-52.Proteomics2005-08-01T00:00:002005A wide range of protein isoforms in serum and plasma uncovered by a quantitative intact protein analysis system.16104056Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, Aebersold R, Eng J, Hancock WS, Hefta SA, Meyer H, Paik YK, Yoo JS, Ping P, Pounds J, Adkins J, Qian X, Wang R, Wasinger V, Wu CY, Zhao X, Zeng R, Archakov A, Tsugita A, Beer I, Pandey A, Pisano M, Andrews P, Tammen H, Speicher DW, Hanash SMProteomicsOverview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database. Proteomics. 2005 Aug; 5(13):3226-45.Proteomics2005-08-01T00:00:002005Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database.16117833Gao WM, Kuick R, Orchekowski RP, Misek DE, Qiu J, Greenberg AK, Rom WN, Brenner DE, Omenn GS, Haab BB, Hanash SMBMC cancerDistinctive serum protein profiles involving abundant proteins in lung cancer patients based upon antibody microarray analysis. BMC Cancer. 2005 Aug 23; 5:110.BMC Cancer2005-08-23T00:00:002005Distinctive serum protein profiles involving abundant proteins in lung cancer patients based upon antibody microarray analysis.16609007Giordano TJ, Au AY, Kuick R, Thomas DG, Rhodes DR, Wilhelm KG, Vinco M, Misek DE, Sanders D, Zhu Z, Ciampi R, Hanash S, Chinnaiyan A, Clifton-Bligh RJ, Robinson BG, Nikiforov YE, Koenig RJClinical cancer research : an official journal of the American Association for Cancer ResearchDelineation, functional validation, and bioinformatic evaluation of gene expression in thyroid follicular carcinomas with the PAX8-PPARG translocation. Clin Cancer Res. 2006 Apr 01; 12(7 Pt 1):1983-93.Clin Cancer Res2006-04-01T00:00:002006Delineation, functional validation, and bioinformatic evaluation of gene expression in thyroid follicular carcinomas with the PAX8-PPARG translocation.16889424Faca V, Coram M, Phanstiel D, Glukhova V, Zhang Q, Fitzgibbon M, McIntosh M, Hanash SJournal of proteome researchQuantitative analysis of acrylamide labeled serum proteins by LC-MS/MS. J Proteome Res. 2006 Aug; 5(8):2009-18.J Proteome Res2006-08-01T00:00:002006Quantitative analysis of acrylamide labeled serum proteins by LC-MS/MS.16943187Mannov? P, Fang R, Wang H, Deng B, McIntosh MW, Hanash SM, Beretta LMolecular & cellular proteomics : MCPModification of host lipid raft proteome upon hepatitis C virus replication. Mol Cell Proteomics. 2006 Dec; 5(12):2319-25.Mol Cell Proteomics2006-08-29T00:00:002006Modification of host lipid raft proteome upon hepatitis C virus replication.17184556Davis MA, Hanash SBreast cancer research : BCRHigh-throughput genomic technology in research and clinical management of breast cancer. Plasma-based proteomics in early detection and therapy. Breast Cancer Res. 2006; 8(6):217.Breast Cancer Res2006-01-01T00:00:002006High-throughput genomic technology in research and clinical management of breast cancer. Plasma-based proteomics in early detection and therapy.17320282Kuick R, Misek DE, Monsma DJ, Webb CP, Wang H, Peterson KJ, Pisano M, Omenn GS, Hanash SMCancer lettersDiscovery of cancer biomarkers through the use of mouse models. Cancer Lett. 2007 Apr 28; 249(1):40-8.Cancer Lett2007-02-22T00:00:002007Discovery of cancer biomarkers through the use of mouse models.18089831Pereira-Faca SR, Kuick R, Puravs E, Zhang Q, Krasnoselsky AL, Phanstiel D, Qiu J, Misek DE, Hinderer R, Tammemagi M, Landi MT, Caporaso N, Pfeiffer R, Edelstein C, Goodman G, Barnett M, Thornquist M, Brenner D, Hanash SMCancer researchIdentification of 14-3-3 theta as an antigen that induces a humoral response in lung cancer. Cancer Res. 2007 Dec 15; 67(24):12000-6.Cancer Res2007-12-15T00:00:002007Identification of 14-3-3 theta as an antigen that induces a humoral response in lung cancer.18259167Mathivanan S, Ahmed M, Ahn NG, Alexandre H, Amanchy R, Andrews PC, Bader JS, Balgley BM, Bantscheff M, Bennett KL, Bj?rling E, Blagoev B, Bose R, Brahmachari SK, Burlingame AS, Bustelo XR, Cagney G, Cantin GT, Cardasis HL, Celis JE, Chaerkady R, Chu F, Cole PA, Costello CE, Cotter RJ, Crockett D, DeLany JP, De Marzo AM, DeSouza LV, Deutsch EW, Dransfield E, Drewes G, Droit A, Dunn MJ, Elenitoba-Johnson K, Ewing RM, Van Eyk J, Faca V, Falkner J, Fang X, Fenselau C, Figeys D, Gagn? P, Gelfi C, Gevaert K, Gimble JM, Gnad F, Goel R, Gromov P, Hanash SM, Hancock WS, Harsha HC, Hart G, Hays F, He F, Hebbar P, Helsens K, Hermeking H, Hide W, Hjern? 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Nat Biotechnol. 2008 Feb; 26(2):164-7.Nat Biotechnol2008-02-01T00:00:002008Human Proteinpedia enables sharing of human protein data.18311905Pitteri SJ, Faca VM, Kelly-Spratt KS, Kasarda AE, Wang H, Zhang Q, Newcomb L, Krasnoselsky A, Paczesny S, Choi G, Fitzgibbon M, McIntosh MW, Kemp CJ, Hanash SMJournal of proteome researchPlasma proteome profiling of a mouse model of breast cancer identifies a set of up-regulated proteins in common with human breast cancer cells. J Proteome Res. 2008 Apr; 7(4):1481-9.J Proteome Res2008-02-27T00:00:002008Plasma proteome profiling of a mouse model of breast cancer identifies a set of up-regulated proteins in common with human breast cancer cells.18385731Hanash SM, Pitteri SJ, Faca VMNatureMining the plasma proteome for cancer biomarkers. Nature. 2008 Apr 03; 452(7187):571-9.Nature2008-04-03T00:00:002008Mining the plasma proteome for cancer biomarkers.18512973Wang H, Hanash SMJournal of proteome researchIncreased throughput and reduced carryover of mass spectrometry-based proteomics using a high-efficiency nonsplit nanoflow parallel dual-column capillary HPLC system. J Proteome Res. 2008 Jul; 7(7):2743-55.J Proteome Res2008-05-31T00:00:002008Increased throughput and reduced carryover of mass spectrometry-based proteomics using a high-efficiency nonsplit nanoflow parallel dual-column capillary HPLC system.18522751Zhang Q, Menon R, Deutsch EW, Pitteri SJ, Faca VM, Wang H, Newcomb LF, Depinho RA, Bardeesy N, Dinulescu D, Hung KE, Kucherlapati R, Jacks T, Politi K, Aebersold R, Omenn GS, States DJ, Hanash SMGenome biologyA mouse plasma peptide atlas as a resource for disease proteomics. Genome Biol. 2008; 9(6):R93.Genome Biol2008-06-03T00:00:002008A mouse plasma peptide atlas as a resource for disease proteomics.18641660Director's Challenge Consortium for the Molecular Classification of Lung Adenocarcinoma, Shedden K, Taylor JM, Enkemann SA, Tsao MS, Yeatman TJ, Gerald WL, Eschrich S, Jurisica I, Giordano TJ, Misek DE, Chang AC, Zhu CQ, Strumpf D, Hanash S, Shepherd FA, Ding K, Seymour L, Naoki K, Pennell N, Weir B, Verhaak R, Ladd-Acosta C, Golub T, Gruidl M, Sharma A, Szoke J, Zakowski M, Rusch V, Kris M, Viale A, Motoi N, Travis W, Conley B, Seshan VE, Meyerson M, Kuick R, Dobbin KK, Lively T, Jacobson JW, Beer DGNature medicineGene expression-based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study. Nat Med. 2008 Aug; 14(8):822-7.Nat Med2008-07-20T00:00:002008Gene expression-based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study.19118015Menon R, Zhang Q, Zhang Y, Fermin D, Bardeesy N, DePinho RA, Lu C, Hanash SM, Omenn GS, States DJCancer researchIdentification of novel alternative splice isoforms of circulating proteins in a mouse model of human pancreatic cancer. Cancer Res. 2009 Jan 01; 69(1):300-9.Cancer Res2009-01-01T00:00:002009Identification of novel alternative splice isoforms of circulating proteins in a mouse model of human pancreatic cancer.19155298Fa?a VM, Hanash SMCancer researchIn-depth proteomics to define the cell surface and secretome of ovarian cancer cells and processes of protein shedding. Cancer Res. 2009 Feb 01; 69(3):728-30.Cancer Res2009-01-20T00:00:002009In-depth proteomics to define the cell surface and secretome of ovarian cancer cells and processes of protein shedding.19241042Faca V, Wang H, Hanash SMethods in molecular biology (Clifton, N.J.)Proteomic global profiling for cancer biomarker discovery. Methods Mol Biol. 2009; 492:309-20.Methods Mol Biol2009-01-01T00:00:002009Proteomic global profiling for cancer biomarker discovery.19360088Harsha HC, Kandasamy K, Ranganathan P, Rani S, Ramabadran S, Gollapudi S, Balakrishnan L, Dwivedi SB, Telikicherla D, Selvan LD, Goel R, Mathivanan S, Marimuthu A, Kashyap M, Vizza RF, Mayer RJ, Decaprio JA, Srivastava S, Hanash SM, Hruban RH, Pandey APLoS medicineA compendium of potential biomarkers of pancreatic cancer. PLoS Med. 2009 Apr 07; 6(4):e1000046.PLoS Med2009-04-07T00:00:002009A compendium of potential biomarkers of pancreatic cancer.19782370Zeng Z, Hincapie M, Haab BB, Hanash S, Pitteri SJ, Kluck S, Hogan JM, Kennedy J, Hancock