Matthew Brandon Cooke

TitleGraduate Student
InstitutionBaylor College of Medicine
DepartmentGenetics & Genomics
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Abdel-Wahab R, Yap TA, Madison R, Pant S, Cooke M, Wang K, Zhao H, Bekaii-Saab T, Karatas E, Kwong LN, Meric-Bernstam F, Borad M, Javle M. Genomic profiling reveals high frequency of DNA repair genetic aberrations in gallbladder cancer. Sci Rep. 2020 12 16; 10(1):22087. PMID: 33328484.
      Citations: 3     Fields:    Translation:HumansCells
    2. Baker BA, Cooke MB, Belski R, Carins JE. The Influence of Training on New Army Recruits' Energy and Macronutrient Intakes and Performance: A Systematic Literature Review. J Acad Nutr Diet. 2020 10; 120(10):1687-1705. PMID: 32828738.
      Citations:    Fields:    Translation:Humans
    3. Danaher J, Stathis CG, Wilson RA, Moreno-Asso A, Wellard RM, Cooke MB. High intensity exercise downregulates FTO mRNA expression during the early stages of recovery in young males and females. Nutr Metab (Lond). 2020; 17:68. PMID: 32821265.
    4. Keenan S, Cooke MB, Belski R. The Effects of Intermittent Fasting Combined with Resistance Training on Lean Body Mass: A Systematic Review of Human Studies. Nutrients. 2020 Aug 06; 12(8). PMID: 32781538.
      Citations:    Fields:    Translation:Humans
    5. Cole JD, Espinueva DF, Seib DR, Ash AM, Cooke MB, Cahill SP, O'Leary TP, Kwan SS, Snyder JS. Adult-Born Hippocampal Neurons Undergo Extended Development and Are Morphologically Distinct from Neonatally-Born Neurons. J Neurosci. 2020 07 22; 40(30):5740-5756. PMID: 32571837.
      Citations: 5     Fields:    Translation:AnimalsCells
    6. Wilson RA, Stathis CG, Hayes A, Cooke MB. Intermittent Fasting and High-Intensity Exercise Elicit Sexual-Dimorphic and Tissue-Specific Adaptations in Diet-Induced Obese Mice. Nutrients. 2020 Jun 12; 12(6). PMID: 32545529.
      Citations: 3     Fields:    Translation:Animals
    7. Danaher J, Stathis CG, Cooke MB. Similarities in Metabolic Flexibility and Hunger Hormone Ghrelin Exist between FTO Gene Variants in Response to an Acute Dietary Challenge. Nutrients. 2019 Oct 18; 11(10). PMID: 31635368.
      Citations:    Fields:    Translation:Humans
    8. Cooke MB, O'Leary TP, Harris P, Ma R, Brown RE, Snyder JS. Pathfinder: open source software for analyzing spatial navigation search strategies. F1000Res. 2019; 8:1521. PMID: 32025289.
      Citations: 2     Fields:    Translation:HumansAnimals
    9. Yu RQ, Cooke M, Seib DR, Zhao J, Snyder JS. Adult neurogenesis promotes efficient, nonspecific search strategies in a spatial alternation water maze task. Behav Brain Res. 2019 12 30; 376:112151. PMID: 31445978.
      Citations: 6     Fields:    Translation:Animals
    10. Serebriiskii IG, Connelly C, Frampton G, Newberg J, Cooke M, Miller V, Ali S, Ross JS, Handorf E, Arora S, Lieu C, Golemis EA, Meyer JE. Comprehensive characterization of RAS mutations in colon and rectal cancers in old and young patients. Nat Commun. 2019 08 19; 10(1):3722. PMID: 31427573.
      Citations: 31     Fields:    Translation:Humans
    11. Lieu CH, Golemis EA, Serebriiskii IG, Newberg J, Hemmerich A, Connelly C, Messersmith WA, Eng C, Eckhardt SG, Frampton G, Cooke M, Meyer JE. Comprehensive Genomic Landscapes in Early and Later Onset Colorectal Cancer. Clin Cancer Res. 2019 10 01; 25(19):5852-5858. PMID: 31243121.
