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Zhou Songyang

TitleProfessor
InstitutionBaylor College of Medicine
DepartmentDepartment of Biochemistry & Molecular Biology
DivisionBiochemistry & Molecular Biology
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    Other Positions
    TitleProfessor
    InstitutionBaylor College of Medicine
    DepartmentDepartment of Pharmacology and Chemical Biology
    DivisionPharmacology


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    R01CA084208     (SONGYANG, ZHOU)Jan 5, 2001 - Dec 31, 2006
    NIH/NCI
    BIOCHEMICAL GENETIC STUDIES OF CELL SURVIVAL PATHWAYS
    Role: Principal Investigator

    R01GM069572     (SONGYANG, ZHOU)Feb 1, 2004 - Jan 31, 2009
    NIH/NIGMS
    Hematopoietic Cell Survival by Protein Kinase CISK
    Role: Principal Investigator

    R01CA133249     (SONGYANG, ZHOU)Apr 1, 2008 - Jan 31, 2014
    NIH/NCI
    Mechanism and Consequences of Telomere Dysfunction
    Role: Principal Investigator

    R01GM095599     (SONGYANG, ZHOU)Aug 1, 2011 - Jul 31, 2015
    NIH/NIGMS
    Defining the human telomere signaling networks and their implication in cancer
    Role: Principal Investigator

    R01CA211653     (SONGYANG, ZHOU)Jan 1, 2017 - Dec 31, 2021
    NIH/NCI
    THE ROLE OF TELOMERASE REGULATORS IN TELOMERE MAINTENANCE AND GENOMIC INSTABILITY
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Xu M, Qin J, Wang L, Lee HJ, Kao CY, Liu D, Songyang Z, Chen J, Tsai MJ, Tsai SY. Nuclear receptors regulate alternative lengthening of telomeres through a novel noncanonical FANCD2 pathway. Sci Adv. 2019 Oct; 5(10):eaax6366. PMID: 31633027.
      View in: PubMed
    2. Li F, Ge Y, Liu D, Songyang Z. The role of telomere-binding modulators in pluripotent stem cells. Protein Cell. 2019 Jul 27. PMID: 31350723.
      View in: PubMed
    3. Luo Z, Wang W, Li F, Songyang Z, Feng X, Xin C, Dai Z, Xiong Y. Pan-cancer analysis identifies telomerase-associated signatures and cancer subtypes. Mol Cancer. 2019 06 10; 18(1):106. PMID: 31179925.
      View in: PubMed
    4. Lu W, Yu J, Shi F, Zhang J, Huang R, Yin S, Songyang Z, Huang J. The long non-coding RNA Snhg3 is essential for mouse embryonic stem cell self-renewal and pluripotency. Stem Cell Res Ther. 2019 May 31; 10(1):157. PMID: 31151411.
      View in: PubMed
    5. Zhu J, Xu M, Liu Y, Zhuang L, Ying K, Liu F, Liu D, Ma W, Songyang Z. Phosphorylation of PLIN3 by AMPK promotes dispersion of lipid droplets during starvation. Protein Cell. 2019 05; 10(5):382-387. PMID: 30430421.
      View in: PubMed
    6. Yu J, Lu W, Ge T, Huang R, Chen B, Ye M, Bai Y, Shi G, Songyang Z, Ma W, Huang J. Interaction Between Sympk and Oct4 Promotes Mouse Embryonic Stem Cell Proliferation. Stem Cells. 2019 06; 37(6):743-753. PMID: 30801858.
      View in: PubMed
    7. Deng T, Huang Y, Weng K, Lin S, Li Y, Shi G, Chen Y, Huang J, Liu D, Ma W, Songyang Z. TOE1 acts as a 3' exonuclease for telomerase RNA and regulates telomere maintenance. Nucleic Acids Res. 2019 01 10; 47(1):391-405. PMID: 30371886.
      View in: PubMed
    8. Liang P, Xie X, Zhi S, Sun H, Zhang X, Chen Y, Chen Y, Xiong Y, Ma W, Liu D, Huang J, Songyang Z. Genome-wide profiling of adenine base editor specificity by EndoV-seq. Nat Commun. 2019 01 08; 10(1):67. PMID: 30622278.
      View in: PubMed
    9. Liang P, Sun H, Zhang X, Xie X, Zhang J, Bai Y, Ouyang X, Zhi S, Xiong Y, Ma W, Liu D, Huang J, Songyang Z. Effective and precise adenine base editing in mouse zygotes. Protein Cell. 2018 09; 9(9):808-813. PMID: 30066231.
      View in: PubMed
    10. Tummala H, Collopy LC, Walne AJ, Ellison A, Cardoso S, Aksu T, Yarali N, Aslan D, Fikret Akata R, Teo J, Songyang Z, Pontikos N, Fitzgibbon J, Tomita K, Vulliamy T, Dokal I. Homozygous OB-fold variants in telomere protein TPP1 are associated with dyskeratosis congenita-like phenotypes. Blood. 2018 09 20; 132(12):1349-1353. PMID: 30064976.
      View in: PubMed
    11. Tang H, Wang H, Cheng X, Fan X, Yang F, Zhang M, Chen Y, Tian Y, Liu C, Shao D, Jiang B, Dou Y, Cong Y, Xing J, Zhang X, Yi X, Songyang Z, Ma W, Zhao Y, Wang X, Ma J, Gorospe M, Ju Z, Wang W. Author Correction: HuR regulates telomerase activity through TERC methylation. Nat Commun. 2018 07 10; 9(1):2721. PMID: 29988036.
      View in: PubMed
    12. Wang M, Zhang S, Zheng G, Huang J, Songyang Z, Zhao X, Lin X. Gain-of-Function Mutation of Card14 Leads to Spontaneous Psoriasis-like Skin Inflammation through Enhanced Keratinocyte Response to IL-17A. Immunity. 2018 07 17; 49(1):66-79.e5. PMID: 29980436.