WSJournal of chromatography. AThe development of an integrated platform to identify breast cancer glycoproteome changes in human serum. J Chromatogr A. 2010 May 07; 1217(19):3307-15.J Chromatogr A2009-09-16T00:00:002009The development of an integrated platform to identify breast cancer glycoproteome changes in human serum.19817497Wang H, Wong CH, Chin A, Kennedy J, Zhang Q, Hanash SJournal of proteome researchQuantitative serum proteomics using dual stable isotope coding and nano LC-MS/MSMS. J Proteome Res. 2009 Dec; 8(12):5412-22.J Proteome Res2009-12-01T00:00:002009Quantitative serum proteomics using dual stable isotope coding and nano LC-MS/MSMS.20959476Pitteri SJ, Amon LM, Busald Buson T, Zhang Y, Johnson MM, Chin A, Kennedy J, Wong CH, Zhang Q, Wang H, Lampe PD, Prentice RL, McIntosh MW, Hanash SM, Li CICancer researchDetection of elevated plasma levels of epidermal growth factor receptor before breast cancer diagnosis among hormone therapy users. Cancer Res. 2010 Nov 01; 70(21):8598-606.Cancer Res2010-10-19T00:00:002010Detection of elevated plasma levels of epidermal growth factor receptor before breast cancer diagnosis among hormone therapy users.21136931Souchelnytskyi S, Hanash SProteomics. Clinical applicationsFocus on breast cancer proteomics. Proteomics Clin Appl. 2009 Jan; 3(1):5.Proteomics Clin Appl2009-01-01T00:00:002009Focus on breast cancer proteomics.21364687Hanash SM, Baik CS, Kallioniemi ONature reviews. Clinical oncologyEmerging molecular biomarkers--blood-based strategies to detect and monitor cancer. Nat Rev Clin Oncol. 2011 Mar; 8(3):142-50.Nat Rev Clin Oncol2011-03-01T00:00:002011Emerging molecular biomarkers--blood-based strategies to detect and monitor cancer.21375461Hanash SOmics : a journal of integrative biologyProgress in mining the human proteome for disease applications. OMICS. 2011 Mar; 15(3):133-9.OMICS2011-03-01T00:00:002011Progress in mining the human proteome for disease applications.21454417Hanash SCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive OncologyHarnessing the immune response for cancer detection. Cancer Epidemiol Biomarkers Prev. 2011 Apr; 20(4):569-70.Cancer Epidemiol Biomarkers Prev2011-04-01T00:00:002011Harnessing the immune response for cancer detection.21468941Wang H, Hanash SMethods in molecular biology (Clifton, N.J.)Intact-protein analysis system for discovery of serum-based disease biomarkers. Methods Mol Biol. 2011; 728:69-85.Methods Mol Biol2011-01-01T00:00:002011Intact-protein analysis system for discovery of serum-based disease biomarkers.21589862Kelly-Spratt KS, Pitteri SJ, Gurley KE, Liggitt D, Chin A, Kennedy J, Wong CH, Zhang Q, Buson TB, Wang H, Hanash SM, Kemp CJPloS onePlasma proteome profiles associated with inflammation, angiogenesis, and cancer. PLoS One. 2011 May 12; 6(5):e19721.PLoS One2011-05-12T00:00:002011Plasma proteome profiles associated with inflammation, angiogenesis, and cancer.22030259Hanash SMGenome medicineWhy have protein biomarkers not reached the clinic? Genome Med. 2011 Oct 26; 3(10):66.Genome Med2011-10-26T00:00:002011Why have protein biomarkers not reached the clinic?22315094Press JZ, Reyes M, Pitteri SJ, Pennil C, Garcia R, Goff BA, Hanash SM, Swisher EMInternational journal of gynecological cancer : official journal of the International Gynecological Cancer SocietyMicroparticles from ovarian carcinomas are shed into ascites and promote cell migration. Int J Gynecol Cancer. 2012 May; 22(4):546-52.Int J Gynecol Cancer2012-05-01T00:00:002012Microparticles from ovarian carcinomas are shed into ascites and promote cell migration.22367215Amon LM, Pitteri SJ, Li CI, McIntosh M, Ladd JJ, Disis M, Porter P, Wong CH, Zhang Q, Lampe P, Prentice RL, Hanash SMCancer researchConcordant release of glycolysis proteins into the plasma preceding a diagnosis of ER+ breast cancer. Cancer Res. 2012 Apr 15; 72(8):1935-42.Cancer Res2012-02-24T00:00:002012Concordant release of glycolysis proteins into the plasma preceding a diagnosis of ER+ breast cancer.22407608Hanash S, Schliekelman M, Zhang Q, Taguchi AWiley interdisciplinary reviews. Systems biology and medicineIntegration of proteomics into systems biology of cancer. Wiley Interdiscip Rev Syst Biol Med. 2012 Jul-Aug; 4(4):327-37.Wiley Interdiscip Rev Syst Biol Med2012-03-08T00:00:002012Integration of proteomics into systems biology of cancer.22930569Hanash SProteomics. Clinical applicationsA call for a fresh new look at the plasma proteome. Proteomics Clin Appl. 2012 Oct; 6(9-10):443-6.Proteomics Clin Appl2012-10-01T00:00:002012A call for a fresh new look at the plasma proteome.23001822Thom? CH, dos Santos GA, Ferreira GA, Scheucher PS, Izumi C, Leopoldino AM, Sim?o AM, Ciancaglini P, de Oliveira KT, Chin A, Hanash SM, Falc?o RP, Rego EM, Greene LJ, Fa?a VMMolecular & cellular proteomics : MCPLinker for activation of T-cell family member2 (LAT2) a lipid raft adaptor protein for AKT signaling, is an early mediator of alkylphospholipid anti-leukemic activity. Mol Cell Proteomics. 2012 Dec; 11(12):1898-912.Mol Cell Proteomics2012-09-22T00:00:002012Linker for activation of T-cell family member2 (LAT2) a lipid raft adaptor protein for AKT signaling, is an early mediator of alkylphospholipid anti-leukemic activity.23489270Faca V, Hanash SExpert opinion on medical diagnosticsIn-depth quantitative proteomics for pancreatic cancer biomarker discovery. Expert Opin Med Diagn. 2007 Sep; 1(1):81-9.Expert Opin Med Diagn2007-09-01T00:00:002007In-depth quantitative proteomics for pancreatic cancer biomarker discovery.23791624Hansen JA, Hanash SM, Tabellini L, Baik C, Lawler RL, Grogan BM, Storer B, Chin A, Johnson M, Wong CH, Zhang Q, Martin PJ, McDonald GBBiology of blood and marrow transplantation : journal of the American Society for Blood and Marrow TransplantationA novel soluble form of Tim-3 associated with severe graft-versus-host disease. Biol Blood Marrow Transplant. 2013 Sep; 19(9):1323-30.Biol Blood Marrow Transplant2013-06-17T00:00:002013A novel soluble form of Tim-3 associated with severe graft-versus-host disease.23924003Vander Lugt MT, Braun TM, Hanash S, Ritz J, Ho VT, Antin JH, Zhang Q, Wong CH, Wang H, Chin A, Gomez A, Harris AC, Levine JE, Choi SW, Couriel D, Reddy P, Ferrara JL, Paczesny SThe New England journal of medicineST2 as a marker for risk of therapy-resistant graft-versus-host disease and death. N Engl J Med. 2013 Aug 08; 369(6):529-39.N Engl J Med2013-08-08T00:00:002013ST2 as a marker for risk of therapy-resistant graft-versus-host disease and death.24077454Tam KW, Zhang W, Soh J, Stastny V, Chen M, Sun H, Thu K, Rios JJ, Yang C, Marconett CN, Selamat SA, Laird-Offringa IA, Taguchi A, Hanash S, Shames D, Ma X, Zhang MQ, Lam WL, Gazdar AJournal of thoracic oncology : official publication of the International Association for the Study of Lung CancerCDKN2A/p16 inactivation mechanisms and their relationship to smoke exposure and molecular features in non-small-cell lung cancer. J Thorac Oncol. 2013 Nov; 8(11):1378-88.J Thorac Oncol2013-11-01T00:00:002013CDKN2A/p16 inactivation mechanisms and their relationship to smoke exposure and molecular features in non-small-cell lung cancer.24173314Hanash SM, Taguchi ACold Spring Harbor protocolsMouse to human blood-based cancer biomarker discovery strategies. Cold Spring Harb Protoc. 2014 Feb 01; 2014(2):144-9.Cold Spring Harb Protoc2014-02-01T00:00:002014Mouse to human blood-based cancer biomarker discovery strategies.24248694Sin DD, Tammemagi CM, Lam S, Barnett MJ, Duan X, Tam A, Auman H, Feng Z, Goodman GE, Hanash S, Taguchi AJournal of clinical oncology : official journal of the American Society of Clinical OncologyPro-surfactant protein B as a biomarker for lung cancer prediction. J Clin Oncol. 2013 Dec 20; 31(36):4536-43.J Clin Oncol2013-11-18T00:00:002013Pro-surfactant protein B as a biomarker for lung cancer prediction.Authorship 2629841Authorship 2632223Authorship 2637874Authorship 2641422Authorship 2641488Authorship 2642648Authorship 2643243Authorship 26553610Authorship 2657357Authorship 26614010Authorship 2665191Authorship 26659318Authorship 26668016Authorship 2667873Authorship 2668461Authorship 2670002Authorship 2675536Authorship 2681228Authorship 26824516Authorship 2688611Authorship 2698412Authorship 2699927Authorship 2702411Authorship 27049718Authorship 27075712Authorship 2711792Authorship 2714284Authorship 2722891Authorship 27230312056128Hailat N, Keim DR, Melhem RF, Zhu XX, Eckerskorn C, Brodeur GM, Reynolds CP, Seeger RC, Lottspeich F, Strahler JRThe Journal of clinical investigationHigh levels of p19/nm23 protein in neuroblastoma are associated with advanced stage disease and with N-myc gene amplification. J Clin Invest. 