      Citations: 11     Fields:    Translation:Humans
    12. Stough C, Nankivell M, Camfield DA, Perry NL, Pipingas A, Macpherson H, Wesnes K, Ou R, Hare D, de Haan J, Head G, Lansjoen P, Langsjoen A, Tan B, Pase MP, King R, Rowsell R, Zwalf O, Rathner Y, Cooke M, Rosenfeldt F. CoQ10 and Cognition a Review and Study Protocol for a 90-Day Randomized Controlled Trial Investigating the Cognitive Effects of Ubiquinol in the Healthy Elderly. Front Aging Neurosci. 2019; 11:103. PMID: 31191293.
      Citations: 4     
    13. Yakirevich E, Madison R, Fridman E, Mangray S, Carneiro BA, Lu S, Cooke M, Bratslavsky G, Webster J, Ross JS, Ali SM. Comprehensive Genomic Profiling of Adult Renal Sarcomas Provides Insight into Disease Biology and Opportunities for Targeted Therapies. Eur Urol Oncol. 2021 Apr; 4(2):282-288. PMID: 31412008.
      Citations: 1     Fields:    
    14. Galbreath M, Campbell B, LaBounty P, Bunn J, Dove J, Harvey T, Hudson G, Gutierrez JL, Levers K, Galvan E, Jagim A, Greenwood L, Cooke MB, Greenwood M, Rasmussen C, Kreider RB. Effects of Adherence to a Higher Protein Diet on Weight Loss, Markers of Health, and Functional Capacity in Older Women Participating in a Resistance-Based Exercise Program. Nutrients. 2018 Aug 11; 10(8). PMID: 30103509.
      Citations: 5     Fields:    Translation:Humans
    15. Cooke MB, Rybalka E, Stathis CG, Hayes A. Myoprotective Potential of Creatine Is Greater than Whey Protein after Chemically-Induced Damage in Rat Skeletal Muscle. Nutrients. 2018 Apr 30; 10(5). PMID: 29710855.
      Citations: 1     Fields:    Translation:Animals
    16. Wilson RA, Deasy W, Stathis CG, Hayes A, Cooke MB. Intermittent Fasting with or without Exercise Prevents Weight Gain and Improves Lipids in Diet-Induced Obese Mice. Nutrients. 2018 Mar 12; 10(3). PMID: 29534545.
      Citations: 2     Fields:    Translation:Animals
    17. Cooke MB, Nix CM, Greenwood LD, Greenwood MC. No Differences Between Alter G-Trainer and Active and Passive Recovery Strategies on Isokinetic Strength, Systemic Oxidative Stress and Perceived Muscle Soreness After Exercise-Induced Muscle Damage. J Strength Cond Res. 2018 Mar; 32(3):736-747. PMID: 27941488.
      Citations: 1     Fields:    Translation:HumansCells
    18. Shelmadine BD, Bowden RG, Moreillon JJ, Cooke MB, Yang P, Deike E, Griggs JO, Wilson RL. A Pilot Study to Examine the Effects of an Anti-inflammatory Supplement on Eicosanoid Derivatives in Patients with Chronic Kidney Disease. J Altern Complement Med. 2017 Aug; 23(8):632-638. PMID: 28375641.
      Citations: 4     Fields:    Translation:HumansAnimals
    19. Wilson RA, Deasy W, Hayes A, Cooke MB. High fat diet and associated changes in the expression of micro-RNAs in tissue: Lessons learned from animal studies. Mol Nutr Food Res. 2017 06; 61(6). PMID: 28233461.
      Citations: 4     Fields:    Translation:HumansAnimalsCells
    20. Rybalka E, Timpani CA, Stathis CG, Hayes A, Cooke MB. Metabogenic and Nutriceutical Approaches to Address Energy Dysregulation and Skeletal Muscle Wasting in Duchenne Muscular Dystrophy. Nutrients. 2015 Nov 26; 7(12):9734-67. PMID: 26703720.
      Citations: 5     Fields:    Translation:Humans
    21. Li R, Ferreira MP, Cooke MB, La Bounty P, Campbell B, Greenwood M, Willoughby DS, Kreider RB. Co-ingestion of carbohydrate with branched-chain amino acids or L-leucine does not preferentially increase serum IGF-1 and expression of myogenic-related genes in response to a single bout of resistance exercise. Amino Acids. 2015 Jun; 47(6):1203-13. PMID: 25740607.