      View in: PubMed
    13. Tang H, Wang H, Cheng X, Fan X, Yang F, Zhang M, Chen Y, Tian Y, Liu C, Shao D, Jiang B, Dou Y, Cong Y, Xing J, Zhang X, Yi X, Songyang Z, Ma W, Zhao Y, Wang X, Ma J, Gorospe M, Ju Z, Wang W. HuR regulates telomerase activity through TERC methylation. Nat Commun. 2018 06 07; 9(1):2213. PMID: 29880812.
      View in: PubMed
    14. Li F, Kim H, Ji Z, Zhang T, Chen B, Ge Y, Hu Y, Feng X, Han X, Xu H, Zhang Y, Yu H, Liu D, Ma W, Songyang Z. The BUB3-BUB1 Complex Promotes Telomere DNA Replication. Mol Cell. 2018 05 03; 70(3):395-407.e4. PMID: 29727616.
      View in: PubMed
    15. Zhang Z, Wan T, Chen Y, Chen Y, Sun H, Cao T, Songyang Z, Tang G, Wu C, Ping Y, Xu FJ, Huang J. Cationic Polymer-Mediated CRISPR/Cas9 Plasmid Delivery for Genome Editing. Macromol Rapid Commun. 2019 Mar; 40(5):e1800068. PMID: 29708298.
      View in: PubMed
    16. Zhang Z, Sun H, Chen Y, Cao T, Songyang Z, Huang J, Huang Y. Analysis of hpf1 expression and function in early embryonic development of zebrafish. Dev Genes Evol. 2018 03; 228(2):141-147. PMID: 29549427.
      View in: PubMed
    17. Liu Y, Liu F, Cao Y, Xu H, Wu Y, Wu S, Liu D, Zhao Y, Songyang Z, Ma W. Shwachman-Diamond Syndrome Protein SBDS Maintains Human Telomeres by Regulating Telomerase Recruitment. Cell Rep. 2018 02 13; 22(7):1849-1860. PMID: 29444436.
      View in: PubMed
    18. Zhou Z, Li M, Zhang L, Zhao H, Sahin Ö, Chen J, Zhao JJ, Songyang Z, Yu D. Oncogenic Kinase-Induced PKM2 Tyrosine 105 Phosphorylation Converts Nononcogenic PKM2 to a Tumor Promoter and Induces Cancer Stem-like Cells. Cancer Res. 2018 05 01; 78(9):2248-2261. PMID: 29440169.
      View in: PubMed
    19. Feng J, Liang P, Chen Y, Zhang X, Songyang Z, Zheng H, Cao S, Huang J. Testis-specific Lypd9 is dispensable for spermatogenesis in mouse. Mol Reprod Dev. 2018 02; 85(2):87-89. PMID: 29247571.
      View in: PubMed
    20. Xiong Y, Xie X, Wang Y, Ma W, Liang P, Songyang Z, Dai Z. pgRNAFinder: a web-based tool to design distance independent paired-gRNA. Bioinformatics. 2017 Nov 15; 33(22):3642-3644. PMID: 28961776.
      View in: PubMed
    21. Kim H, Li F, He Q, Deng T, Xu J, Jin F, Coarfa C, Putluri N, Liu D, Songyang Z. Systematic analysis of human telomeric dysfunction using inducible telosome/shelterin CRISPR/Cas9 knockout cells. Cell Discov. 2017; 3:17034. PMID: 28955502.
      View in: PubMed
    22. Miao Y, Zhang H, Pan Y, Ren J, Ye M, Xia F, Huang R, Lin Z, Jiang S, Zhang Y, Songyang Z, Zhang Y. Single-walled carbon nanotube: One specific inhibitor of cancer stem cells in osteosarcoma upon downregulation of the TGFß1 signaling. Biomaterials. 2017 Dec; 149:29-40. PMID: 28988062.
      View in: PubMed
    23. Liang P, Ding C, Sun H, Xie X, Xu Y, Zhang X, Sun Y, Xiong Y, Ma W, Liu Y, Wang Y, Fang J, Liu D, Songyang Z, Zhou C, Huang J. Correction of ß-thalassemia mutant by base editor in human embryos. Protein Cell. 2017 Nov; 8(11):811-822. PMID: 28942539.
      View in: PubMed
    24. Chen Y, Liang P, Huang Y, Li M, Zhang X, Ding C, Feng J, Zhang Z, Zhang X, Gao Y, Zhang Q, Cao S, Zheng H, Liu D, Songyang Z, Huang J. Glycerol kinase-like proteins cooperate with Pld6 in regulating sperm mitochondrial sheath formation and male fertility. Cell Discov. 2017; 3:17030. PMID: 28852571.
      View in: PubMed
    25. Zhang T, Zhang Z, Li F, Hu Q, Liu H, Tang M, Ma W, Huang J, Songyang Z, Rong Y, Zhang S, Chen BP, Zhao Y. Looping-out mechanism for resolution of replicative stress at telomeres. EMBO Rep. 2017 08; 18(8):1412-1428. PMID: 28615293.
      View in: PubMed
    26. Liang P, Sun H, Sun Y, Zhang X, Xie X, Zhang J, Zhang Z, Chen Y, Ding C, Xiong Y, Ma W, Liu D, Huang J, Songyang Z. Effective gene editing by high-fidelity base editor 2 in mouse zygotes. Protein Cell. 2017 Aug; 8(8):601-611. PMID: 28585179.
      View in: PubMed
    27. Huang D, Lu W, Zou S, Wang H, Jiang Y, Zhang X, Li P, Songyang Z, Wang L, Wang J, Huang J, Fang L. Rho GDP-dissociation inhibitor a is a potential prognostic biomarker and controls telomere regulation in colorectal cancer. Cancer Sci. 2017 Jul; 108(7):1293-1302. PMID: 28417530.
