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UMESH KARANDIKAR

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Houston, TX 77030
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Ayyar BV, Ettayebi K, Salmen W, Karandikar UC, Neill FH, Tenge VR, Crawford SE, Bieberich E, Prasad BVV, Atmar RL, Estes MK. CLIC and membrane wound repair pathways enable pandemic norovirus entry and infection. Nat Commun. 2023 02 28; 14(1):1148. PMID: 36854760; PMCID: PMC9974061.
      Citations:    Fields:    Translation:HumansCells
    2. Swaminathan G, Kamyabi N, Carter HE, Rajan A, Karandikar U, Criss ZK, Shroyer NF, Robertson MJ, Coarfa C, Huang C, Shannon TE, Tadros M, Estes MK, Maresso AW, Grande-Allen KJ, Swaminathan G, Kamyabi N, Carter HE, Rajan A, Karandikar U, Criss ZK, Shroyer NF, Robertson MJ, Coarfa C, Huang C, Shannon TE, Tadros M, Estes MK, Maresso AW, Grande-Allen KJ. Effect of substrate stiffness on human intestinal enteroids' infectivity by enteroaggregative Escherichia coli. Acta Biomater. 2021 09 15; 132:245-259. PMID: 34280559; PMCID: PMC8434991.
      Citations: 1     Fields:    Translation:HumansCells
    3. Rajan A, Robertson MJ, Carter HE, Poole NM, Clark JR, Green SI, Criss ZK, Zhao B, Karandikar U, Xing Y, Margalef-Català M, Jain N, Wilson RL, Bai F, Hyser JM, Petrosino J, Shroyer NF, Blutt SE, Coarfa C, Song X, Prasad BV, Amieva MR, Grande-Allen J, Estes MK, Okhuysen PC, Maresso AW, Rajan A, Robertson MJ, Carter HE, Poole NM, Clark JR, Green SI, Criss ZK, Zhao B, Karandikar U, Xing Y, Margalef-Català M, Jain N, Wilson RL, Bai F, Hyser JM, Petrosino J, Shroyer NF, Blutt SE, Coarfa C, Song X, Prasad BV, Amieva MR, Grande-Allen J, Estes MK, Okhuysen PC, Maresso AW, Margalef-Catal? M. Enteroaggregative E. coli Adherence to Human Heparan Sulfate Proteoglycans Drives Segment and Host Specific Responses to Infection. PLoS Pathog. 2020 09; 16(9):e1008851. PMID: 32986782; PMCID: PMC7553275.
      Citations: 12     Fields:    Translation:HumansCells
    4. Lin SC, Qu L, Ettayebi K, Crawford SE, Blutt SE, Robertson MJ, Zeng XL, Tenge VR, Ayyar BV, Karandikar UC, Yu X, Coarfa C, Atmar RL, Ramani S, Estes MK, Lin SC, Qu L, Ettayebi K, Crawford SE, Blutt SE, Robertson MJ, Zeng XL, Tenge VR, Ayyar BV, Karandikar UC, Yu X, Coarfa C, Atmar RL, Ramani S, Estes MK. Human norovirus exhibits strain-specific sensitivity to host interferon pathways in human intestinal enteroids. Proc Natl Acad Sci U S A. 2020 09 22; 117(38):23782-23793. PMID: 32907944; PMCID: PMC7519316.
      Citations: 21     Fields:    Translation:HumansCells
    5. Haga K, Ettayebi K, Tenge VR, Karandikar UC, Lewis MA, Lin SC, Neill FH, Ayyar BV, Zeng XL, Larson G, Ramani S, Atmar RL, Estes MK, Haga K, Ettayebi K, Tenge VR, Karandikar UC, Lewis MA, Lin SC, Neill FH, Ayyar BV, Zeng XL, Larson G, Ramani S, Atmar RL, Estes MK, Larson G. Genetic Manipulation of Human Intestinal Enteroids Demonstrates the Necessity of a Functional Fucosyltransferase 2 Gene for Secretor-Dependent Human Norovirus Infection. mBio. 2020 03 17; 11(2). PMID: 32184242; PMCID: PMC7078471.
