InstitutionBaylor College of Medicine
DepartmentDepartment of Pathology & Immunology
AddressOne Baylor Plaza
Houston, TX 77030
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    Collapse Biography 
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    2016 - 2018CPRIT Training Award, Baylor College of Medicine

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    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Mishra MK, Gupta S, Sehgal S. Assessing long non-coding RNAs in tobacco-associated oral cancer. Curr Cancer Drug Targets. 2022 Jun 23. PMID: 35747968.
      Citations:    Fields:    
    2. Gupta SK, Yen L. Chimeric RNA Design Principles for RNA-Mediated Gene Fusion. Cells. 2022 03 16; 11(6). PMID: 35326453.
      Citations:    Fields:    Translation:Animals
    3. Gupta SK, Jea JD, Yen L. RNA-driven JAZF1-SUZ12 gene fusion in human endometrial stromal cells. PLoS Genet. 2021 12; 17(12):e1009985. PMID: 34928964.
      Citations: 1     Fields:    Translation:HumansCells
    4. Taneja G, Sarin E, Bajpayee D, Chaudhuri S, Verma G, Parashar R, Chaudhry N, Mohanty JS, Bisht N, Gupta A, Tomar SS, Patel R, Sridhar VS, Joshi A, Rathi C, Baswal D, Gupta S, Gera R. Care Around Birth Approach: A Training, Mentoring, and Quality Improvement Model to Optimize Intrapartum and Immediate Postpartum Quality of Care in India. Glob Health Sci Pract. 2021 09 30; 9(3):590-610. PMID: 34593584.
      Citations:    Fields:    Translation:Humans
    5. Hanania NA, Fortis S, Haselkorn T, Gupta S, Mumneh N, Yoo B, Holweg CTJ, Chipps BE. Omalizumab in Asthma with Fixed Airway Obstruction: Post Hoc Analysis of EXTRA. J Allergy Clin Immunol Pract. 2022 01; 10(1):222-228. PMID: 34419680.
      Citations: 3     Fields:    Translation:Humans
    6. Pande RK, Bhalla A, Myatra SN, Yaddanpuddi LN, Gupta S, Sahoo TK, Prakash R, Sahu TA, Jain A, Gopal PB, Chaudhry D, Govil D, Dixit S, Samavedam S. Procedures in COVID-19 Patients: Part-I. Indian J Crit Care Med. 2020 Nov; 24(Suppl 5):S263-S271. PMID: 33354050.
      Citations: 2     
    7. Pande RK, Bhalla A, Myatra SN, Yaddanpuddi LN, Gupta S, Sahoo TK, Prakash R, Sahu TA, Jain A, Gopal PB, Chaudhry D, Govil D, Dixit S, Samavedam S. Procedures in COVID-19 Patients: Part-II. Indian J Crit Care Med. 2020 Nov; 24(Suppl 5):S272-S279. PMID: 33354051.
      Citations: 1     
    8. Chen YJ, Chen CY, Mai TL, Chuang CF, Chen YC, Gupta SK, Yen L, Wang YD, Chuang TJ. Genome-wide, integrative analysis of circular RNA dysregulation and the corresponding circular RNA-microRNA-mRNA regulatory axes in autism. Genome Res. 2020 03; 30(3):375-391. PMID: 32127416.
      Citations: 22     Fields:    Translation:HumansCells
    9. Gupta SK, Jea JD, Yen L. Validating Gene Fusion as the Source of Chimeric RNAs. Methods Mol Biol. 2020; 2079:187-207. PMID: 31728972.
      Citations:    Fields:    Translation:Humans
    10. Naipauer J, Rosario S, Gupta S, Premer C, Méndez-Solís O, Schlesinger M, Ponzinibbio V, Jain V, Gay L, Renne R, Chan HL, Morey L, Salyakina D, Abba M, Williams S, Hare JM, Goldschmidt-Clermont PJ, Mesri EA. PDGFRA defines the mesenchymal stem cell Kaposi's sarcoma progenitors by enabling KSHV oncogenesis in an angiogenic environment. PLoS Pathog. 2019 12; 15(12):e1008221. PMID: 31881074.
      Citations: 10     Fields:    Translation:AnimalsCells
    11. Gupta SK, Luo L, Yen L. RNA-mediated gene fusion in mammalian cells. Proc Natl Acad Sci U S A. 2018 12 26; 115(52):E12295-E12304. PMID: 30538195.
      Citations: 13     Fields:    Translation:HumansCells
    12. Cavallin LE, Ma Q, Naipauer J, Gupta S, Kurian M, Locatelli P, Romanelli P, Nadji M, Goldschmidt-Clermont PJ, Mesri EA. KSHV-induced ligand mediated activation of PDGF receptor-alpha drives Kaposi's sarcomagenesis. PLoS Pathog. 2018 07; 14(7):e1007175. PMID: 29985958.