      View in: PubMed
    28. Burgess S, Cheng L, Gu F, Huang J, Huang Z, Lin S, Li J, Li W, Qin W, Sun Y, Songyang Z, Wei W, Wu Q, Wang H, Wang X, Xiong JW, Xi J, Yang H, Zhou B, Zhang B. Erratum to: Questions about NgAgo. Protein Cell. 2017 01; 8(1):77. PMID: 27913985.
      View in: PubMed
    29. Xu J, Songyang Z, Liu D, Kim H. Analysis of Average Telomere Length in Human Telomeric Protein Knockout Cells Generated by CRISPR/Cas9. Methods Mol Biol. 2017; 1587:15-28. PMID: 28324494.
      View in: PubMed
    30. Songyang Z. Introduction to Telomeres and Telomerase. Methods Mol Biol. 2017; 1587:1-13. PMID: 28324493.
      View in: PubMed
    31. Ma W, Lee OH, Kim H, Songyang Z. Using Protein-Fragment Complementation Assays (PCA) and Peptide Arrays to Study Telomeric Protein-Protein Interactions. Methods Mol Biol. 2017; 1587:147-160. PMID: 28324507.
      View in: PubMed
    32. Burgess S, Cheng L, Gu F, Huang J, Huang Z, Lin S, Li J, Li W, Qin W, Sun Y, Songyang Z, Wei W, Wu Q, Wang H, Wang X, Xiong JW, Xi J, Yang H, Zhou B, Zhang B. Questions about NgAgo. Protein Cell. 2016 12; 7(12):913-915. PMID: 27848216.
      View in: PubMed
    33. Lin Z, Bao J, Kong Q, Bai Y, Luo F, Songyang Z, Wu Y, Huang J. Effective production of recipient male pigs for spermatogonial stem cell transplantation by intratesticular injection with busulfan. Theriogenology. 2017 Feb; 89:365-373.e2. PMID: 27919445.
      View in: PubMed
    34. Sun C, Wang G, Wrighton KH, Lin H, Songyang Z, Feng XH, Lin X. Regulation of p27Kip1 phosphorylation and G1 cell cycle progression by protein phosphatase PPM1G. Am J Cancer Res. 2016; 6(10):2207-2220. PMID: 27822412.
      View in: PubMed
    35. Yin S, Huang Y, Zhangfang Y, Zhong X, Li P, Huang J, Liu D, Songyang Z. SmedOB1 is Required for Planarian Homeostasis and Regeneration. Sci Rep. 2016 Sep 22; 6:34013. PMID: 27654173.
      View in: PubMed
    36. Zhang X, Liang P, Ding C, Zhang Z, Zhou J, Xie X, Huang R, Sun Y, Sun H, Zhang J, Xu Y, Songyang Z, Huang J. Efficient Production of Gene-Modified Mice using Staphylococcus aureus Cas9. Sci Rep. 2016 09 02; 6:32565. PMID: 27586692.
      View in: PubMed
    37. Hu Y, Shi G, Zhang L, Li F, Jiang Y, Jiang S, Ma W, Zhao Y, Songyang Z, Huang J. Switch telomerase to ALT mechanism by inducing telomeric DNA damages and dysfunction of ATRX and DAXX. Sci Rep. 2016 08 31; 6:32280. PMID: 27578458.
      View in: PubMed
    38. Huang Y, Chen B, Ye M, Liang P, Zhangfang Y, Huang J, Liu M, Songyang Z, Ma W. Ccndbp1 is a new positive regulator of skeletal myogenesis. J Cell Sci. 2016 07 15; 129(14):2767-77. PMID: 27235421.
      View in: PubMed
    39. Xie X, Ma W, Songyang Z, Luo Z, Huang J, Dai Z, Xiong Y. CCSI: a database providing chromatin-chromatin spatial interaction information. Database (Oxford). 2016; 2016. PMID: 26868054.
      View in: PubMed
    40. Huang Y, Xiong Y, Lin Z, Feng X, Jiang X, Songyang Z, Huang J. Specific Tandem 3'UTR Patterns and Gene Expression Profiles in Mouse Thy1+ Germline Stem Cells. PLoS One. 2015; 10(12):e0145417. PMID: 26713853.
      View in: PubMed
    41. Zhang Y, Wu Y, Mao P, Li F, Han X, Zhang Y, Jiang S, Chen Y, Huang J, Liu D, Zhao Y, Ma W, Songyang Z. Cold-inducible RNA-binding protein CIRP/hnRNP A18 regulates telomerase activity in a temperature-dependent manner. Nucleic Acids Res. 2016 Jan 29; 44(2):761-75. PMID: 26673712.
      View in: PubMed
    42. Li M, Huang R, Jiang X, Chen Y, Zhang Z, Zhang X, Liang P, Zhan S, Cao S, Songyang Z, Huang J. CRISPR/Cas9 Promotes Functional Study of Testis Specific X-Linked Gene In Vivo. PLoS One. 2015; 10(11):e0143148. PMID: 26599493.
      View in: PubMed
    43. He Q, Kim H, Huang R, Lu W, Tang M, Shi F, Yang D, Zhang X, Huang J, Liu D, Songyang Z. The Daxx/Atrx Complex Protects Tandem Repetitive Elements during DNA Hypomethylation by Promoting H3K9 Trimethylation. Cell Stem Cell. 2015 Sep 03; 17(3):273-86. PMID: 26340527.
      View in: PubMed
    44. Lu W, Fang L, Ouyang B, Zhang X, Zhan S, Feng X, Bai Y, Han X, Kim H, He Q, Wan M, Shi FT, Feng XH, Liu D, Huang J, Songyang Z. Actl6a protects embryonic stem cells from differentiating into primitive endoderm. Stem Cells. 2015 Jun; 33(6):1782-93. PMID: 25802002.