1991 Jul; 88(1):341-5.J Clin Invest1991-07-01T00:00:001991High levels of p19/nm23 protein in neuroblastoma are associated with advanced stage disease and with N-myc gene amplification.3328857Hanash SM, Chu EH, Kuick R, Skolnick M, Neel J, Strahler J, Pivirotto S, Niezgoda WProteinsDetection of human somatic cell structural gene mutations by two-dimensional electrophoresis. Proteins. 1987; 2(1):13-9.Proteins1987-01-01T00:00:001987Detection of human somatic cell structural gene mutations by two-dimensional electrophoresis.3417633Hanash SM, Strahler JR, Kuick R, Chu EH, Nichols DThe Journal of biological chemistryIdentification of a polypeptide associated with the malignant phenotype in acute leukemia. J Biol Chem. 1988 Sep 15; 263(26):12813-5.J Biol Chem1988-09-15T00:00:001988Identification of a polypeptide associated with the malignant phenotype in acute leukemia.3991732Hanash SM, Gagnon M, Seeger RC, Baier LProgress in clinical and biological researchAnalysis of neuroblastoma cell proteins using two-dimensional electrophoresis. Prog Clin Biol Res. 1985; 175:261-8.Prog Clin Biol Res1985-01-01T00:00:001985Analysis of neuroblastoma cell proteins using two-dimensional electrophoresis.6203403Rosenblum BB, Neel JV, Hanash SM, Joseph JL, Yew NAmerican journal of human geneticsIdentification of genetic variants in erythrocyte lysate by two-dimensional gel electrophoresis. Am J Hum Genet. 1984 May; 36(3):601-12.Am J Hum Genet1984-05-01T00:00:001984Identification of genetic variants in erythrocyte lysate by two-dimensional gel electrophoresis.7929811Haftel HM, Chang Y, Hinderer R, Hanash SM, Holoshitz JThe Journal of clinical investigationInduction of the autoantigen proliferating cell nuclear antigen in T lymphocytes by a mycobacterial antigen. J Clin Invest. 1994 Oct; 94(4):1365-72.J Clin Invest1994-10-01T00:00:001994Induction of the autoantigen proliferating cell nuclear antigen in T lymphocytes by a mycobacterial antigen.8878694Kuick R, Asakawa J, Neel JV, Kodaira M, Satoh C, Thoraval D, Gonzalez IL, Hanash SMGeneticsStudies of the inheritance of human ribosomal DNA variants detected in two-dimensional separations of genomic restriction fragments. Genetics. 1996 Sep; 144(1):307-16.Genetics1996-09-01T00:00:001996Studies of the inheritance of human ribosomal DNA variants detected in two-dimensional separations of genomic restriction fragments.9935176Ferbus D, Fl?chon A, Muleris M, Li Y, Hanash S, Terris B, Hammel P, Pibouin L, Dutrillaux B, Goubin GInternational journal of cancerAmplification and over-expression of OZF, a gene encoding a zinc finger protein, in human pancreatic carcinomas. Int J Cancer. 1999 Jan 29; 80(3):369-72.Int J Cancer1999-01-29T00:00:001999Amplification and over-expression of OZF, a gene encoding a zinc finger protein, in human pancreatic carcinomas.10344246Oh JM, Hanash SM, Teichroew DElectrophoresisMining protein data from two-dimensional gels: tools for systematic post-planned analyses. Electrophoresis. 1999 Apr-May; 20(4-5):766-74.Electrophoresis1999-04-01T00:00:001999Mining protein data from two-dimensional gels: tools for systematic post-planned analyses.10393947Zhu X, Deng C, Kuick R, Yung R, Lamb B, Neel JV, Richardson B, Hanash SProceedings of the National Academy of Sciences of the United States of AmericaAnalysis of human peripheral blood T cells and single-cell-derived T cell clones uncovers extensive clonal CpG island methylation heterogeneity throughout the genome. Proc Natl Acad Sci U S A. 1999 Jul 06; 96(14):8058-63.Proc Natl Acad Sci U S A1999-07-06T00:00:001999Analysis of human peripheral blood T cells and single-cell-derived T cell clones uncovers extensive clonal CpG island methylation heterogeneity throughout the genome.12234996Lin L, Miller CT, Contreras JI, Prescott MS, Dagenais SL, Wu R, Yee J, Orringer MB, Misek DE, Hanash SM, Glover TW, Beer DGCancer researchThe hepatocyte nuclear factor 3 alpha gene, HNF3alpha (FOXA1), on chromosome band 14q13 is amplified and overexpressed in esophageal and lung adenocarcinomas. Cancer Res. 2002 Sep 15; 62(18):5273-9.Cancer Res2002-09-15T00:00:002002The hepatocyte nuclear factor 3 alpha gene, HNF3alpha (FOXA1), on chromosome band 14q13 is amplified and overexpressed in esophageal and lung adenocarcinomas.12517955Mo R, Chen J, Han Y, Bueno-Cannizares C, Misek DE, Lescure PA, Hanash S, Yung RLJournal of immunology (Baltimore, Md. : 1950)T cell chemokine receptor expression in aging. J Immunol. 2003 Jan 15; 170(2):895-904.J Immunol2003-01-15T00:00:002003T cell chemokine receptor expression in aging.12687616Chen G, Gharib TG, Thomas DG, Huang CC, Misek DE, Kuick RD, Giordano TJ, Iannettoni MD, Orringer MB, Hanash SM, Beer DGProteomicsProteomic analysis of eIF-5A in lung adenocarcinomas. Proteomics. 2003 Apr; 3(4):496-504.Proteomics2003-04-01T00:00:002003Proteomic analysis of eIF-5A in lung adenocarcinomas.14573703Chen G, Gharib TG, Wang H, Huang CC, Kuick R, Thomas DG, Shedden KA, Misek DE, Taylor JM, Giordano TJ, Kardia SL, Iannettoni MD, Yee J, Hogg PJ, Orringer MB, Hanash SM, Beer DGProceedings of the National Academy of Sciences of the United States of AmericaProtein profiles associated with survival in lung adenocarcinoma. Proc Natl Acad Sci U S A. 2003 Nov 11; 100(23):13537-42.Proc Natl Acad Sci U S A2003-10-22T00:00:002003Protein profiles associated with survival in lung adenocarcinoma.14747694Hanash SMolecular & cellular proteomics : MCPHUPO initiatives relevant to clinical proteomics. Mol Cell Proteomics. 2004 Apr; 3(4):298-301.Mol Cell Proteomics2004-01-27T00:00:002004HUPO initiatives relevant to clinical proteomics.15542906Misek DE, Kuick R, Hanash SM, Logsdon CDMethods in molecular medicineOligonucleotide-directed microarray gene profiling of pancreatic adenocarcinoma. Methods Mol Med. 2005; 103:175-87.Methods Mol Med2005-01-01T00:00:002005Oligonucleotide-directed microarray gene profiling of pancreatic adenocarcinoma.16396501Rauch A, Bellew M, Eng J, Fitzgibbon M, Holzman T, Hussey P, Igra M, Maclean B, Lin CW, Detter A, Fang R, Faca V, Gafken P, Zhang H, Whiteaker J, Whitaker J, States D, Hanash S, Paulovich A, McIntosh MWJournal of proteome researchComputational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments. J Proteome Res. 2006 Jan; 5(1):112-21.J Proteome Res2006-01-01T00:00:002006Computational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments.17064703Song K, Hanash SGastroenterologyUnraveling the complex proteome for biomarker discovery in gastrointestinal and liver diseases. Gastroenterology. 2006 Nov; 131(5):1375-8.Gastroenterology2006-11-01T00:00:002006Unraveling the complex proteome for biomarker discovery in gastrointestinal and liver diseases.17200335Seliger B, Fedorushchenko A, Brenner W, Ackermann A, Atkins D, Hanash S, Lichtenfels RClinical cancer research : an official journal of the American Association for Cancer ResearchUbiquitin COOH-terminal hydrolase 1: a biomarker of renal cell carcinoma associated with enhanced tumor cell proliferation and migration. Clin Cancer Res. 2007 Jan 01; 13(1):27-37.Clin Cancer Res2007-01-01T00:00:002007Ubiquitin COOH-terminal hydrolase 1: a biomarker of renal cell carcinoma associated with enhanced tumor cell proliferation and migration.17924484Hanash SJournal of proteome researchIt takes a village to develop biomarkers. J Proteome Res. 2007 Sep; 6(9):3362.J Proteome Res2007-09-01T00:00:002007It takes a village to develop biomarkers.18432406Ehrlich M, Sanchez C, Shao C, Nishiyama R, Kehrl J, Kuick R, Kubota T, Hanash SMAutoimmunityICF, an immunodeficiency syndrome: DNA methyltransferase 3B involvement, chromosome anomalies, and gene dysregulation. Autoimmunity. 2008 May; 41(4):253-71.Autoimmunity2008-05-01T00:00:002008ICF, an immunodeficiency syndrome: DNA methyltransferase 3B involvement, chromosome anomalies, and gene dysregulation.19402886Katayama H, Paczesny S, Prentice R, Aragaki A, Faca VM, Pitteri SJ, Zhang Q, Wang H, Silva M, Kennedy J, Rossouw J, Jackson R, Hsia J, Chlebowski R, Manson J, Hanash SGenome medicineApplication of serum proteomics to the Women's Health Initiative conjugated equine estrogens trial reveals a multitude of effects relevant to clinical findings. Genome Med. 2009 Apr 29; 1(4):47.Genome Med2009-04-29T00:00:002009Application of serum proteomics to the Women's Health Initiative conjugated equine estrogens trial reveals a multitude of effects relevant to clinical findings.20534908Pitteri S, Hanash SDisease markersA systems approach to the proteomic identification of novel cancer biomarkers. Dis Markers. 