      Citations: 30     Fields:    Translation:HumansCells
    6. Murakami K, Tenge VR, Karandikar UC, Lin SC, Ramani S, Ettayebi K, Crawford SE, Zeng XL, Neill FH, Ayyar BV, Katayama K, Graham DY, Bieberich E, Atmar RL, Estes MK, Murakami K, Tenge VR, Karandikar UC, Lin SC, Ramani S, Ettayebi K, Crawford SE, Zeng XL, Neill FH, Ayyar BV, Katayama K, Graham DY, Bieberich E, Atmar RL, Estes MK. Bile acids and ceramide overcome the entry restriction for GII.3 human norovirus replication in human intestinal enteroids. Proc Natl Acad Sci U S A. 2020 01 21; 117(3):1700-1710. PMID: 31896578; PMCID: PMC6983410.
      Citations: 35     Fields:    Translation:HumansCells
    7. Cardenas D, Bhalchandra S, Lamisere H, Chen Y, Zeng XL, Ramani S, Karandikar UC, Kaplan DL, Estes MK, Ward HD, Cardenas D, Bhalchandra S, Lamisere H, Chen Y, Zeng XL, Ramani S, Karandikar UC, Kaplan DL, Estes MK, Ward HD. Two- and Three-Dimensional Bioengineered Human Intestinal Tissue Models for Cryptosporidium. Methods Mol Biol. 2020; 2052:373-402. PMID: 31452173; PMCID: PMC7058245.
      Citations: 8     Fields:    Translation:HumansAnimalsCells
    8. Tapia R, Perez-Yepez EA, Carlino MJ, Karandikar UC, Kralicek SE, Estes MK, Hecht GA, Tapia R, Perez-Yepez EA, Carlino MJ, Karandikar UC, Kralicek SE, Estes MK, Hecht GA. Sperm Flagellar 1 Binds Actin in Intestinal Epithelial Cells and Contributes to Formation of Filopodia and Lamellipodia. Gastroenterology. 2019 12; 157(6):1544-1555.e3. PMID: 31473225; PMCID: PMC7016487.
      Citations:    Fields:    Translation:HumansAnimalsCells
    9. Estes MK, Ettayebi K, Tenge VR, Murakami K, Karandikar U, Lin SC, Ayyar BV, Cortes-Penfield NW, Haga K, Neill FH, Opekun AR, Broughman JR, Zeng XL, Blutt SE, Crawford SE, Ramani S, Graham DY, Atmar RL, Estes MK, Ettayebi K, Tenge VR, Murakami K, Karandikar U, Lin SC, Ayyar BV, Cortes-Penfield NW, Haga K, Neill FH, Opekun AR, Broughman JR, Zeng XL, Blutt SE, Crawford SE, Ramani S, Graham DY, Atmar RL. Human Norovirus Cultivation in Nontransformed Stem Cell-Derived Human Intestinal Enteroid Cultures: Success and Challenges. Viruses. 2019 07 11; 11(7). PMID: 31336765; PMCID: PMC6669637.
      Citations: 24     Fields:    Translation:HumansCells
    10. Chang-Graham AL, Danhof HA, Engevik MA, Tomaro-Duchesneau C, Karandikar UC, Estes MK, Versalovic J, Britton RA, Hyser JM, Chang-Graham AL, Danhof HA, Engevik MA, Tomaro-Duchesneau C, Karandikar UC, Estes MK, Versalovic J, Britton RA, Hyser JM. Human Intestinal Enteroids With Inducible Neurogenin-3 Expression as a Novel Model of Gut Hormone Secretion. Cell Mol Gastroenterol Hepatol. 2019; 8(2):209-229. PMID: 31029854; PMCID: PMC6664234.