      View in: PubMed
    45. Liang P, Xu Y, Zhang X, Ding C, Huang R, Zhang Z, Lv J, Xie X, Chen Y, Li Y, Sun Y, Bai Y, Songyang Z, Ma W, Zhou C, Huang J. CRISPR/Cas9-mediated gene editing in human tripronuclear zygotes. Protein Cell. 2015 May; 6(5):363-372. PMID: 25894090.
      View in: PubMed
    46. Luo Z, Dai Z, Xie X, Feng X, Liu D, Songyang Z, Xiong Y. TeloPIN: a database of telomeric proteins interaction network in mammalian cells. Database (Oxford). 2015; 2015. PMID: 25792605.
      View in: PubMed
    47. Luo Z, Feng X, Wang H, Xu W, Zhao Y, Ma W, Jiang S, Liu D, Huang J, Songyang Z. Mir-23a induces telomere dysfunction and cellular senescence by inhibiting TRF2 expression. Aging Cell. 2015 Jun; 14(3):391-9. PMID: 25753893.
      View in: PubMed
    48. Li N, Zhang Y, Han X, Liang K, Wang J, Feng L, Wang W, Songyang Z, Lin C, Yang L, Yu Y, Chen J. Poly-ADP ribosylation of PTEN by tankyrases promotes PTEN degradation and tumor growth. Genes Dev. 2015 Jan 15; 29(2):157-70. PMID: 25547115.
      View in: PubMed
    49. Chen Y, Deng Z, Jiang S, Hu Q, Liu H, Songyang Z, Ma W, Chen S, Zhao Y. Human cells lacking coilin and Cajal bodies are proficient in telomerase assembly, trafficking and telomere maintenance. Nucleic Acids Res. 2015 Jan; 43(1):385-95. PMID: 25477378.
      View in: PubMed
    50. Tang M, Li Y, Zhang Y, Chen Y, Huang W, Wang D, Zaug AJ, Liu D, Zhao Y, Cech TR, Ma W, Songyang Z. Disease mutant analysis identifies a new function of DAXX in telomerase regulation and telomere maintenance. J Cell Sci. 2015 Jan 15; 128(2):331-41. PMID: 25416818.
      View in: PubMed
    51. Lee OH, Lee J, Lee KH, Woo YM, Kang JH, Yoon HG, Bae SK, Songyang Z, Oh SH, Choi Y. Role of the focal adhesion protein TRIM15 in colon cancer development. Biochim Biophys Acta. 2015 Feb; 1853(2):409-21. PMID: 25450970.
      View in: PubMed
    52. Tang M, Li Y, Zhang X, Deng T, Zhou Z, Ma W, Songyang Z. Structural maintenance of chromosomes flexible hinge domain containing 1 (SMCHD1) promotes non-homologous end joining and inhibits homologous recombination repair upon DNA damage. J Biol Chem. 2014 Dec 05; 289(49):34024-32. PMID: 25294876.
      View in: PubMed
    53. Zhou G, Wang J, Zhao M, Xie TX, Tanaka N, Sano D, Patel AA, Ward AM, Sandulache VC, Jasser SA, Skinner HD, Fitzgerald AL, Osman AA, Wei Y, Xia X, Songyang Z, Mills GB, Hung MC, Caulin C, Liang J, Myers JN. Gain-of-function mutant p53 promotes cell growth and cancer cell metabolism via inhibition of AMPK activation. Mol Cell. 2014 Jun 19; 54(6):960-74. PMID: 24857548.
      View in: PubMed
    54. Ouyang B, Sun X, Han D, Chen S, Yao B, Gao Y, Bian J, Huang Y, Zhang Y, Wan Z, Yang B, Xiao H, Songyang Z, Liu G, Zhang Y, Deng C. Human urine-derived stem cells alone or genetically-modified with FGF2 Improve type 2 diabetic erectile dysfunction in a rat model. PLoS One. 2014; 9(3):e92825. PMID: 24663037.
      View in: PubMed
    55. Li Y, Fong KW, Tang M, Han X, Gong Z, Ma W, Hebert M, Songyang Z, Chen J. Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J Cell Sci. 2014 May 01; 127(Pt 9):2029-39. PMID: 24569877.
      View in: PubMed
    56. Huang Y, Liang P, Liu D, Huang J, Songyang Z. Telomere regulation in pluripotent stem cells. Protein Cell. 2014 Mar; 5(3):194-202. PMID: 24563217.
      View in: PubMed
    57. Liu Y, Kim H, Liang J, Lu W, Ouyang B, Liu D, Songyang Z. The death-inducer obliterator 1 (Dido1) gene regulates embryonic stem cell self-renewal. J Biol Chem. 2014 Feb 21; 289(8):4778-86. PMID: 24347171.
      View in: PubMed
    58. Fong KW, Li Y, Wang W, Ma W, Li K, Qi RZ, Liu D, Songyang Z, Chen J. Whole-genome screening identifies proteins localized to distinct nuclear bodies. J Cell Biol. 2013 Oct 14; 203(1):149-64. PMID: 24127217.
      View in: PubMed
    59. Han X, Liu D, Zhang Y, Li Y, Lu W, Chen J, Songyang Z. Akt regulates TPP1 homodimerization and telomere protection. Aging Cell. 2013 Dec; 12(6):1091-9. PMID: 23862686.
      View in: PubMed
    60. Zhou P, Xu W, Peng X, Luo Z, Xing Q, Chen X, Hou C, Liang W, Zhou J, Wu X, Songyang Z, Jiang S. Large-scale screens of miRNA-mRNA interactions unveiled that the 3'UTR of a gene is targeted by multiple miRNAs. PLoS One. 2013; 8(7):e68204. PMID: 23874542.