2010; 28(4):233-9.Dis Markers2010-01-01T00:00:002010A systems approach to the proteomic identification of novel cancer biomarkers.21829587Fang Q, Kani K, Faca VM, Zhang W, Zhang Q, Jain A, Hanash S, Agus DB, McIntosh MW, Mallick PPloS oneImpact of protein stability, cellular localization, and abundance on proteomic detection of tumor-derived proteins in plasma. PLoS One. 2011; 6(7):e23090.PLoS One2011-07-29T00:00:002011Impact of protein stability, cellular localization, and abundance on proteomic detection of tumor-derived proteins in plasma.21907921Taguchi A, Politi K, Pitteri SJ, Lockwood WW, Fa?a VM, Kelly-Spratt K, Wong CH, Zhang Q, Chin A, Park KS, Goodman G, Gazdar AF, Sage J, Dinulescu DM, Kucherlapati R, Depinho RA, Kemp CJ, Varmus HE, Hanash SMCancer cellLung cancer signatures in plasma based on proteome profiling of mouse tumor models. Cancer Cell. 2011 Sep 13; 20(3):289-99.Cancer Cell2011-09-13T00:00:002011Lung cancer signatures in plasma based on proteome profiling of mouse tumor models.22157286Hanash S, Taguchi ACancer journal (Sudbury, Mass.)Application of proteomics to cancer early detection. Cancer J. 2011 Nov-Dec; 17(6):423-8.Cancer J2011-11-01T00:00:002011Application of proteomics to cancer early detection.22277732Ladd JJ, Busald T, Johnson MM, Zhang Q, Pitteri SJ, Wang H, Brenner DE, Lampe PD, Kucherlapati R, Feng Z, Prentice RL, Hanash SMCancer prevention research (Philadelphia, Pa.)Increased plasma levels of the APC-interacting protein MAPRE1, LRG1, and IGFBP2 preceding a diagnosis of colorectal cancer in women. Cancer Prev Res (Phila). 2012 Apr; 5(4):655-64.Cancer Prev Res (Phila)2012-01-25T00:00:002012Increased plasma levels of the APC-interacting protein MAPRE1, LRG1, and IGFBP2 preceding a diagnosis of colorectal cancer in women.23099557Taguchi A, Hanash SMClinical chemistryUnleashing the power of proteomics to develop blood-based cancer markers. Clin Chem. 2013 Jan; 59(1):119-26.Clin Chem2012-10-24T00:00:002012Unleashing the power of proteomics to develop blood-based cancer markers.23371026Wu SL, Taylor AD, Lu Q, Hanash SM, Im H, Snyder M, Hancock WSMolecular & cellular proteomics : MCPIdentification of potential glycan cancer markers with sialic acid attached to sialic acid and up-regulated fucosylated galactose structures in epidermal growth factor receptor secreted from A431 cell line. Mol Cell Proteomics. 2013 May; 12(5):1239-49.Mol Cell Proteomics2013-01-31T00:00:002013Identification of potential glycan cancer markers with sialic acid attached to sialic acid and up-regulated fucosylated galactose structures in epidermal growth factor receptor secreted from A431 cell line.Authorship 2727203Authorship 2728101Authorship 2730077Authorship 2730134Authorship 2730467Authorship 2734923Authorship 27391521Authorship 2742244Authorship 27498411Authorship 2754816Authorship 2756355Authorship 2756822Authorship 2757871Authorship 2758365Authorship 2760422Authorship 2760933Authorship 2763499Authorship 2764361Authorship 27696012Authorship 2770951Authorship 27717911Authorship 2772293Authorship 2772663Authorship 2773323Authorship 2777261Authorship 277806121401087Gratiot-Deans J, Keim D, Strahler JR, Turka LA, Hanash SThe Journal of clinical investigationDifferential expression of Op18 phosphoprotein during human thymocyte maturation. J Clin Invest. 1992 Oct; 90(4):1576-81.J Clin Invest1992-10-01T00:00:001992Differential expression of Op18 phosphoprotein during human thymocyte maturation.1500712Strahler JR, Hailat N, Lamb BJ, Rogers KP, Underhill JA, Melhem RF, Keim DR, Zhu X, Kuick RD, Fox DAJournal of immunology (Baltimore, Md. : 1950)Activation of resting peripheral blood lymphocytes through the T cell receptor induces rapid phosphorylation of Op18. J Immunol. 1992 Aug 15; 149(4):1191-8.J Immunol1992-08-15T00:00:001992Activation of resting peripheral blood lymphocytes through the T cell receptor induces rapid phosphorylation of Op18.1930203Melhem RF, Strahler JR, Hailat N, Zhu XX, Hanash SMBiochemical and biophysical research communicationsInvolvement of OP18 in cell proliferation. Biochem Biophys Res Commun. 1991 Sep 30; 179(3):1649-55.Biochem Biophys Res Commun1991-09-30T00:00:001991Involvement of OP18 in cell proliferation.2457378Richardson B, Cornacchia E, Golbus J, Maybaum J, Strahler J, Hanash SArthritis and rheumatismN-acetylprocainamide is a less potent inducer of T cell autoreactivity than procainamide. Arthritis Rheum. 1988 Aug; 31(8):995-9.Arthritis Rheum1988-08-01T00:00:001988N-acetylprocainamide is a less potent inducer of T cell autoreactivity than procainamide.2917188Hanash SM, Kuick R, Strahler J, Richardson B, Reaman G, Stoolman L, Hanson C, Nichols D, Tueche HJBloodIdentification of a cellular polypeptide that distinguishes between acute lymphoblastic leukemia in infants and in older children. Blood. 1989 Feb; 73(2):527-32.Blood1989-02-01T00:00:001989Identification of a cellular polypeptide that distinguishes between acute lymphoblastic leukemia in infants and in older children.6576372Rosenblum BB, Neel JV, Hanash SMProceedings of the National Academy of Sciences of the United States of AmericaTwo-dimensional electrophoresis of plasma polypeptides reveals "high" heterozygosity indices. Proc Natl Acad Sci U S A. 1983 Aug; 80(16):5002-6.Proc Natl Acad Sci U S A1983-08-01T00:00:001983Two-dimensional electrophoresis of plasma polypeptides reveals "high" heterozygosity indices.7125213Amanullah A, Hanash S, Bunnell K, Strahler J, Rucknagel DL, Ferruci SJAnalytical biochemistryCord blood screening for hemoglobin disorders by high-performance liquid chromatography. Anal Biochem. 1982 Jul 01; 123(2):402-7.Anal Biochem1982-07-01T00:00:001982Cord blood screening for hemoglobin disorders by high-performance liquid chromatography.7691157Hanash SM, Beretta L, Barcroft CL, Sheldon S, Glover TW, Ungar D, Sonenberg NGenes, chromosomes & cancerMapping of the gene for interferon-inducible dsRNA-dependent protein kinase to chromosome region 2p21-22: a site of rearrangements in myeloproliferative disorders. Genes Chromosomes Cancer. 1993 Sep; 8(1):34-7.Genes Chromosomes Cancer1993-09-01T00:00:001993Mapping of the gene for interferon-inducible dsRNA-dependent protein kinase to chromosome region 2p21-22: a site of rearrangements in myeloproliferative disorders.8389461Strahler JR, Zhu XX, Hora N, Wang YK, Andrews PC, Roseman NA, Neel JV, Turka L, Hanash SMProceedings of the National Academy of Sciences of the United States of AmericaMaturation stage and proliferation-dependent expression of dUTPase in human T cells. Proc Natl Acad Sci U S A. 1993 Jun 01; 90(11):4991-5.Proc Natl Acad Sci U S A1993-06-01T00:00:001993Maturation stage and proliferation-dependent expression of dUTPase in human T cells.10380763Schickle H, Lamb BJ, Hanash SMElectrophoresisHorizontal two-dimensional electrophoresis of complex DNA samples using precast gel systems. Electrophoresis. 1999 Jun; 20(6):1233-8.Electrophoresis1999-06-01T00:00:001999Horizontal two-dimensional electrophoresis of complex DNA samples using precast gel systems.11280781Rickman DS, Tyagi R, Zhu XX, Bobek MP, Song S, Blaivas M, Misek DE, Israel MA, Kurnit DM, Ross DA, Kish PE, Hanash SMCancer researchThe gene for the axonal cell adhesion molecule TAX-1 is amplified and aberrantly expressed in malignant gliomas. Cancer Res. 2001 Mar 01; 61(5):2162-8.Cancer Res2001-03-01T00:00:002001The gene for the axonal cell adhesion molecule TAX-1 is amplified and aberrantly expressed in malignant gliomas.11705844Le Naour F, Misek DE, Krause MC, Deneux L, Giordano TJ, Scholl S, Hanash SMClinical cancer research : an official journal of the American Association for Cancer ResearchProteomics-based identification of RS/DJ-1 as a novel circulating tumor antigen in breast cancer. Clin Cancer Res. 2001 Nov; 7(11):3328-35.Clin Cancer Res2001-11-01T00:00:002001Proteomics-based identification of RS/DJ-1 as a novel circulating tumor antigen in breast cancer.11721639Madoz-G?rpide J, Wang H, Misek DE, Brichory F, Hanash SMProteomicsProtein based microarrays: a tool for probing the proteome of cancer cells and tissues. Proteomics. 2001 Oct; 1(10):1279-87.Proteomics2001-10-01T00:00:002001Protein based microarrays: a tool for probing the proteome of cancer cells and tissues.11790896Hanash S, Brichory F, Beer DDisease markersA proteomic approach to the identification of lung cancer markers. Dis Markers. 