      Citations: 33     Fields:    Translation:HumansCells
    11. Zou WY, Blutt SE, Crawford SE, Ettayebi K, Zeng XL, Saxena K, Ramani S, Karandikar UC, Zachos NC, Estes MK, Zou WY, Blutt SE, Crawford SE, Ettayebi K, Zeng XL, Saxena K, Ramani S, Karandikar UC, Zachos NC, Estes MK. Human Intestinal Enteroids: New Models to Study Gastrointestinal Virus Infections. Methods Mol Biol. 2019; 1576:229-247. PMID: 28361480; PMCID: PMC5752619.
      Citations: 65     Fields:    Translation:HumansCells
    12. Blutt SE, Broughman JR, Zou W, Zeng XL, Karandikar UC, In J, Zachos NC, Kovbasnjuk O, Donowitz M, Estes MK, Blutt SE, Broughman JR, Zou W, Zeng XL, Karandikar UC, In J, Zachos NC, Kovbasnjuk O, Donowitz M, Estes MK. Gastrointestinal microphysiological systems. Exp Biol Med (Maywood). 2017 10; 242(16):1633-1642. PMID: 28534432; PMCID: PMC5661769.
      Citations: 13     Fields:    Translation:Humans
    13. Saxena K, Simon LM, Zeng XL, Blutt SE, Crawford SE, Sastri NP, Karandikar UC, Ajami NJ, Zachos NC, Kovbasnjuk O, Donowitz M, Conner ME, Shaw CA, Estes MK, Saxena K, Simon LM, Zeng XL, Blutt SE, Crawford SE, Sastri NP, Karandikar UC, Ajami NJ, Zachos NC, Kovbasnjuk O, Donowitz M, Conner ME, Shaw CA, Estes MK. A paradox of transcriptional and functional innate interferon responses of human intestinal enteroids to enteric virus infection. Proc Natl Acad Sci U S A. 2017 01 24; 114(4):E570-E579. PMID: 28069942; PMCID: PMC5278484.
      Citations: 62     Fields:    Translation:HumansAnimalsCells
    14. Ettayebi K, Crawford SE, Murakami K, Broughman JR, Karandikar U, Tenge VR, Neill FH, Blutt SE, Zeng XL, Qu L, Kou B, Opekun AR, Burrin D, Graham DY, Ramani S, Atmar RL, Estes MK, Ettayebi K, Crawford SE, Murakami K, Broughman JR, Karandikar U, Tenge VR, Neill FH, Blutt SE, Zeng XL, Qu L, Kou B, Opekun AR, Burrin D, Graham DY, Ramani S, Atmar RL, Estes MK. Replication of human noroviruses in stem cell-derived human enteroids. Science. 2016 09 23; 353(6306):1387-1393. PMID: 27562956; PMCID: PMC5305121.
      Citations: 532     Fields:    Translation:HumansCells
    15. Karandikar UC, Crawford SE, Ajami NJ, Murakami K, Kou B, Ettayebi K, Papanicolaou GA, Jongwutiwes U, Perales MA, Shia J, Mercer D, Finegold MJ, Vinjé J, Atmar RL, Estes MK, Karandikar UC, Crawford SE, Ajami NJ, Murakami K, Kou B, Ettayebi K, Papanicolaou GA, Jongwutiwes U, Perales MA, Shia J, Mercer D, Finegold MJ, Vinjé J, Atmar RL, Estes MK, Vinj? J. Detection of human norovirus in intestinal biopsies from immunocompromised transplant patients. J Gen Virol. 2016 09; 97(9):2291-2300. PMID: 27412790; PMCID: PMC5756488.