      View in: PubMed
    61. Feng X, Luo Z, Jiang S, Li F, Han X, Hu Y, Wang D, Zhao Y, Ma W, Liu D, Huang J, Songyang Z. The telomere-associated homeobox-containing protein TAH1/HMBOX1 participates in telomere maintenance in ALT cells. J Cell Sci. 2013 Sep 01; 126(Pt 17):3982-9. PMID: 23813958.
      View in: PubMed
    62. Shi FT, Kim H, Lu W, He Q, Liu D, Goodell MA, Wan M, Songyang Z. Ten-eleven translocation 1 (Tet1) is regulated by O-linked N-acetylglucosamine transferase (Ogt) for target gene repression in mouse embryonic stem cells. J Biol Chem. 2013 Jul 19; 288(29):20776-84. PMID: 23729667.
      View in: PubMed
    63. Zhang Y, Chen LY, Han X, Xie W, Kim H, Yang D, Liu D, Songyang Z. Phosphorylation of TPP1 regulates cell cycle-dependent telomerase recruitment. Proc Natl Acad Sci U S A. 2013 Apr 02; 110(14):5457-62. PMID: 23509301.
      View in: PubMed
    64. Fong KW, Leung JW, Li Y, Wang W, Feng L, Ma W, Liu D, Songyang Z, Chen J. MTR120/KIAA1383, a novel microtubule-associated protein, promotes microtubule stability and ensures cytokinesis. J Cell Sci. 2013 Feb 01; 126(Pt 3):825-37. PMID: 23264731.
      View in: PubMed
    65. Wan M, Liang J, Xiong Y, Shi F, Zhang Y, Lu W, He Q, Yang D, Chen R, Liu D, Barton M, Songyang Z. The trithorax group protein Ash2l is essential for pluripotency and maintaining open chromatin in embryonic stem cells. J Biol Chem. 2013 Feb 15; 288(7):5039-48. PMID: 23239880.
      View in: PubMed
    66. Lu W, Zhang Y, Liu D, Songyang Z, Wan M. Telomeres-structure, function, and regulation. Exp Cell Res. 2013 Jan 15; 319(2):133-41. PMID: 23006819.
      View in: PubMed
    67. Chen LY, Zhang Y, Zhang Q, Li H, Luo Z, Fang H, Kim SH, Qin L, Yotnda P, Xu J, Tu BP, Bai Y, Songyang Z. Mitochondrial localization of telomeric protein TIN2 links telomere regulation to metabolic control. Mol Cell. 2012 Sep 28; 47(6):839-50. PMID: 22885005.
      View in: PubMed
    68. Song C, Ye M, Liu Z, Cheng H, Jiang X, Han G, Songyang Z, Tan Y, Wang H, Ren J, Xue Y, Zou H. Systematic analysis of protein phosphorylation networks from phosphoproteomic data. Mol Cell Proteomics. 2012 Oct; 11(10):1070-83. PMID: 22798277.
      View in: PubMed
    69. Cui J, Li Y, Zhu L, Liu D, Songyang Z, Wang HY, Wang RF. NLRP4 negatively regulates type I interferon signaling by targeting the kinase TBK1 for degradation via the ubiquitin ligase DTX4. Nat Immunol. 2012 Mar 04; 13(4):387-95. PMID: 22388039.
      View in: PubMed
    70. Zheng ZY, Cheng CM, Fu XR, Chen LY, Xu L, Terrillon S, Wong ST, Bar-Sagi D, Songyang Z, Chang EC. CHMP6 and VPS4A mediate the recycling of Ras to the plasma membrane to promote growth factor signaling. Oncogene. 2012 Oct 25; 31(43):4630-8. PMID: 22231449.
      View in: PubMed
    71. Xia X, Cui J, Wang HY, Zhu L, Matsueda S, Wang Q, Yang X, Hong J, Songyang Z, Chen ZJ, Wang RF. NLRX1 negatively regulates TLR-induced NF-?B signaling by targeting TRAF6 and IKK. Immunity. 2011 Jun 24; 34(6):843-53. PMID: 21703539.
      View in: PubMed
    72. King KY, Baldridge MT, Weksberg DC, Chambers SM, Lukov GL, Wu S, Boles NC, Jung SY, Qin J, Liu D, Songyang Z, Eissa NT, Taylor GA, Goodell MA. Irgm1 protects hematopoietic stem cells by negative regulation of IFN signaling. Blood. 2011 Aug 11; 118(6):1525-33. PMID: 21633090.
      View in: PubMed
    73. Yang D, He Q, Kim H, Ma W, Songyang Z. TIN2 protein dyskeratosis congenita missense mutants are defective in association with telomerase. J Biol Chem. 2011 Jul 01; 286(26):23022-30. PMID: 21536674.
      View in: PubMed
    74. Yang D, Xiong Y, Kim H, He Q, Li Y, Chen R, Songyang Z. Human telomeric proteins occupy selective interstitial sites. Cell Res. 2011 Jul; 21(7):1013-27. PMID: 21423278.
      View in: PubMed
    75. Flynn RL, Centore RC, O'Sullivan RJ, Rai R, Tse A, Songyang Z, Chang S, Karlseder J, Zou L. TERRA and hnRNPA1 orchestrate an RPA-to-POT1 switch on telomeric single-stranded DNA. Nature. 2011 Mar 24; 471(7339):532-6. PMID: 21399625.
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    76. Xie Y, Yang D, He Q, Songyang Z. Zebrafish as a model system to study the physiological function of telomeric protein TPP1. PLoS One. 2011 Feb 02; 6(2):e16440. PMID: 21311760.
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    77. Songyang Z. Introduction to telomeres and telomerase. Methods Mol Biol. 2011; 735:1-11. PMID: 21461806.
      View in: PubMed
    78. Ma W, Kim H, Songyang Z. Studying of telomeric protein-protein interactions by Bi-molecular fluorescence complementation (BiFC) and peptide array-based assays. Methods Mol Biol. 2011; 735:161-71. PMID: 21461821.