2001; 17(4):295-300.Dis Markers2001-01-01T00:00:002001A proteomic approach to the identification of lung cancer markers.12096119Le Naour F, Brichory F, Misek DE, Br?chot C, Hanash SM, Beretta LMolecular & cellular proteomics : MCPA distinct repertoire of autoantibodies in hepatocellular carcinoma identified by proteomic analysis. Mol Cell Proteomics. 2002 Mar; 1(3):197-203.Mol Cell Proteomics2002-03-01T00:00:002002A distinct repertoire of autoantibodies in hepatocellular carcinoma identified by proteomic analysis.12169681Hanash S, Celis JEMolecular & cellular proteomics : MCPThe Human Proteome Organization: a mission to advance proteome knowledge. Mol Cell Proteomics. 2002 Jun; 1(6):413-4.Mol Cell Proteomics2002-06-01T00:00:002002The Human Proteome Organization: a mission to advance proteome knowledge.12625784Naour FL, Brichory F, Beretta L, Hanash SMTechnology in cancer research & treatmentIdentification of tumor-associated antigens using proteomics. Technol Cancer Res Treat. 2002 Aug; 1(4):257-62.Technol Cancer Res Treat2002-08-01T00:00:002002Identification of tumor-associated antigens using proteomics.15038760Asakawa J, Kuick R, Kodaira M, Nakamura N, Katayama H, Pierce D, Funamoto S, Preston D, Satoh C, Neel JV, Hanash SRadiation researchA genome scanning approach to assess the genetic effects of radiation in mice and humans. Radiat Res. 2004 Apr; 161(4):380-90.Radiat Res2004-04-01T00:00:002004A genome scanning approach to assess the genetic effects of radiation in mice and humans.15286743Hanash SNature reviews. CancerIntegrated global profiling of cancer. Nat Rev Cancer. 2004 08; 4(8):638-44.Nat Rev Cancer2004-08-01T00:00:002004Integrated global profiling of cancer.15584879Misek DE, Imafuku Y, Hanash SMPharmacogenomicsApplication of proteomic technologies to tumor analysis. Pharmacogenomics. 2004 Dec; 5(8):1129-37.Pharmacogenomics2004-12-01T00:00:002004Application of proteomic technologies to tumor analysis.16804415Kubisch CH, Gukovsky I, Lugea A, Pandol SJ, Kuick R, Misek DE, Hanash SM, Logsdon CDPancreasLong-term ethanol consumption alters pancreatic gene expression in rats: a possible connection to pancreatic injury. Pancreas. 2006 Jul; 33(1):68-76.Pancreas2006-07-01T00:00:002006Long-term ethanol consumption alters pancreatic gene expression in rats: a possible connection to pancreatic injury.17907570Faca V, Krasnoselsky A, Hanash SBioTechniquesInnovative proteomic approaches for cancer biomarker discovery. Biotechniques. 2007 Sep; 43(3):279, 281-3, 285.Biotechniques2007-09-01T00:00:002007Innovative proteomic approaches for cancer biomarker discovery.18560578Fa?a VM, Ventura AP, Fitzgibbon MP, Pereira-Fa?a SR, Pitteri SJ, Green AE, Ireton RC, Zhang Q, Wang H, O'Briant KC, Drescher CW, Schummer M, McIntosh MW, Knudsen BS, Hanash SMPloS oneProteomic analysis of ovarian cancer cells reveals dynamic processes of protein secretion and shedding of extra-cellular domains. PLoS One. 2008 Jun 18; 3(6):e2425.PLoS One2008-06-18T00:00:002008Proteomic analysis of ovarian cancer cells reveals dynamic processes of protein secretion and shedding of extra-cellular domains.20371463Paczesny S, Braun TM, Levine JE, Hogan J, Crawford J, Coffing B, Olsen S, Choi SW, Wang H, Faca V, Pitteri S, Zhang Q, Chin A, Kitko C, Mineishi S, Yanik G, Peres E, Hanauer D, Wang Y, Reddy P, Hanash S, Ferrara JLScience translational medicineElafin is a biomarker of graft-versus-host disease of the skin. Sci Transl Med. 2010 Jan 06; 2(13):13ra2.Sci Transl Med2010-01-06T00:00:002010Elafin is a biomarker of graft-versus-host disease of the skin.21513341Zeng Z, Hincapie M, Pitteri SJ, Hanash S, Schalkwijk J, Hogan JM, Wang H, Hancock WSAnalytical chemistryA proteomics platform combining depletion, multi-lectin affinity chromatography (M-LAC), and isoelectric focusing to study the breast cancer proteome. Anal Chem. 2011 Jun 15; 83(12):4845-54.Anal Chem2011-05-23T00:00:002011A proteomics platform combining depletion, multi-lectin affinity chromatography (M-LAC), and isoelectric focusing to study the breast cancer proteome.23401414Chao T, Ladd JJ, Qiu J, Johnson MM, Israel R, Chin A, Wang H, Prentice RL, Feng Z, Disis ML, Hanash SProteomics. Clinical applicationsProteomic profiling of the autoimmune response to breast cancer antigens uncovers a suppressive effect of hormone therapy. Proteomics Clin Appl. 2013 Jun; 7(5-6):327-36.Proteomics Clin Appl2013-05-10T00:00:002013Proteomic profiling of the autoimmune response to breast cancer antigens uncovers a suppressive effect of hormone therapy.Authorship 27861013Authorship 279534123948498Kuick R, Boerwinkle E, Hanash SM, Sing CFComputers and biomedical research, an international journalA statistical analysis of spot variation using the two-dimensional polyacrylamide gel electrophoresis. Comput Biomed Res. 1986 Feb; 19(1):90-102.Comput Biomed Res1986-02-01T00:00:001986A statistical analysis of spot variation using the two-dimensional polyacrylamide gel electrophoresis.3631131Boerwinkle E, Visvikis S, Welsh D, Steinmetz J, Hanash SM, Sing CFAmerican journal of medical geneticsThe use of measured genotype information in the analysis of quantitative phenotypes in man. II. The role of the apolipoprotein E polymorphism in determining levels, variability, and covariability of cholesterol, betalipoprotein, and triglycerides in a sample of unrelated individuals. Am J Med Genet. 1987 Jul; 27(3):567-82.Am J Med Genet1987-07-01T00:00:001987The use of measured genotype information in the analysis of quantitative phenotypes in man. II. The role of the apolipoprotein E polymorphism in determining levels, variability, and covariability of cholesterol, betalipoprotein, and triglycerides in a sample of unrelated individuals.26631572Pankova D, Chen Y, Terajima M, Schliekelman MJ, Baird BN, Fahrenholtz M, Sun L, Gill BJ, Vadakkan TJ, Kim MP, Ahn YH, Roybal JD, Liu X, Parra Cuentas ER, Rodriguez J, Wistuba II, Creighton CJ, Gibbons DL, Hicks JM, Dickinson ME, West JL, Grande-Allen KJ, Hanash SM, Yamauchi M, Kurie JMMolecular cancer research : MCRCancer-Associated Fibroblasts Induce a Collagen Cross-link Switch in Tumor Stroma. Mol Cancer Res. 2016 Mar; 14(3):287-95.Mol Cancer Res2015-12-02T00:00:002015Cancer-Associated Fibroblasts Induce a Collagen Cross-link Switch in Tumor Stroma.Authorship 2836282Authorship 2854508Authorship 2871856Authorship 2884549Authorship 2890201Authorship 29013516Authorship 29021312Authorship 2917773Authorship 2923166Authorship 29464622Authorship 2948412Authorship 29570112Authorship 2960683Authorship 2967209Authorship 2974172Authorship 29784417Authorship 3019704Authorship 30513011Authorship 30555114Authorship 3077054Authorship 312214103733954Cossu G, Manca M, Strahler JR, Hanash SM, Righetti PGJournal of chromatographyDetection of electrophoretically silent mutations by immobilized pH gradients. J Chromatogr. 1986 Jun 27; 361:223-9.J Chromatogr1986-06-27T00:00:001986Detection of electrophoretically silent mutations by immobilized pH gradients.11464910Wimmer K, Zhu XX, Lamb BJ, Kuick R, Ambros P, Kovar H, Thoraval D, Elkahloun A, Meltzer P, Hanash SMMedical and pediatric oncologyTwo-dimensional DNA electrophoresis identifies novel CpG islands frequently coamplified with MYCN in neuroblastoma. Med Pediatr Oncol. 2001 Jan; 36(1):75-9.Med Pediatr Oncol2001-01-01T00:00:002001Two-dimensional DNA electrophoresis identifies novel CpG islands frequently coamplified with MYCN in neuroblastoma.20034393Pitteri SJ, Hanash SM, Aragaki A, Amon LM, Chen L, Busald Buson T, Paczesny S, Katayama H, Wang H, Johnson MM, Zhang Q, McIntosh M, Wang P, Kooperberg C, Rossouw JE, Jackson RD, Manson JE, Hsia J, Liu S, Martin L, Prentice RLGenome medicinePostmenopausal estrogen and progestin effects on the serum proteome. Genome Med. 2009 Dec 24; 1(12):121.Genome Med2009-12-24T00:00:002009Postmenopausal estrogen and progestin effects on the serum proteome.22110949Zhang Q, Taguchi A, Schliekelman M, Wong CH, Chin A, Kuick R, Misek DE, Hanash SInternational journal of proteomicsComprehensive proteomic profiling of aldehyde dehydrogenases in lung adenocarcinoma cell lines. Int J Proteomics. 