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MELEK NIHAN UCISIK

TitleInstructor
InstitutionBaylor College of Medicine
DepartmentDepartment of Pathology & Immunology
DivisionPathology
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Chacón KN, Perkins J, Mathe Z, Alwan K, Ho EN, Ucisik MN, Merz KM, Blackburn NJ. Trapping intermediates in metal transfer reactions of the CusCBAF export pump of Escherichia coli. Commun Biol. 2018; 1:192. PMID: 30456313.
      View in: PubMed
    2. Ucisik MN, Hammes-Schiffer S. Effects of Active Site Mutations on Specificity of Nucleobase Binding in Human DNA Polymerase ?. J Phys Chem B. 2017 04 20; 121(15):3667-3675. PMID: 28423907.
      View in: PubMed
    3. Ucisik MN, Bevilacqua PC, Hammes-Schiffer S. Molecular Dynamics Study of Twister Ribozyme: Role of Mg(2+) Ions and the Hydrogen-Bonding Network in the Active Site. Biochemistry. 2016 07 12; 55(27):3834-46. PMID: 27295275.
      View in: PubMed
    4. Ucisik MN, Hammes-Schiffer S. Comparative Molecular Dynamics Studies of Human DNA Polymerase ?. J Chem Inf Model. 2015 Dec 28; 55(12):2672-81. PMID: 26562587.
      View in: PubMed
    5. Ucisik MN, Hammes-Schiffer S. Relative Binding Free Energies of Adenine and Guanine to Damaged and Undamaged DNA in Human DNA Polymerase ?: Clues for Fidelity and Overall Efficiency. J Am Chem Soc. 2015 Oct 21; 137(41):13240-3. PMID: 26434497.
      View in: PubMed
    6. Ucisik MN, Chakravorty DK, Merz KM. Models for the Metal Transfer Complex of the N-Terminal Region of CusB and CusF. Biochemistry. 2015 Jul 14; 54(27):4226-35. PMID: 26079272.
      View in: PubMed
    7. Minkara MS, Ucisik MN, Weaver MN, Merz KM. Molecular Dynamics Study of Helicobacter pylori Urease. J Chem Theory Comput. 2014 May 13; 10(5):1852-1862. PMID: 24839409.
      View in: PubMed
    8. Ucisik MN, Zheng Z, Faver JC, Merz KM. Bringing Clarity to the Prediction of Protein-Ligand Binding Free Energies via "Blurring" J Chem Theory Comput. 2014 Mar 11; 10(3):1314-1325. PMID: 24803861.
      View in: PubMed
    9. Zheng Z, Ucisik MN, Merz KM. The Movable Type Method Applied to Protein-Ligand Binding. J Chem Theory Comput. 2013 Dec 10; 9(12):5526-5538. PMID: 24535920.
      View in: PubMed
    10. Ucisik MN, Chakravorty DK, Merz KM. Structure and dynamics of the N-terminal domain of the Cu(I) binding protein CusB. Biochemistry. 2013 Oct 01; 52(39):6911-23. PMID: 23988152.
      View in: PubMed
    11. Faver JC, Ucisik MN, Yang W, Merz KM. Computer-aided Drug Design: Using Numbers to your Advantage. ACS Med Chem Lett. 2013 Sep 12; 4(9). PMID: 24312700.
      View in: PubMed
    12. Benson ML, Faver JC, Ucisik MN, Dashti DS, Zheng Z, Merz KM. Prediction of trypsin/molecular fragment binding affinities by free energy decomposition and empirical scores. J Comput Aided Mol Des. 2012 May; 26(5):647-59. PMID: 22476578.
      View in: PubMed
    13. Yang Y, Wang B, Ucisik MN, Cui G, Fierke CA, Merz KM. Insights into the mechanistic dichotomy of the protein farnesyltransferase peptide substrates CVIM and CVLS. J Am Chem Soc. 2012 Jan 18; 134(2):820-3. PMID: 22206225.
      View in: PubMed
    14. Chakravorty DK, Wang B, Ucisik MN, Merz KM. Insight into the cation-p interaction at the metal binding site of the copper metallochaperone CusF. J Am Chem Soc. 2011 Dec 07; 133(48):19330-3. PMID: 22029374.
      View in: PubMed
    15. Ucisik MN, Dashti DS, Faver JC, Merz KM. Pairwise additivity of energy components in protein-ligand binding: the HIV II protease-Indinavir case. J Chem Phys. 2011 Aug 28; 135(8):085101. PMID: 21895219.
      View in: PubMed
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