      Citations: 18     Fields:    Translation:HumansAnimalsCells
    13. Joseph NA, Chiou SH, Lung Z, Yang CL, Lin TY, Chang HW, Sun HS, Gupta SK, Yen L, Wang SD, Chow KC. The role of HGF-MET pathway and CCDC66 cirRNA expression in EGFR resistance and epithelial-to-mesenchymal transition of lung adenocarcinoma cells. J Hematol Oncol. 2018 05 31; 11(1):74. PMID: 29855336.
      Citations: 30     Fields:    Translation:HumansCells
    14. Termini JM, Gupta S, Raffa FN, Guirado E, Fischl MA, Niu L, Kanagavelu S, Stone GW. Epstein Barr virus Latent Membrane Protein-1 enhances dendritic cell therapy lymph node migration, activation, and IL-12 secretion. PLoS One. 2017; 12(9):e0184915. PMID: 28910387.
      Citations: 1     Fields:    Translation:HumansAnimalsCells
    15. Chikne V, Gupta SK, Doniger T, K SR, Cohen-Chalamish S, Waldman Ben-Asher H, Kolet L, Yahia NH, Unger R, Ullu E, Kolev NG, Tschudi C, Michaeli S. The Canonical Poly (A) Polymerase PAP1 Polyadenylates Non-Coding RNAs and Is Essential for snoRNA Biogenesis in Trypanosoma brucei. J Mol Biol. 2017 10 27; 429(21):3301-3318. PMID: 28456523.
      Citations: 11     Fields:    Translation:AnimalsCells
    16. Hsiao KY, Lin YC, Gupta SK, Chang N, Yen L, Sun HS, Tsai SJ. Noncoding Effects of Circular RNA CCDC66 Promote Colon Cancer Growth and Metastasis. Cancer Res. 2017 05 01; 77(9):2339-2350. PMID: 28249903.
      Citations: 311     Fields:    Translation:HumansAnimalsCells
    17. Gupta S, Termini JM, Issac B, Guirado E, Stone GW. Constitutively Active MAVS Inhibits HIV-1 Replication via Type I Interferon Secretion and Induction of HIV-1 Restriction Factors. PLoS One. 2016; 11(2):e0148929. PMID: 26849062.
      Citations: 3     Fields:    Translation:HumansCells
    18. Gupta S, Termini JM, Rivas Y, Otero M, Raffa FN, Bhat V, Farooq A, Stone GW. A multi-trimeric fusion of CD40L and gp100 tumor antigen activates dendritic cells and enhances survival in a B16-F10 melanoma DNA vaccine model. Vaccine. 2015 Sep 11; 33(38):4798-806. PMID: 26241951.
      Citations: 5     Fields:    Translation:AnimalsCells
    19. Eliaz D, Doniger T, Tkacz ID, Biswas VK, Gupta SK, Kolev NG, Unger R, Ullu E, Tschudi C, Michaeli S. Genome-wide analysis of small nucleolar RNAs of Leishmania major reveals a rich repertoire of RNAs involved in modification and processing of rRNA. RNA Biol. 2015; 12(11):1222-55. PMID: 25970223.
      Citations: 15     Fields:    Translation:AnimalsCells
    20. Gupta SK, Chikne V, Eliaz D, Tkacz ID, Naboishchikov I, Carmi S, Waldman Ben-Asher H, Michaeli S. Two splicing factors carrying serine-arginine motifs, TSR1 and TSR1IP, regulate splicing, mRNA stability, and rRNA processing in Trypanosoma brucei. RNA Biol. 2014; 11(6):715-31. PMID: 24922194.
      Citations: 19     Fields:    Translation:AnimalsCells
    21. Kanagavelu S, Termini JM, Gupta S, Raffa FN, Fuller KA, Rivas Y, Philip S, Kornbluth RS, Stone GW. HIV-1 adenoviral vector vaccines expressing multi-trimeric BAFF and 4-1BBL enhance T cell mediated anti-viral immunity. PLoS One. 2014; 9(2):e90100. PMID: 24587225.
      Citations: 12     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    22. Gupta S, Termini JM, Raffa FN, Williams CA, Kornbluth RS, Stone GW. Vaccination with a fusion protein that introduces HIV-1 gag antigen into a multitrimer CD40L construct results in enhanced CD8+ T cell responses and protection from viral challenge by vaccinia-gag. J Virol. 2014 Feb; 88(3):1492-501. PMID: 24227853.