      View in: PubMed
    79. Lee OH, Kim H, He Q, Baek HJ, Yang D, Chen LY, Liang J, Chae HK, Safari A, Liu D, Songyang Z. Genome-wide YFP fluorescence complementation screen identifies new regulators for telomere signaling in human cells. Mol Cell Proteomics. 2011 Feb; 10(2):M110.001628. PMID: 21044950.
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    80. Wu W, Hsu YM, Bi L, Songyang Z, Lin X. CARD9 facilitates microbe-elicited production of reactive oxygen species by regulating the LyGDI-Rac1 complex. Nat Immunol. 2009 Nov; 10(11):1208-14. PMID: 19767757.
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    81. Wang Z, Wang B, Yang L, Guo Q, Aithmitti N, Songyang Z, Zheng H. Presynaptic and postsynaptic interaction of the amyloid precursor protein promotes peripheral and central synaptogenesis. J Neurosci. 2009 Sep 02; 29(35):10788-801. PMID: 19726636.
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    82. Wan M, Qin J, Songyang Z, Liu D. OB fold-containing protein 1 (OBFC1), a human homolog of yeast Stn1, associates with TPP1 and is implicated in telomere length regulation. J Biol Chem. 2009 Sep 25; 284(39):26725-31. PMID: 19648609.
      View in: PubMed
    83. Xu J, Liao L, Qin J, Xu J, Liu D, Songyang Z. Identification of Flightless-I as a substrate of the cytokine-independent survival kinase CISK. J Biol Chem. 2009 May 22; 284(21):14377-85. PMID: 19293151.
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    84. Kim H, Lee OH, Xin H, Chen LY, Qin J, Chae HK, Lin SY, Safari A, Liu D, Songyang Z. TRF2 functions as a protein hub and regulates telomere maintenance by recognizing specific peptide motifs. Nat Struct Mol Biol. 2009 Apr; 16(4):372-9. PMID: 19287395.
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    85. Liu D, Songyang Z. Genetic mapping of anti-apoptosis pathways in myeloid progenitor cells. Methods Mol Biol. 2009; 559:283-91. PMID: 19609764.
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    86. Xin H, Liu D, Songyang Z. The telosome/shelterin complex and its functions. Genome Biol. 2008; 9(9):232. PMID: 18828880.
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    87. Dejosez M, Krumenacker JS, Zitur LJ, Passeri M, Chu LF, Songyang Z, Thomson JA, Zwaka TP. Ronin is essential for embryogenesis and the pluripotency of mouse embryonic stem cells. Cell. 2008 Jun 27; 133(7):1162-74. PMID: 18585351.
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    88. Liang J, Wan M, Zhang Y, Gu P, Xin H, Jung SY, Qin J, Wong J, Cooney AJ, Liu D, Songyang Z. Nanog and Oct4 associate with unique transcriptional repression complexes in embryonic stem cells. Nat Cell Biol. 2008 Jun; 10(6):731-9. PMID: 18454139.
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    89. Rodriguez MC, Songyang Z. BRCT domains: phosphopeptide binding and signaling modules. Front Biosci. 2008 May 01; 13:5905-15. PMID: 18508631.
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    90. Liu D, Songyang Z. ERM-mediated genetic screens in mammalian cells. Methods Enzymol. 2008; 446:409-19. PMID: 18603136.
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    91. Bullock AN, Rodriguez MC, Debreczeni JE, Songyang Z, Knapp S. Structure of the SOCS4-ElonginB/C complex reveals a distinct SOCS box interface and the molecular basis for SOCS-dependent EGFR degradation. Structure. 2007 Nov; 15(11):1493-504. PMID: 17997974.
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    92. Huang H, Li L, Wu C, Schibli D, Colwill K, Ma S, Li C, Roy P, Ho K, Songyang Z, Pawson T, Gao Y, Li SS. Defining the specificity space of the human SRC homology 2 domain. Mol Cell Proteomics. 2008 Apr; 7(4):768-84. PMID: 17956856.
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    93. Yuan Y, Qin L, Liu D, Wu RC, Mussi P, Zhou S, Songyang Z, Xu J. Genetic screening reveals an essential role of p27kip1 in restriction of breast cancer progression. Cancer Res. 2007 Sep 01; 67(17):8032-42. PMID: 17804714.
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    94. Chen LY, Liu D, Songyang Z. Telomere maintenance through spatial control of telomeric proteins. Mol Cell Biol. 2007 Aug; 27(16):5898-909. PMID: 17562870.
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    95. Xin H, Liu D, Wan M, Safari A, Kim H, Sun W, O'Connor MS, Songyang Z. TPP1 is a homologue of ciliate TEBP-beta and interacts with POT1 to recruit telomerase. Nature. 2007 Feb 01; 445(7127):559-62. PMID: 17237767.
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    96. Ding Z, Liang J, Lu Y, Yu Q, Songyang Z, Lin SY, Mills GB. A retrovirus-based protein complementation assay screen reveals functional AKT1-binding partners. Proc Natl Acad Sci U S A. 2006 Oct 10; 103(41):15014-9. PMID: 17018644.
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    97. O'Connor MS, Safari A, Xin H, Liu D, Songyang Z. A critical role for TPP1 and TIN2 interaction in high-order telomeric complex assembly. Proc Natl Acad Sci U S A. 2006 Aug 08; 103(32):11874-9. PMID: 16880378.
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    98. Songyang Z, Liu D. Inside the mammalian telomere interactome: regulation and regulatory activities of telomeres. Crit Rev Eukaryot Gene Expr. 2006; 16(2):103-18. PMID: 16749892.
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    99. Luo H, Chan DW, Yang T, Rodriguez M, Chen BP, Leng M, Mu JJ, Chen D, Songyang Z, Wang Y, Qin J. A new XRCC1-containing complex and its role in cellular survival of methyl methanesulfonate treatment. Mol Cell Biol. 2004 Oct; 24(19):8356-65. PMID: 15367657.
