Header Logo

Amala Kaja

TitlePostdoc Fellows and Associates
InstitutionBaylor College of Medicine
DepartmentPostDoc
Address
vCardDownload vCard

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Barman P, Ferdoush J, Kaja A, Chakraborty P, Uprety B, Bhaumik R, Bhaumik R, Bhaumik SR. Ubiquitin-proteasome system regulation of a key gene regulatory factor, Paf1C. Gene. 2024 Feb 05; 894:148004. PMID: 37977317.
      Citations:    Fields:    Translation:HumansAnimals
    2. Barman P, Kaja A, Chakraborty P, Bhaumik SR. Chromatin and non-chromatin immunoprecipitations to capture protein-protein and protein-nucleic acid interactions in living cells. Methods. 2023 10; 218:158-166. PMID: 37611837; PMCID: PMC10528071.
      Citations:    Fields:    Translation:Cells
    3. Barman P, Kaja A, Chakraborty P, Guha S, Roy A, Ferdoush J, Bhaumik SR. A novel ubiquitin-proteasome system regulation of Sgf73/ataxin-7 that maintains the integrity of the coactivator SAGA in orchestrating transcription. Genetics. 2023 07 06; 224(3). PMID: 37075097; PMCID: PMC10324951.
      Citations: 1     Fields:    Translation:Animals
    4. Kaja A, Barman P, Guha S, Bhaumik SR. Tandem Affinity Purification and Mass-Spectrometric Analysis of FACT and Associated Proteins. Methods Mol Biol. 2023; 2701:209-227. PMID: 37574485.
      Citations: 1     Fields:    Translation:Cells
    5. Barman P, Sen R, Kaja A, Ferdoush J, Guha S, Govind CK, Bhaumik SR. Genome-Wide Regulations of the Preinitiation Complex Formation and Elongating RNA Polymerase II by an E3 Ubiquitin Ligase, San1. Mol Cell Biol. 2022 01 20; 42(1):e0036821. PMID: 34661445; PMCID: PMC8773080.
      Citations:    Fields:    Translation:AnimalsCells
    6. Kaja A, Adhikari A, Karmakar S, Zhang W, Rothschild G, Basu U, Batra SK, Davie JK, Bhaumik SR. Proteasomal Regulation of Mammalian SPT16 in Controlling Transcription. Mol Cell Biol. 2021 03 24; 41(4). PMID: 33526453; PMCID: PMC8088127.
      Citations: 1     Fields:    Translation:HumansAnimalsCells
    7. Ferdoush J, Sen R, Durairaj G, Barman P, Kaja A, Guha S, Bhaumik SR. An F-Box Protein, Mdm30, Interacts with TREX Subunit Sub2 To Regulate Cellular Abundance Cotranscriptionally in Orchestrating mRNA Export Independently of Splicing and Mitochondrial Function. Mol Cell Biol. 2020 03 16; 40(7). PMID: 31932480; PMCID: PMC7076257.
      Citations: 2     Fields:    Translation:AnimalsCells
    8. Sen R, Barman P, Kaja A, Ferdoush J, Lahudkar S, Roy A, Bhaumik SR. Distinct Functions of the Cap-Binding Complex in Stimulation of Nuclear mRNA Export. Mol Cell Biol. 2019 04 15; 39(8). PMID: 30745412; PMCID: PMC6447411.
      Citations: 6     Fields:    Translation:AnimalsCells
    9. Uprety B, Kaja A, Bhaumik SR. TOR Facilitates the Targeting of the 19S Proteasome Subcomplex To Enhance Transcription Complex Assembly at the Promoters of the Ribosomal Protein Genes. Mol Cell Biol. 2018 07 15; 38(14). PMID: 29712756; PMCID: PMC6024167.
      Citations: 5     Fields:    Translation:AnimalsCells
    10. Ferdoush J, Sen R, Kaja A, Barman P, Bhaumik SR. Two Distinct Regulatory Mechanisms of Transcriptional Initiation in Response to Nutrient Signaling. Genetics. 2018 01; 208(1):191-205. PMID: 29141908; PMCID: PMC5753858.
      Citations: 6     Fields:    Translation:AnimalsCells
    11. Ferdoush J, Karmakar S, Barman P, Kaja A, Uprety B, Batra SK, Bhaumik SR. Ubiquitin-Proteasome System Regulation of an Evolutionarily Conserved RNA Polymerase II-Associated Factor 1 Involved in Pancreatic Oncogenesis. Biochemistry. 2017 11 21; 56(46):6083-6086. PMID: 29023102.
      Citations: 1     Fields:    Translation:HumansAnimalsCells
    12. Sen R, Ferdoush J, Kaja A, Bhaumik SR. Correction for Sen et al., "Fine-Tuning of FACT by the Ubiquitin Proteasome System in Regulation of Transcriptional Elongation". Mol Cell Biol. 2017 07 15; 37(14). PMID: 28663277; PMCID: PMC5492171.
      Citations:    Fields:    
    13. Sen R, Kaja A, Ferdoush J, Lahudkar S, Barman P, Bhaumik SR. An mRNA Capping Enzyme Targets FACT to the Active Gene To Enhance the Engagement of RNA Polymerase II into Transcriptional Elongation. Mol Cell Biol. 2017 07 01; 37(13). PMID: 28396559; PMCID: PMC5472824.
      Citations: 7     Fields:    Translation:AnimalsCells
    14. Sen R, Ferdoush J, Kaja A, Bhaumik SR. Fine-Tuning of FACT by the Ubiquitin Proteasome System in Regulation of Transcriptional Elongation. Mol Cell Biol. 2016 06 01; 36(11):1691-703. PMID: 27044865; PMCID: PMC4959319.
      Citations: 10     Fields:    Translation:AnimalsCells
    15. Uprety B, Kaja A, Ferdoush J, Sen R, Bhaumik SR. Regulation of Antisense Transcription by NuA4 Histone Acetyltransferase and Other Chromatin Regulatory Factors. Mol Cell Biol. 2016 Jan 11; 36(6):992-1006. PMID: 26755557; PMCID: PMC4810466.
      Citations: 7     Fields:    Translation:AnimalsCells
    Kaja's Networks
    Click the
    Explore
    buttons for more information and interactive visualizations!
    Concepts (70)
    Explore
    _
    Similar People (60)
    Explore
    _
    Same Department Expand Description
    Explore
    _