      Citations: 1     Fields:    Translation:Humans
    22. Rybalka E, Timpani CA, Cooke MB, Williams AD, Hayes A. Defects in mitochondrial ATP synthesis in dystrophin-deficient mdx skeletal muscles may be caused by complex I insufficiency. PLoS One. 2014; 9(12):e115763. PMID: 25541951.
      Citations: 33     Fields:    Translation:AnimalsCells
    23. West AD, Cooke MB, LaBounty PM, Byars AG, Greenwood M. Effects of G-trainer, cycle ergometry, and stretching on physiological and psychological recovery from endurance exercise. J Strength Cond Res. 2014 Dec; 28(12):3453-61. PMID: 24936899.
      Citations: 3     Fields:    Translation:Humans
    24. Cooke MB, Brabham B, Buford TW, Shelmadine BD, McPheeters M, Hudson GM, Stathis C, Greenwood M, Kreider R, Willoughby DS. Creatine supplementation post-exercise does not enhance training-induced adaptations in middle to older aged males. Eur J Appl Physiol. 2014 Jun; 114(6):1321-32. PMID: 24633488.
      Citations: 9     Fields:    Translation:Humans
    25. Ferreira MP, Li R, Cooke M, Kreider RB, Willoughby DS. Periexercise coingestion of branched-chain amino acids and carbohydrate in men does not preferentially augment resistance exercise-induced increases in phosphatidylinositol 3 kinase/protein kinase B-mammalian target of rapamycin pathway markers indicative of muscle protein synthesis. Nutr Res. 2014 Mar; 34(3):191-8. PMID: 24655485.
      Citations: 3     Fields:    Translation:HumansCells
    26. Buford TW, Anton SD, Clark DJ, Higgins TJ, Cooke MB. Optimizing the benefits of exercise on physical function in older adults. PM R. 2014 Jun; 6(6):528-43. PMID: 24361365.
      Citations: 11     Fields:    Translation:Humans
    27. Wilkinson M, Cooke M, Murray S, Thompson KG, St Clair Gibson A, Winter EM. Physiological correlates of multiple-sprint ability and performance in international-standard squash players. J Strength Cond Res. 2012 Feb; 26(2):540-7. PMID: 22240546.
      Citations:    Fields:    Translation:Humans
    28. Deike E, Bowden RG, Moreillon JJ, Griggs JO, Wilson RL, Cooke M, Shelmadine BD, Beaujean AA. The effects of fish oil supplementation on markers of inflammation in chronic kidney disease patients. J Ren Nutr. 2012 Nov; 22(6):572-7. PMID: 22285316.
      Citations: 6     Fields:    Translation:Humans
    29. Cooke MB, La Bounty P, Buford T, Shelmadine B, Redd L, Hudson G, Willoughby DS. Ingestion of 10 grams of whey protein prior to a single bout of resistance exercise does not augment Akt/mTOR pathway signaling compared to carbohydrate. J Int Soc Sports Nutr. 2011 Nov 08; 8:18. PMID: 22068021.
      Citations: 3     Fields:    
    30. Kreider RB, Serra M, Beavers KM, Moreillon J, Kresta JY, Byrd M, Oliver JM, Gutierrez J, Hudson G, Deike E, Shelmadine B, Leeke P, Rasmussen C, Greenwood M, Cooke MB, Kerksick C, Campbell JK, Beiseigel J, Jonnalagadda SS. A structured diet and exercise program promotes favorable changes in weight loss, body composition, and weight maintenance. J Am Diet Assoc. 2011 Jun; 111(6):828-43. PMID: 21616195.
      Citations: 12     Fields:    Translation:Humans
    31. Buford TW, Cooke MB, Shelmadine BD, Hudson GM, Redd LL, Willoughby DS. Differential gene expression of FoxO1, ID1, and ID3 between young and older men and associations with muscle mass and function. Aging Clin Exp Res. 2011 Jun; 23(3):170-4. PMID: 21993163.