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    100. Liu D, O'Connor MS, Qin J, Songyang Z. Telosome, a mammalian telomere-associated complex formed by multiple telomeric proteins. J Biol Chem. 2004 Dec 03; 279(49):51338-42. PMID: 15383534.
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    101. Liu D, Safari A, O'Connor MS, Chan DW, Laegeler A, Qin J, Songyang Z. PTOP interacts with POT1 and regulates its localization to telomeres. Nat Cell Biol. 2004 Jul; 6(7):673-80. PMID: 15181449.
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    102. Xing Y, Liu D, Zhang R, Joachimiak A, Songyang Z, Xu W. Structural basis of membrane targeting by the Phox homology domain of cytokine-independent survival kinase (CISK-PX). J Biol Chem. 2004 Jul 16; 279(29):30662-9. PMID: 15126499.
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    103. O'Connor MS, Safari A, Liu D, Qin J, Songyang Z. The human Rap1 protein complex and modulation of telomere length. J Biol Chem. 2004 Jul 02; 279(27):28585-91. PMID: 15100233.
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    104. Songyang Z, Cantley LC. ZIP codes for delivering SH2 domains. Cell. 2004 Jan 23; 116(2 Suppl):S41-3, 2 p following S48. PMID: 15055580.
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    105. Rodriguez M, Li SS, Harper JW, Songyang Z. An oriented peptide array library (OPAL) strategy to study protein-protein interactions. J Biol Chem. 2004 Mar 05; 279(10):8802-7. PMID: 14679191.
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    106. Rodriguez M, Yu X, Chen J, Songyang Z. Phosphopeptide binding specificities of BRCA1 COOH-terminal (BRCT) domains. J Biol Chem. 2003 Dec 26; 278(52):52914-8. PMID: 14578343.
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    107. Nakamura T, Sano M, Songyang Z, Schneider MD. A Wnt- and beta -catenin-dependent pathway for mammalian cardiac myogenesis. Proc Natl Acad Sci U S A. 2003 May 13; 100(10):5834-9. PMID: 12719544.
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    108. Guo X, Stafford LJ, Bryan B, Xia C, Ma W, Wu X, Liu D, Songyang Z, Liu M. A Rac/Cdc42-specific exchange factor, GEFT, induces cell proliferation, transformation, and migration. J Biol Chem. 2003 Apr 11; 278(15):13207-15. PMID: 12547822.
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    109. Xu J, Liu D, Songyang Z. The role of Asp-462 in regulating Akt activity. J Biol Chem. 2002 Sep 20; 277(38):35561-6. PMID: 12124386.
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    110. Zhong Q, Lazar CS, Tronchère H, Sato T, Meerloo T, Yeo M, Songyang Z, Emr SD, Gill GN. Endosomal localization and function of sorting nexin 1. Proc Natl Acad Sci U S A. 2002 May 14; 99(10):6767-72. PMID: 11997453.
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    111. Xu J, Liu D, Gill G, Songyang Z. Regulation of cytokine-independent survival kinase (CISK) by the Phox homology domain and phosphoinositides. J Cell Biol. 2001 Aug 20; 154(4):699-705. PMID: 11514587.
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    112. Liu D, Yang X, Songyang Z. Genetic Mapping of Cell Survival Pathways using Enhanced Retroviral Mutagens. ScientificWorldJournal. 2001; 1:95. PMID: 30147571.
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    113. Songyang Z. Analysis of protein kinase specificity by peptide libraries and prediction of in vivo substrates. Methods Enzymol. 2001; 332:171-83. PMID: 11305094.
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    114. Songyang Z, Liu D. Peptide library screening for determination of SH2 or phosphotyrosine-binding domain sequences. Methods Enzymol. 2001; 332:183-95. PMID: 11305095.
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    115. Liu D, Yang X, Yang D, Songyang Z. Genetic screens in mammalian cells by enhanced retroviral mutagens. Oncogene. 2000 Dec 07; 19(52):5964-72. PMID: 11146547.
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    116. Songyang Z, Yamanashi Y, Liu D, Baltimore D. Domain-dependent function of the rasGAP-binding protein p62Dok in cell signaling. J Biol Chem. 2001 Jan 26; 276(4):2459-65. PMID: 11042170.
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    117. Liu D, Yang X, Songyang Z. Identification of CISK, a new member of the SGK kinase family that promotes IL-3-dependent survival. Curr Biol. 2000 Oct 05; 10(19):1233-6. PMID: 11050396.
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    118. Nishikawa K, Sawasdikosol S, Fruman DA, Lai J, Songyang Z, Burakoff SJ, Yaffe MB, Cantley LC. A peptide library approach identifies a specific inhibitor for the ZAP-70 protein tyrosine kinase. Mol Cell. 2000 Oct; 6(4):969-74. PMID: 11090635.
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    119. Kisselev AF, Songyang Z, Goldberg AL. Why does threonine, and not serine, function as the active site nucleophile in proteasomes? J Biol Chem. 2000 May 19; 275(20):14831-7. PMID: 10809725.
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    120. Lin D, Gish GD, Songyang Z, Pawson T. The carboxyl terminus of B class ephrins constitutes a PDZ domain binding motif. J Biol Chem. 1999 Feb 05; 274(6):3726-33. PMID: 9920925.
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    121. Wang HY, Lin W, Dyck JA, Yeakley JM, Songyang Z, Cantley LC, Fu XD. SRPK2: a differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing factors in mammalian cells. J Cell Biol. 1998 Feb 23; 140(4):737-50. PMID: 9472028.