2011; 2011:145010.Int J Proteomics2011-10-29T00:00:002011Comprehensive proteomic profiling of aldehyde dehydrogenases in lung adenocarcinoma cell lines.23640812Ruhaak LR, Nguyen UT, Stroble C, Taylor SL, Taguchi A, Hanash SM, Lebrilla CB, Kim K, Miyamoto SProteomics. Clinical applicationsEnrichment strategies in glycomics-based lung cancer biomarker development. Proteomics Clin Appl. 2013 Oct; 7(9-10):664-76.Proteomics Clin Appl2013-08-06T00:00:002013Enrichment strategies in glycomics-based lung cancer biomarker development.24373343Prentice RL, Zhao S, Johnson M, Aragaki A, Hsia J, Jackson RD, Rossouw JE, Manson JE, Hanash SMGenome medicineProteomic risk markers for coronary heart disease and stroke: validation and mediation of randomized trial hormone therapy effects on these diseases. Genome Med. 2013; 5(12):112.Genome Med2013-12-27T00:00:002013Proteomic risk markers for coronary heart disease and stroke: validation and mediation of randomized trial hormone therapy effects on these diseases.24713112Hanash S, Schliekelman MGenome medicineProteomic profiling of the tumor microenvironment: recent insights and the search for biomarkers. Genome Med. 2014 Feb 27; 6(2):12.Genome Med2014-02-27T00:00:002014Proteomic profiling of the tumor microenvironment: recent insights and the search for biomarkers.24886063Mao J, Ladd J, Gad E, Rastetter L, Johnson MM, Marzbani E, Childs JS, Lu H, Dang Y, Broussard E, Stanton SE, Hanash SM, Disis MLJournal of translational medicineMining the pre-diagnostic antibody repertoire of TgMMTV-neu mice to identify autoantibodies useful for the early detection of human breast cancer. J Transl Med. 2014 May 10; 12:121.J Transl Med2014-05-10T00:00:002014Mining the pre-diagnostic antibody repertoire of TgMMTV-neu mice to identify autoantibodies useful for the early detection of human breast cancer.24970476Taguchi A, Taylor AD, Rodriguez J, Celiktas M, Liu H, Ma X, Zhang Q, Wong CH, Chin A, Girard L, Behrens C, Lam WL, Lam S, Minna JD, Wistuba II, Gazdar AF, Hanash SMCancer researchA search for novel cancer/testis antigens in lung cancer identifies VCX/Y genes, expanding the repertoire of potential immunotherapeutic targets. Cancer Res. 2014 Sep 01; 74(17):4694-705.Cancer Res2014-06-26T00:00:002014A search for novel cancer/testis antigens in lung cancer identifies VCX/Y genes, expanding the repertoire of potential immunotherapeutic targets.25246552Lu M, Huang B, Hanash SM, Onuchic JN, Ben-Jacob EProceedings of the National Academy of Sciences of the United States of AmericaModeling putative therapeutic implications of exosome exchange between tumor and immune cells. Proc Natl Acad Sci U S A. 2014 Oct 07; 111(40):E4165-74.Proc Natl Acad Sci U S A2014-09-22T00:00:002014Modeling putative therapeutic implications of exosome exchange between tumor and immune cells.25331784Taguchi A, Delgado O, Celiktas M, Katayama H, Wang H, Gazdar AF, Hanash SMProteomicsProteomic signatures associated with p53 mutational status in lung adenocarcinoma. Proteomics. 2014 Dec; 14(23-24):2750-9.Proteomics2014-11-20T00:00:002014Proteomic signatures associated with p53 mutational status in lung adenocarcinoma.25744723Schliekelman MJ, Taguchi A, Zhu J, Dai X, Rodriguez J, Celiktas M, Zhang Q, Chin A, Wong CH, Wang H, McFerrin L, Selamat SA, Yang C, Kroh EM, Garg KS, Behrens C, Gazdar AF, Laird-Offringa IA, Tewari M, Wistuba II, Thiery JP, Hanash SMCancer researchMolecular portraits of epithelial, mesenchymal, and hybrid States in lung adenocarcinoma and their relevance to survival. Cancer Res. 2015 May 01; 75(9):1789-800.Cancer Res2015-03-05T00:00:002015Molecular portraits of epithelial, mesenchymal, and hybrid States in lung adenocarcinoma and their relevance to survival.25792606Mischak H, Critselis E, Hanash S, Gallagher WM, Vlahou A, Ioannidis JPAmerican journal of epidemiologyEpidemiologic design and analysis for proteomic studies: a primer on -omic technologies. Am J Epidemiol. 2015 May 01; 181(9):635-47.Am J Epidemiol2015-03-19T00:00:002015Epidemiologic design and analysis for proteomic studies: a primer on -omic technologies.25794949Wang H, Hanash SMethods (San Diego, Calif.)Mass spectrometry based proteomics for absolute quantification of proteins from tumor cells. Methods. 2015 Jun 15; 81:34-40.Methods2015-03-17T00:00:002015Mass spectrometry based proteomics for absolute quantification of proteins from tumor cells.25859693Miyamoto S, Taylor SL, Barupal DK, Taguchi A, Wohlgemuth G, Wikoff WR, Yoneda KY, Gandara DR, Hanash SM, Kim K, Fiehn OMetabolitesSystemic Metabolomic Changes in Blood Samples of Lung Cancer Patients Identified by Gas Chromatography Time-of-Flight Mass Spectrometry. Metabolites. 2015 Apr 09; 5(2):192-210.Metabolites2015-04-09T00:00:002015Systemic Metabolomic Changes in Blood Samples of Lung Cancer Patients Identified by Gas Chromatography Time-of-Flight Mass Spectrometry.26025324Capello M, Lee M, Wang H, Babel I, Katz MH, Fleming JB, Maitra A, Wang H, Tian W, Taguchi A, Hanash SMJournal of the National Cancer InstituteCarboxylesterase 2 as a Determinant of Response to Irinotecan and Neoadjuvant FOLFIRINOX Therapy in Pancreatic Ductal Adenocarcinoma. J Natl Cancer Inst. 2015 Aug; 107(8).J Natl Cancer Inst2015-05-29T00:00:002015Carboxylesterase 2 as a Determinant of Response to Irinotecan and Neoadjuvant FOLFIRINOX Therapy in Pancreatic Ductal Adenocarcinoma.26088128Katayama H, Boldt C, Ladd JJ, Johnson MM, Chao T, Capello M, Suo J, Mao J, Manson JE, Prentice R, Esteva F, Wang H, Disis ML, Hanash SCancer researchAn Autoimmune Response Signature Associated with the Development of Triple-Negative Breast Cancer Reflects Disease Pathogenesis. Cancer Res. 2015 Aug 15; 75(16):3246-54.Cancer Res2015-06-18T00:00:002015An Autoimmune Response Signature Associated with the Development of Triple-Negative Breast Cancer Reflects Disease Pathogenesis.26172478Akil A, Zhang Q, Mumaw CL, Raiker N, Yu J, Velez de Mendizabal N, Haneline LS, Robertson KA, Skiles J, Diaz-Ricart M, Carreras E, Renbarger J, Hanash S, Bies RR, Paczesny SBiology of blood and marrow transplantation : journal of the American Society for Blood and Marrow TransplantationBiomarkers for Diagnosis and Prognosis of Sinusoidal Obstruction Syndrome after Hematopoietic Cell Transplantation. Biol Blood Marrow Transplant. 2015 Oct; 21(10):1739-45.Biol Blood Marrow Transplant2015-07-11T00:00:002015Biomarkers for Diagnosis and Prognosis of Sinusoidal Obstruction Syndrome after Hematopoietic Cell Transplantation.26282655Wikoff WR, Hanash S, DeFelice B, Miyamoto S, Barnett M, Zhao Y, Goodman G, Feng Z, Gandara D, Fiehn O, Taguchi AJournal of clinical oncology : official journal of the American Society of Clinical OncologyDiacetylspermine Is a Novel Prediagnostic Serum Biomarker for Non-Small-Cell Lung Cancer and Has Additive Performance With Pro-Surfactant Protein B. J Clin Oncol. 2015 Nov 20; 33(33):3880-6.J Clin Oncol2015-08-17T00:00:002015Diacetylspermine Is a Novel Prediagnostic Serum Biomarker for Non-Small-Cell Lung Cancer and Has Additive Performance With Pro-Surfactant Protein B.26342024Taguchi A, Rho JH, Yan Q, Zhang Y, Zhao Y, Xu H, Tripathi SC, Wang H, Brenner DE, Kucherlapati M, Kucherlapati R, Boutin AT, Wang YA, DePinho RA, Feng Z, Lampe PD, Hanash SMCancer prevention research (Philadelphia, Pa.)MAPRE1 as a plasma biomarker for early-stage colorectal cancer and adenomas. Cancer Prev Res (Phila). 2015 Nov; 8(11):1112-9.Cancer Prev Res (Phila)2015-09-04T00:00:002015MAPRE1 as a plasma biomarker for early-stage colorectal cancer and adenomas.26553793Annesley T, Diamandis E, Bachmann L, Hanash S, Hart B, Javahery R, Singh R, Smith RClinical chemistryA Spectrum of Views on Clinical Mass Spectrometry. Clin Chem. 2016 Jan; 62(1):30-6.Clin Chem2015-11-09T00:00:002015A Spectrum of Views on Clinical Mass Spectrometry.11782476Li JY, Lescure PA, Misek DE, Lai YM, Chai BX, Kuick R, Thompson RC, Demo RM, Kurnit DM, Michailidis G, Hanash SM, Gantz IThe Journal of biological chemistryFood deprivation-induced expression of minoxidil sulfotransferase in the hypothalamus uncovered by microarray analysis. J Biol Chem. 2002 Mar 15; 277(11):9069-76.J Biol Chem2002-01-08T00:00:002002Food deprivation-induced expression of minoxidil sulfotransferase in the hypothalamus uncovered by microarray analysis.15113102Qiu J, Madoz-Gurpide J, Misek DE, Kuick R, Brenner DE, Michailidis G, Haab BB, Omenn GS, Hanash SJournal of proteome researchDevelopment of natural protein microarrays for diagnosing cancer based on an antibody response to tumor antigens. J Proteome Res. 2004 Mar-Apr; 3(2):261-7.J Proteome Res2004-03-01T00:00:002004Development of natural protein microarrays for diagnosing cancer based on an antibody response to tumor antigens.74Professor10Assistant Professor16104058Ping P, Vondriska TM, Creighton CJ, Gandhi TK, Yang Z, Menon R, Kwon MS, Cho SY, Drwal G, Kellmann M, Peri S, Suresh S, Gronborg M, Molina H, Chaerkady R, Rekha B, Shet AS, Gerszten RE, Wu H, Raftery M, Wasinger V, Schulz-Knappe P, Hanash SM, Paik YK, Hancock WS, States DJ, Omenn GS, Pandey AProteomicsA functional annotation of subproteomes in human plasma. Proteomics. 