      Citations: 5     Fields:    Translation:Humans
    32. Cooke MB, Rybalka E, Stathis CG, Cribb PJ, Hayes A. Whey protein isolate attenuates strength decline after eccentrically-induced muscle damage in healthy individuals. J Int Soc Sports Nutr. 2010 Sep 22; 7:30. PMID: 20860817.
      Citations: 23     Fields:    
    33. Beavers KM, Serra MC, Beavers DP, Cooke MB, Willoughby DS. Soy and the exercise-induced inflammatory response in postmenopausal women. Appl Physiol Nutr Metab. 2010 Jun; 35(3):261-9. PMID: 20555369.
      Citations: 7     Fields:    Translation:HumansAnimals
    34. Culbertson JY, Kreider RB, Greenwood M, Cooke M. Effects of beta-alanine on muscle carnosine and exercise performance: a review of the current literature. Nutrients. 2010 01; 2(1):75-98. PMID: 22253993.
      Citations: 23     Fields:    Translation:HumansAnimals
    35. Buford TW, Cooke MB, Manini TM, Leeuwenburgh C, Willoughby DS. Effects of age and sedentary lifestyle on skeletal muscle NF-kappaB signaling in men. J Gerontol A Biol Sci Med Sci. 2010 May; 65(5):532-7. PMID: 20045871.
      Citations: 35     Fields:    Translation:HumansCells
    36. Buford TW, Cooke MB, Redd LL, Hudson GM, Shelmadine BD, Willoughby DS. Protease supplementation improves muscle function after eccentric exercise. Med Sci Sports Exerc. 2009 Oct; 41(10):1908-14. PMID: 19727022.
      Citations: 16     Fields:    Translation:HumansCells
    37. Beavers KM, Serra MC, Beavers DP, Cooke MB, Willoughby DS. Soymilk supplementation does not alter plasma markers of inflammation and oxidative stress in postmenopausal women. Nutr Res. 2009 Sep; 29(9):616-22. PMID: 19854376.
      Citations: 7     Fields:    Translation:HumansAnimals
    38. Buford TW, Cooke MB, Willoughby DS. Resistance exercise-induced changes of inflammatory gene expression within human skeletal muscle. Eur J Appl Physiol. 2009 Nov; 107(4):463-71. PMID: 19669788.
      Citations: 32     Fields:    Translation:HumansCTClinical Trials
    39. Buford TW, Cooke MB, Shelmadine BD, Hudson GM, Redd L, Willoughby DS. Effects of eccentric treadmill exercise on inflammatory gene expression in human skeletal muscle. Appl Physiol Nutr Metab. 2009 Aug; 34(4):745-53. PMID: 19767811.
      Citations: 28     Fields:    Translation:Humans
    40. Cooke MB, Rybalka E, Williams AD, Cribb PJ, Hayes A. Creatine supplementation enhances muscle force recovery after eccentrically-induced muscle damage in healthy individuals. J Int Soc Sports Nutr. 2009 Jun 02; 6:13. PMID: 19490606.
      Citations: 22     Fields:    
    41. Cooke M, Iosia M, Buford T, Shelmadine B, Hudson G, Kerksick C, Rasmussen C, Greenwood M, Leutholtz B, Willoughby D, Kreider R. Effects of acute and 14-day coenzyme Q10 supplementation on exercise performance in both trained and untrained individuals. J Int Soc Sports Nutr. 2008 Mar 04; 5:8. PMID: 18318910.
      Citations: 24     Fields:    
    42. Williams AD, Cribb PJ, Cooke MB, Hayes A. The effect of ephedra and caffeine on maximal strength and power in resistance-trained athletes. J Strength Cond Res. 2008 Mar; 22(2):464-70. PMID: 18550961.
      Citations: 19     Fields:    Translation:HumansAnimals
    43. Roberts MD, Iosia M, Kerksick CM, Taylor LW, Campbell B, Wilborn CD, Harvey T, Cooke M, Rasmussen C, Greenwood M, Wilson R, Jitomir J, Willoughby D, Kreider RB. Effects of arachidonic acid supplementation on training adaptations in resistance-trained males. J Int Soc Sports Nutr. 2007 Nov 28; 4:21. PMID: 18045476.
      Citations: 12     Fields:    
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