      Citations: 48     Fields:    Translation:HumansCells
    16. Saxena K, Blutt SE, Ettayebi K, Zeng XL, Broughman JR, Crawford SE, Karandikar UC, Sastri NP, Conner ME, Opekun AR, Graham DY, Qureshi W, Sherman V, Foulke-Abel J, In J, Kovbasnjuk O, Zachos NC, Donowitz M, Estes MK, Saxena K, Blutt SE, Ettayebi K, Zeng XL, Broughman JR, Crawford SE, Karandikar UC, Sastri NP, Conner ME, Opekun AR, Graham DY, Qureshi W, Sherman V, Foulke-Abel J, In J, Kovbasnjuk O, Zachos NC, Donowitz M, Estes MK. Human Intestinal Enteroids: a New Model To Study Human Rotavirus Infection, Host Restriction, and Pathophysiology. J Virol. 2016 01 01; 90(1):43-56. PMID: 26446608; PMCID: PMC4702582.
      Citations: 177     Fields:    Translation:HumansCells
    17. Jusiak B, Wang F, Karandikar UC, Kwak SJ, Wang H, Chen R, Mardon G, Jusiak B, Wang F, Karandikar UC, Kwak SJ, Wang H, Chen R, Mardon G. Genome-wide DNA binding pattern of the homeodomain transcription factor Sine oculis (So) in the developing eye of Drosophila melanogaster. Genom Data. 2014 Dec 01; 2:153-155. PMID: 25126519; PMCID: PMC4128500.
      Citations: 10     
    18. Karandikar UC, Jin M, Jusiak B, Kwak S, Chen R, Mardon G, Karandikar UC, Jin M, Jusiak B, Kwak S, Chen R, Mardon G. Drosophila eyes absent is required for normal cone and pigment cell development. PLoS One. 2014; 9(7):e102143. PMID: 25057928; PMCID: PMC4109927.
      Citations: 12     Fields:    Translation:AnimalsCells
    19. Jusiak B, Karandikar UC, Kwak SJ, Wang F, Wang H, Chen R, Mardon G, Jusiak B, Karandikar UC, Kwak SJ, Wang F, Wang H, Chen R, Mardon G. Regulation of Drosophila eye development by the transcription factor Sine oculis. PLoS One. 2014; 9(2):e89695. PMID: 24586968; PMCID: PMC3934907.
      Citations: 19     Fields:    Translation:Animals
    20. Li Y, Jiang Y, Chen Y, Karandikar U, Hoffman K, Chattopadhyay A, Mardon G, Chen R, Li Y, Jiang Y, Chen Y, Karandikar U, Hoffman K, Chattopadhyay A, Mardon G, Chen R. optix functions as a link between the retinal determination network and the dpp pathway to control morphogenetic furrow progression in Drosophila. Dev Biol. 2013 Sep 01; 381(1):50-61. PMID: 23792115; PMCID: PMC3742619.
      Citations: 8     Fields:    Translation:AnimalsCells
    21. Anderson AE, Karandikar UC, Pepple KL, Chen Z, Bergmann A, Mardon G, Anderson AE, Karandikar UC, Pepple KL, Chen Z, Bergmann A, Mardon G, Anderson AE. The enhancer of trithorax and polycomb gene Caf1/p55 is essential for cell survival and patterning in Drosophila development. Development. 2011 May; 138(10):1957-66. PMID: 21490066; PMCID: PMC3082301.
      Citations: 19     Fields:    Translation:HumansAnimalsCells
    22. Kahali B, Kim JE, Karandikar U, Bishop CP, Bidwai AP, Kahali B, Kim JE, Karandikar U, Bishop CP, Bidwai AP. Evidence that the C-terminal domain (CtD) autoinhibits neural repression by Drosophila E(spl)M8. Genesis. 2010 Jan; 48(1):44-55. PMID: 20014344.
      Citations: 6     Fields:    Translation:AnimalsCells
    23. Kahali B, Bose A, Karandikar U, Bishop CP, Bidwai AP, Kahali B, Bose A, Karandikar U, Bishop CP, Bidwai AP. On the mechanism underlying the divergent retinal and bristle defects of M8* (E(spl)D) in Drosophila. Genesis. 2009 Jul; 47(7):456-68. PMID: 19415625; PMCID: PMC2777619.