2005 Aug; 5(13):3506-19.Proteomics2005-08-01T00:00:002005A functional annotation of subproteomes in human plasma.12954092Creighton C, Hanash SIn silico biologyExpression of matrix metalloproteinase 9 (MMP-9/gelatinase B) in adenocarcinomas strongly correlated with expression of immune response genes. In Silico Biol. 2003; 3(3):301-11.In Silico Biol2003-01-01T00:00:002003Expression of matrix metalloproteinase 9 (MMP-9/gelatinase B) in adenocarcinomas strongly correlated with expression of immune response genes.26813970Ruhaak LR, Stroble C, Dai J, Barnett M, Taguchi A, Goodman GE, Miyamoto S, Gandara D, Feng Z, Lebrilla CB, Hanash SCancer prevention research (Philadelphia, Pa.)Serum Glycans as Risk Markers for Non-Small Cell Lung Cancer. Cancer Prev Res (Phila). 2016 Apr; 9(4):317-23.Cancer Prev Res (Phila)2016-01-26T00:00:002016Serum Glycans as Risk Markers for Non-Small Cell Lung Cancer.26853146Redis RS, Vela LE, Lu W, Ferreira de Oliveira J, Ivan C, Rodriguez-Aguayo C, Adamoski D, Pasculli B, Taguchi A, Chen Y, Fernandez AF, Valledor L, Van Roosbroeck K, Chang S, Shah M, Kinnebrew G, Han L, Atlasi Y, Cheung LH, Huang GY, Monroig P, Ramirez MS, Catela Ivkovic T, Van L, Ling H, Gaf? R, Kapitanovic S, Lanza G, Bankson JA, Huang P, Lai SY, Bast RC, Rosenblum MG, Radovich M, Ivan M, Bartholomeusz G, Liang H, Fraga MF, Widger WR, Hanash S, Berindan-Neagoe I, Lopez-Berestein G, Ambrosio ALB, Gomes Dias SM, Calin GAMolecular cellAllele-Specific Reprogramming of Cancer Metabolism by the Long Non-coding RNA CCAT2. Mol Cell. 2016 Feb 18; 61(4):520-534.Mol Cell2016-02-04T00:00:002016Allele-Specific Reprogramming of Cancer Metabolism by the Long Non-coding RNA CCAT2.27382363Zhang C, Suo J, Katayama H, Wei Y, Garcia-Manero G, Hanash SClinical proteomicsQuantitative proteomic analysis of histone modifications in decitabine sensitive and resistant leukemia cell lines. Clin Proteomics. 2016; 13:14.Clin Proteomics2016-07-05T00:00:002016Quantitative proteomic analysis of histone modifications in decitabine sensitive and resistant leukemia cell lines.12844362Creighton C, Kuick R, Misek DE, Rickman DS, Brichory FM, Rouillard JM, Omenn GS, Hanash SGenome biologyProfiling of pathway-specific changes in gene expression following growth of human cancer cell lines transplanted into mice. Genome Biol. 2003; 4(7):R46.Genome Biol2003-06-23T00:00:002003Profiling of pathway-specific changes in gene expression following growth of human cancer cell lines transplanted into mice.14597962Hanash S, Creighton CThe pharmacogenomics journalMaking sense of microarray data to classify cancer. Pharmacogenomics J. 2003; 3(6):308-11.Pharmacogenomics J2003-01-01T00:00:002003Making sense of microarray data to classify cancer.15798092Creighton CJ, Bromberg-White JL, Misek DE, Monsma DJ, Brichory F, Kuick R, Giordano TJ, Gao W, Omenn GS, Webb CP, Hanash SMMolecular cancer research : MCRAnalysis of tumor-host interactions by gene expression profiling of lung adenocarcinoma xenografts identifies genes involved in tumor formation. Mol Cancer Res. 2005 Mar; 3(3):119-29.Mol Cancer Res2005-03-01T00:00:002005Analysis of tumor-host interactions by gene expression profiling of lung adenocarcinoma xenografts identifies genes involved in tumor formation.Authorship 3739303723785517Baird BN, Schliekelman MJ, Ahn YH, Chen Y, Roybal JD, Gill BJ, Mishra DK, Erez B, O'Reilly M, Yang Y, Patel M, Liu X, Thilaganathan N, Larina IV, Dickinson ME, West JL, Gibbons DL, Liu DD, Kim MP, Hicks JM, Wistuba II, Hanash SM, Kurie JMPloS oneFibulin-2 is a driver of malignant progression in lung adenocarcinoma. PLoS One. 2013; 8(6):e67054.PLoS One2013-06-10T00:00:002013Fibulin-2 is a driver of malignant progression in lung adenocarcinoma.18812437Creighton CJ, Nagaraja AK, Hanash SM, Matzuk MM, Gunaratne PHRNA (New York, N.Y.)A bioinformatics tool for linking gene expression profiling results with public databases of microRNA target predictions. RNA. 2008 Nov; 14(11):2290-6.RNA2008-09-23T00:00:002008A bioinformatics tool for linking gene expression profiling results with public databases of microRNA target predictions.27803159Chen Y, Guo H, Terajima M, Banerjee P, Liu X, Yu J, Momin AA, Katayama H, Hanash SM, Burns AR, Fields GB, Yamauchi M, Kurie JMThe Journal of biological chemistryLysyl Hydroxylase 2 Is Secreted by Tumor Cells and Can Modify Collagen in the Extracellular Space. J Biol Chem. 2016 Dec 09; 291(50):25799-25808.J Biol Chem2016-11-01T00:00:002016Lysyl Hydroxylase 2 Is Secreted by Tumor Cells and Can Modify Collagen in the Extracellular Space.21987723Schliekelman MJ, Gibbons DL, Faca VM, Creighton CJ, Rizvi ZH, Zhang Q, Wong CH, Wang H, Ungewiss C, Ahn YH, Shin DH, Kurie JM, Hanash SMCancer researchTargets of the tumor suppressor miR-200 in regulation of the epithelial-mesenchymal transition in cancer. Cancer Res. 2011 Dec 15; 71(24):7670-82.Cancer Res2011-10-10T00:00:002011Targets of the tumor suppressor miR-200 in regulation of the epithelial-mesenchymal transition in cancer.Authorship 842207Authorship 842404Authorship 843848Authorship 843998Authorship 844138Authorship 844312Authorship 844776Authorship 845306Authorship 845668Authorship 846712Authorship 846901Authorship 847790Authorship 849316Authorship 849327Authorship 849387Authorship 849557Authorship 849597Authorship 850011Authorship 850475Authorship 850478Authorship 850945Authorship 852529Authorship 853279Authorship 853685Authorship 854262Authorship 854700Authorship 854721Authorship 855343Authorship 855374Authorship 855456Authorship 856061Authorship 856862Authorship 857159Authorship 857799Authorship 857847Authorship 858035Authorship 858707Authorship 858714Authorship 859121Authorship 859474Authorship 859697Authorship 859698Authorship 860366Authorship 860623Authorship 861085Authorship 862389Authorship 862672Authorship 863892Authorship 864139Authorship 865045Authorship 866575Authorship 867184Authorship 867811Leukemia and LymphomaProliferating cell nuclear antigen. Leukemia and Lymphoma. 6:459-468.Proliferating cell nuclear antigenFederation ProceedingsDefective immunoregulatory functions of leukemic L lymphocytes. Federation Proceedings. 43.Defective immunoregulatory functions of leukemic L lymphocytesClinical Applications of Proteomics. 225-241.Clinical Applications of ProteomicsElectrophoresisElectrophoresis. 8:165-173.ElectrophoresisOncotargetStability of the hybrid epithelial/mesenchymal phenotype. Oncotarget. 7:27067-27084.Stability of the hybrid epithelial/mesenchymal phenotypeGenome MedicineProteomic profiling of the tumor microenvironment. Genome Medicine. 6.Proteomic profiling of the tumor microenvironmentNature Reviews Drug DiscoveryIntegrated global profiling of cancer. Nature Reviews Drug Discovery. 4:9-15.Integrated global profiling of cancerBiology of Blood and Marrow TransplantationBiomarkers for Diagnosis and Prognosis of Sinusoidal Obstruction Syndrome after Hematopoietic Cell Transplantation. 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Gastroenterology. 2021 03; 160(4):1373-1383.e6.Gastroenterology2020-12-14T00:00:002020Lead-Time Trajectory of CA19-9 as an Anchor Marker for Pancreatic Cancer Early Detection.33334899Hao D, He S, Harada K, Pizzi MP, Lu Y, Guan P, Chen L, Wang R, Zhang S, Sewastjanow-Silva M, Abdelhakeem A, Shanbhag N, Bhutani M, Han G, Lee JH, Zhao S, Weston B, Blum Murphy M, Waters R, Estrella JS, Roy-Chowdhuri S, Gan Q, Lee JS, Peng G, Hanash SM, Calin GA, Song X, Zhang J, Song S, Wang L, Ajani JAGutIntegrated genomic profiling and modelling for risk stratification in patients with advanced oesophagogastric adenocarcinoma. 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Stat Med. 2021 03 30; 40(7):1767-1789.Stat Med2021-02-02T00:00:002021The length of the receiver operating characteristic curve and the two cutoff Youden index within a robust framework for discovery, evaluation, and cutoff estimation in biomarker studies involving improper receiver operating characteristic curves.Authorship 10128591433671595Fahrmann JF, Irajizad E, Kobayashi M, Vykoukal J, Dennison JB, Murage E, Wu R, Long JP, Do KA, Celestino J, Lu KH, Lu Z, Bast RC, Hanash SCancersA MYC-Driven Plasma Polyamine Signature for Early Detection of Ovarian Cancer. Cancers (Basel). 