      Citations: 5     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    23. Gupta SK, Kosti I, Plaut G, Pivko A, Tkacz ID, Cohen-Chalamish S, Biswas DK, Wachtel C, Waldman Ben-Asher H, Carmi S, Glaser F, Mandel-Gutfreund Y, Michaeli S. The hnRNP F/H homologue of Trypanosoma brucei is differentially expressed in the two life cycle stages of the parasite and regulates splicing and mRNA stability. Nucleic Acids Res. 2013 Jul; 41(13):6577-94. PMID: 23666624.
      Citations: 22     Fields:    Translation:AnimalsCells
    24. Gupta SK, Kolet L, Doniger T, Biswas VK, Unger R, Tzfati Y, Michaeli S. The Trypanosoma brucei telomerase RNA (TER) homologue binds core proteins of the C/D snoRNA family. FEBS Lett. 2013 May 02; 587(9):1399-404. PMID: 23523918.
      Citations: 16     Fields:    Translation:AnimalsCells
    25. Gupta SK, Carmi S, Waldman Ben-Asher H, Tkacz ID, Naboishchikov I, Michaeli S. Basal splicing factors regulate the stability of mature mRNAs in trypanosomes. J Biol Chem. 2013 Feb 15; 288(7):4991-5006. PMID: 23283975.
      Citations: 17     Fields:    Translation:AnimalsCells
    26. Singh B, Bhattacharya A, Channashettar VA, Jeyaseelan CP, Gupta S, Sarma PM, Mandal AK, Lal B. Biodegradation of oil spill by petroleum refineries using consortia of novel bacterial strains. Bull Environ Contam Toxicol. 2012 Aug; 89(2):257-62. PMID: 22669336.
      Citations: 1     Fields:    Translation:CellsPHPublic Health
    27. Kanagavelu SK, Snarsky V, Termini JM, Gupta S, Barzee S, Wright JA, Khan WN, Kornbluth RS, Stone GW. Soluble multi-trimeric TNF superfamily ligand adjuvants enhance immune responses to a HIV-1 Gag DNA vaccine. Vaccine. 2012 Jan 17; 30(4):691-702. PMID: 22146759.
      Citations: 26     Fields:    Translation:HumansAnimalsCells
    28. Michaeli S, Doniger T, Gupta SK, Wurtzel O, Romano M, Visnovezky D, Sorek R, Unger R, Ullu E. RNA-seq analysis of small RNPs in Trypanosoma brucei reveals a rich repertoire of non-coding RNAs. Nucleic Acids Res. 2012 Feb; 40(3):1282-98. PMID: 21976736.
      Citations: 18     Fields:    Translation:AnimalsCells
    29. Gupta SK, Hury A, Ziporen Y, Shi H, Ullu E, Michaeli S. Small nucleolar RNA interference in Trypanosoma brucei: mechanism and utilization for elucidating the function of snoRNAs. Nucleic Acids Res. 2010 Nov; 38(20):7236-47. PMID: 20601683.
      Citations: 15     Fields:    Translation:AnimalsCells
    30. Tkacz ID, Gupta SK, Volkov V, Romano M, Haham T, Tulinski P, Lebenthal I, Michaeli S. Analysis of spliceosomal proteins in Trypanosomatids reveals novel functions in mRNA processing. J Biol Chem. 2010 Sep 03; 285(36):27982-99. PMID: 20592024.
      Citations: 23     Fields:    Translation:AnimalsCells
    31. Saggar R, Lynch JP, Belperio JA, Weigt SS, Derhovanessian A, Gupta S, Saggar R. Pulmonary arterial hypertension and lung transplantation. Semin Respir Crit Care Med. 2010 Apr; 31(2):147-60. PMID: 20354928.
      Citations: 5     Fields:    Translation:Humans
    32. Vazquez MP, Mualem D, Bercovich N, Stern MZ, Nyambega B, Barda O, Nasiga D, Gupta SK, Michaeli S, Levin MJ. Functional characterization and protein-protein interactions of trypanosome splicing factors U2AF35, U2AF65 and SF1. Mol Biochem Parasitol. 2009 Apr; 164(2):137-46. PMID: 19320097.
      Citations: 13     Fields:    Translation:AnimalsCells
    33. Stern MZ, Gupta SK, Salmon-Divon M, Haham T, Barda O, Levi S, Wachtel C, Nilsen TW, Michaeli S. Multiple roles for polypyrimidine tract binding (PTB) proteins in trypanosome RNA metabolism. RNA. 2009 Apr; 15(4):648-65. PMID: 19218552.
      Citations: 40     Fields:    Translation:AnimalsCells
    34. Kumria R, Sunnichan VG, Das DK, Gupta SK, Reddy VS, Bhatnagar RK, Leelavathi S. High-frequency somatic embryo production and maturation into normal plants in cotton (Gossypium hirsutum) through metabolic stress. Plant Cell Rep. 2003 Mar; 21(7):635-9. PMID: 12789412.
      Citations: 22     Fields:    Translation:Animals
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