      Citations: 6     Fields:    Translation:AnimalsCells
    24. Kuntamalla PP, Kunttas-Tatli E, Karandikar U, Bishop CP, Bidwai AP, Kuntamalla PP, Kunttas-Tatli E, Karandikar U, Bishop CP, Bidwai AP. Drosophila protein kinase CK2 is rendered temperature-sensitive by mutations of highly conserved residues flanking the activation segment. Mol Cell Biochem. 2009 Mar; 323(1-2):49-60. PMID: 19039653; PMCID: PMC2777608.
      Citations: 9     Fields:    Translation:HumansAnimalsCells
    25. Bose A, Kahali B, Zhang S, Lin JM, Allada R, Karandikar U, Bidwai AP, Bose A, Kahali B, Zhang S, Lin JM, Allada R, Karandikar U, Bidwai AP. Drosophila CK2 regulates lateral-inhibition during eye and bristle development. Mech Dev. 2006 Sep; 123(9):649-64. PMID: 16930955.
      Citations: 14     Fields:    Translation:AnimalsCells
    26. Shaffer JM, Karandikar UC, Bidwai AP, Shaffer JM, Karandikar UC, Bidwai AP. An activity-based two-hybrid system for the selective identification of substrates of protein kinases. Anal Biochem. 2006 Aug 01; 355(1):154-6. PMID: 16712765.
      Citations:    Fields:    Translation:AnimalsCells
    27. Goldstein RE, Cook O, Dinur T, Pisanté A, Karandikar UC, Bidwai A, Paroush Z, Goldstein RE, Cook O, Dinur T, Pisanté A, Karandikar UC, Bidwai A, Paroush Z, Pisant? A. An eh1-like motif in odd-skipped mediates recruitment of Groucho and repression in vivo. Mol Cell Biol. 2005 Dec; 25(24):10711-20. PMID: 16314497; PMCID: PMC1316973.
      Citations: 27     Fields:    Translation:AnimalsCells
    28. Karandikar UC, Shaffer J, Bishop CP, Bidwai AP, Karandikar UC, Shaffer J, Bishop CP, Bidwai AP. Drosophila CK2 phosphorylates Deadpan, a member of the HES family of basic-helix-loop-helix (bHLH) repressors. Mol Cell Biochem. 2005 Jun; 274(1-2):133-9. PMID: 16342413.
      Citations: 1     Fields:    Translation:AnimalsCells
    29. Karandikar UC, Trott RL, Yin J, Bishop CP, Bidwai AP, Karandikar UC, Trott RL, Yin J, Bishop CP, Bidwai AP. Drosophila CK2 regulates eye morphogenesis via phosphorylation of E(spl)M8. Mech Dev. 2004 Mar; 121(3):273-86. PMID: 15003630.
      Citations: 16     Fields:    Translation:AnimalsCells
    30. Karandikar U, Anderson S, Mason N, Trott RL, Bishop CP, Bidwai AP, Karandikar U, Anderson S, Mason N, Trott RL, Bishop CP, Bidwai AP. The Drosophila SSL gene is expressed in larvae, pupae, and adults, exhibits sexual dimorphism, and mimics properties of the beta subunit of casein kinase II. Biochem Biophys Res Commun. 2003 Feb 21; 301(4):941-7. PMID: 12589803.
      Citations: 4     Fields:    Translation:AnimalsCells
    31. Trott RL, Kalive M, Karandikar U, Rummer R, Bishop CP, Bidwai AP, Trott RL, Kalive M, Karandikar U, Rummer R, Bishop CP, Bidwai AP. Identification and characterization of proteins that interact with Drosophila melanogaster protein kinase CK2. Mol Cell Biochem. 2001 Nov; 227(1-2):91-8. PMID: 11827179.
      Citations: 6     Fields:    Translation:AnimalsCells
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