2021 Feb 22; 13(4).Cancers (Basel)2021-02-22T00:00:002021A MYC-Driven Plasma Polyamine Signature for Early Detection of Ovarian Cancer.Authorship 1018297833976232Stanton SE, Gad E, Ramos E, Corulli L, Annis J, Childs J, Katayama H, Hanash S, Marks J, Disis MLNPJ breast cancerTumor-associated autoantibodies from mouse breast cancer models are found in serum of breast cancer patients. 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J Immunother Cancer. 2021 06; 9(6).J Immunother Cancer2021-06-01T00:00:002021Protein citrullination as a source of cancer neoantigens.Authorship 10259212034298853Dayde D, Gunther J, Hirayama Y, Weksberg DC, Boutin A, Parhy G, Aguilar-Bonavides C, Wang H, Katayama H, Abe Y, Do KA, Hara K, Kinoshita T, Komori K, Shimizu Y, Tajika M, Niwa Y, Wang YA, DePinho R, Hanash S, Krishnan S, Taguchi ACancersIdentification of Blood-Based Biomarkers for the Prediction of the Response to Neoadjuvant Chemoradiation in Rectal Cancer. 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J Clin Endocrinol Metab. 2021 11 19; 106(12):e4969-e4980.J Clin Endocrinol Metab2021-11-19T00:00:002021A Blood-based Polyamine Signature Associated With MEN1 Duodenopancreatic Neuroendocrine Tumor Progression.Authorship 10267631234350403Shu H, Chiang T, Wei P, Do KA, Lesslie MD, Cohen EO, Srinivasan A, Moseley TW, Chang Sen LQ, Leung JWT, Dennison JB, Hanash SM, Weaver OORadiology. Artificial intelligenceA Deep Learning Approach to Re-create Raw Full-Field Digital Mammograms for Breast Density and Texture Analysis. Radiol Artif Intell. 2021 Jul; 3(4):e200097.Radiol Artif Intell2021-04-14T00:00:002021A Deep Learning Approach to Re-create Raw Full-Field Digital Mammograms for Breast Density and Texture Analysis.Authorship 10284381934439128Fahrmann JF, Katayama H, Irajizad E, Chakraborty A, Kato T, Mao X, Park S, Murage E, Rusling L, Yu CY, Cai Y, Hsiao FC, Dennison JB, Tran H, Ostrin E, Wilson DO, Yuan JM, Vykoukal J, Hanash SCancersPlasma Based Protein Signatures Associated with Small Cell Lung Cancer. Cancers (Basel). 2021 Aug 06; 13(16).Cancers (Basel)2021-08-06T00:00:002021Plasma Based Protein Signatures Associated with Small Cell Lung Cancer.Authorship 10288851934471235Zhu M, Peng R, Liang X, Lan Z, Tang M, Hou P, Song JH, Mak CSL, Park J, Zheng SE, Huang A, Ma X, Chen R, Chang Q, Logothetis CJ, Jain AK, Lin SH, Katayama H, Hanash S, Wang GOncogeneP4HA2-induced prolyl hydroxylation suppresses YAP1-mediated prostate cancer cell migration, invasion, and metastasis. 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JCO Precis Oncol. 2020 Nov; 4:426-436.JCO Precis Oncol2020-11-01T00:00:002020CES2 Expression in Pancreatic Adenocarcinoma Is Predictive of Response to Irinotecan and Is Associated With Type 2 Diabetes.Authorship 10467422135626147Fahrmann JF, Tanaka I, Irajizad E, Mao X, Dennison JB, Murage E, Casabar J, Mayo J, Peng Q, Celiktas M, Vykoukal JV, Park S, Taguchi A, Delgado O, Tripathi SC, Katayama H, Soto LMS, Rodriguez-Canales J, Behrens C, Wistuba I, Hanash S, Ostrin EJCancersMutational Activation of the NRF2 Pathway Upregulates Kynureninase Resulting in Tumor Immunosuppression and Poor Outcome in Lung Adenocarcinoma. 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Transl Lung Cancer Res. 2022 Jul; 11(7):1230-1232.Transl Lung Cancer Res2022-07-01T00:00:002022Lung cancer susceptibility beyond smoking history: opportunities and challenges.36291787Rigaud B, Weaver OO, Dennison JB, Awais M, Anderson BM, Chiang TD, Yang WT, Leung JWT, Hanash SM, Brock KKCancersDeep Learning Models for Automated Assessment of Breast Density Using Multiple Mammographic Image Types. Cancers (Basel). 2022 Oct 13; 14(20).Cancers (Basel)2022-10-13T00:00:002022Deep Learning Models for Automated Assessment of Breast Density Using Multiple Mammographic Image Types.36012199Irajizad E, Fahrmann JF, Long JP, Vykoukal J, Kobayashi M, Capello M, Yu CY, Cai Y, Hsiao FC, Patel N, Park S, Peng Q, Dennison JB, Kato T, Tai MC, Taguchi A, Kadara H, Wistuba II, Katayama H, Do KA, Hanash SM, Ostrin EJInternational journal of molecular sciencesA Comprehensive Search of Non-Canonical Proteins in Non-Small Cell Lung Cancer and Their Impact on the Immune Response. 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Eur Urol Oncol. 2023 Jun; 6(3):282-288.Eur Urol Oncol2022-08-20T00:00:002022Coffee Intake, Caffeine Metabolism Genotype, and Survival Among Men with Prostate Cancer.36002248Fan Y, Li Y, Yao X, Jin J, Scott A, Liu B, Wang S, Huo L, Wang Y, Wang R, Pool Pizzi M, Ma L, Shao S, Sewastjanow-Silva M, Waters R, Chatterjee D, Liu B, Shanbhag N, Peng G, Calin GA, Mazur PK, Hanash SM, Ishizawa J, Hirata Y, Nagano O, Wang Z, Wang L, Xian W, McKeon F, Ajani JA, Song SGutEpithelial SOX9 drives progression and metastases of gastric adenocarcinoma by promoting immunosuppressive tumour microenvironment. 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Breast Cancer Res. 2023 06 06; 25(1):62.Breast Cancer Res2023-06-06T00:00:002023Targeting CXCR4 abrogates resistance to trastuzumab by blocking cell cycle progression and synergizes with docetaxel in breast cancer treatment.37379494Irajizad E, Fahrmann JF, Marsh T, Vykoukal J, Dennison JB, Long JP, Do KA, Feng Z, Hanash S, Ostrin EJJournal of clinical oncology : official journal of the American Society of Clinical OncologyMortality Benefit of a Blood-Based Biomarker Panel for Lung Cancer on the Basis of the Prostate, Lung, Colorectal, and Ovarian Cohort. J Clin Oncol. 2023 09 20; 41(27):4360-4368.J Clin Oncol2023-06-28T00:00:002023Mortality Benefit of a Blood-Based Biomarker Panel for Lung Cancer on the Basis of the Prostate, Lung, Colorectal, and Ovarian Cohort.37289498Ostrin EJ, Rider NL, Alousi AM, Irajizad E, Li L, Peng Q, Kim ST, Bashoura L, Arain MH, Noor LZ, Patel N, Mehta R, Popat UR, Hosing C, Jenq RR, Rondon G, Hanash SM, Paczesny S, Shpall EJ, Champlin RE, Dickey BF, Sheshadri AImmunoHorizonsA Nasal Inflammatory Cytokine Signature Is Associated with Early Graft-versus-Host Disease of the Lung after Allogeneic Hematopoietic Cell Transplantation: Proof of Concept. 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J Clin Endocrinol Metab. 2023 Nov 17; 108(12):3260-3271.J Clin Endocrinol Metab2023-11-17T00:00:002023Blood-based Proteomic Signatures Associated With MEN1-related Duodenopancreatic Neuroendocrine Tumor Progression.37305699Zhao S, Wang R, Song S, Hao D, Han G, Song X, Zhang J, Pizzi MP, Shanbhag N, Futreal A, Badgwell B, Harada K, Calin G, Vykoukal J, Yu CY, Katayama H, Hanash SM, Wang L, Ajani JAiScienceProteogenomic landscape of gastric adenocarcinoma peritoneal metastases. iScience. 2023 Jun 16; 26(6):106913.iScience2023-05-19T00:00:002023Proteogenomic landscape of gastric adenocarcinoma peritoneal metastases.Authorship 107898426Authorship 107746222Authorship 107892124Authorship 107909714Authorship 10795121637738407Fan Y, Song S, Li Y, Dhar SS, Jin J, Yoshimura K, Yao X, Wang R, Scott AW, Pizzi MP, Wu J, Ma L, Calin GA, Hanash S, Wang L, Curran M, Ajani JACancer researchGalectin-3 Cooperates with CD47 to Suppress Phagocytosis and T-cell Immunity in Gastric Cancer Peritoneal Metastases. 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PG, Thompson TCClinical cancer research : an official journal of the American Association for Cancer ResearchSPOP Mutations Target STING1 Signaling in Prostate Cancer and Create Therapeutic Vulnerabilities to PARP Inhibitor-Induced Growth Suppression. Clin Cancer Res. 2023 11 01; 29(21):4464-4478.Clin Cancer Res2023-11-01T00:00:002023SPOP Mutations Target STING1 Signaling in Prostate Cancer and Create Therapeutic Vulnerabilities to PARP Inhibitor-Induced Growth Suppression.Authorship 1082696637876966Le?n-Letelier RA, Dou R, Vykoukal J, Sater AHA, Ostrin E, Hanash S, Fahrmann JFFrontiers in oncologyThe kynurenine pathway presents multi-faceted metabolic vulnerabilities in cancer. 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CA Cancer J Clin. 2024 Mar 22.CA Cancer J Clin2024-03-22T00:00:002024Multicancer detection tests: What we know and what we don't know.true1ProfessorProfessortrue1ProfessorProfessortrue1ProfessorProfessortrue1Assistant ProfessorAssistant Professortrue1ProfessorProfessortrue1ProfessorProfessortrue1Assistant ProfessorAssistant Professortrue1ProfessorProfessortrue1ProfessorProfessortrue1ProfessorProfessor24553445Peng G, Chun-Jen Lin C, Mo W, Dai H, Park YY, Kim SM, Peng Y, Mo Q, Siwko S, Hu R, Lee JS, Hennessy B, Hanash S, Mills GB, Lin SYNature communicationsGenome-wide transcriptome profiling of homologous recombination DNA repair. Nat Commun. 2014; 5:3361.Nat Commun2014-01-01T00:00:002014Genome-wide transcriptome profiling of homologous recombination DNA repair.