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    122. Welsh M, Songyang Z, Frantz JD, Trüb T, Reedquist KA, Karlsson T, Miyazaki M, Cantley LC, Band H, Shoelson SE. Stimulation through the T cell receptor leads to interactions between SHB and several signaling proteins. Oncogene. 1998 Feb 19; 16(7):891-901. PMID: 9484780.
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    123. Sondhi D, Xu W, Songyang Z, Eck MJ, Cole PA. Peptide and protein phosphorylation by protein tyrosine kinase Csk: insights into specificity and mechanism. Biochemistry. 1998 Jan 06; 37(1):165-72. PMID: 9425036.
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    124. Songyang Z, Cantley LC. The use of peptide library for the determination of kinase peptide substrates. Methods Mol Biol. 1998; 87:87-98. PMID: 9523263.
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    125. Lupher ML, Songyang Z, Shoelson SE, Cantley LC, Band H. The Cbl phosphotyrosine-binding domain selects a D(N/D)XpY motif and binds to the Tyr292 negative regulatory phosphorylation site of ZAP-70. J Biol Chem. 1997 Dec 26; 272(52):33140-4. PMID: 9407100.
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    126. Songyang Z, Baltimore D, Cantley LC, Kaplan DR, Franke TF. Interleukin 3-dependent survival by the Akt protein kinase. Proc Natl Acad Sci U S A. 1997 Oct 14; 94(21):11345-50. PMID: 9326612.
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    127. Li SC, Songyang Z, Vincent SJ, Zwahlen C, Wiley S, Cantley L, Kay LE, Forman-Kay J, Pawson T. High-affinity binding of the Drosophila Numb phosphotyrosine-binding domain to peptides containing a Gly-Pro-(p)Tyr motif. Proc Natl Acad Sci U S A. 1997 Jul 08; 94(14):7204-9. PMID: 9207069.
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    128. Holland SJ, Gale NW, Gish GD, Roth RA, Songyang Z, Cantley LC, Henkemeyer M, Yancopoulos GD, Pawson T. Juxtamembrane tyrosine residues couple the Eph family receptor EphB2/Nuk to specific SH2 domain proteins in neuronal cells. EMBO J. 1997 Jul 01; 16(13):3877-88. PMID: 9233798.
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    129. Ruzzene M, Songyang Z, Marin O, Donella-Deana A, Brunati AM, Guerra B, Agostinis P, Cantley LC, Pinna LA. Sequence specificity of C-terminal Src kinase (CSK)--a comparison with Src-related kinases c-Fgr and Lyn. Eur J Biochem. 1997 Jun 01; 246(2):433-9. PMID: 9208935.
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    130. Grabs D, Slepnev VI, Songyang Z, David C, Lynch M, Cantley LC, De Camilli P. The SH3 domain of amphiphysin binds the proline-rich domain of dynamin at a single site that defines a new SH3 binding consensus sequence. J Biol Chem. 1997 May 16; 272(20):13419-25. PMID: 9148966.
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    131. Nishikawa K, Toker A, Johannes FJ, Songyang Z, Cantley LC. Determination of the specific substrate sequence motifs of protein kinase C isozymes. J Biol Chem. 1997 Jan 10; 272(2):952-60. PMID: 8995387.
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    132. Songyang Z, Fanning AS, Fu C, Xu J, Marfatia SM, Chishti AH, Crompton A, Chan AC, Anderson JM, Cantley LC. Recognition of unique carboxyl-terminal motifs by distinct PDZ domains. Science. 1997 Jan 03; 275(5296):73-7. PMID: 8974395.
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    133. Songyang Z, Lu KP, Kwon YT, Tsai LH, Filhol O, Cochet C, Brickey DA, Soderling TR, Bartleson C, Graves DJ, DeMaggio AJ, Hoekstra MF, Blenis J, Hunter T, Cantley LC. A structural basis for substrate specificities of protein Ser/Thr kinases: primary sequence preference of casein kinases I and II, NIMA, phosphorylase kinase, calmodulin-dependent kinase II, CDK5, and Erk1. Mol Cell Biol. 1996 Nov; 16(11):6486-93. PMID: 8887677.
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    134. Boll W, Ohno H, Songyang Z, Rapoport I, Cantley LC, Bonifacino JS, Kirchhausen T. Sequence requirements for the recognition of tyrosine-based endocytic signals by clathrin AP-2 complexes. EMBO J. 1996 Nov 01; 15(21):5789-95. PMID: 8918456.
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    135. Couture C, Songyang Z, Jascur T, Williams S, Tailor P, Cantley LC, Mustelin T. Regulation of the Lck SH2 domain by tyrosine phosphorylation. J Biol Chem. 1996 Oct 04; 271(40):24880-4. PMID: 8798764.
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    136. Auger KR, Songyang Z, Lo SH, Roberts TM, Chen LB. Platelet-derived growth factor-induced formation of tensin and phosphoinositide 3-kinase complexes. J Biol Chem. 1996 Sep 20; 271(38):23452-7. PMID: 8798552.
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    137. O'Bryan JP, Martin CB, Songyang Z, Cantley LC, Der CJ. Binding specificity and mutational analysis of the phosphotyrosine binding domain of the brain-specific adaptor protein ShcC. J Biol Chem. 1996 May 17; 271(20):11787-91. PMID: 8662772.
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    138. O'Bryan JP, Songyang Z, Cantley L, Der CJ, Pawson T. A mammalian adaptor protein with conserved Src homology 2 and phosphotyrosine-binding domains is related to Shc and is specifically expressed in the brain. Proc Natl Acad Sci U S A. 1996 Apr 02; 93(7):2729-34. PMID: 8610109.
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    139. Derman MP, Chen JY, Spokes KC, Songyang Z, Cantley LG. An 11-amino acid sequence from c-met initiates epithelial chemotaxis via phosphatidylinositol 3-kinase and phospholipase C. J Biol Chem. 1996 Feb 23; 271(8):4251-5. PMID: 8626770.
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    140. Songyang Z, Gish G, Mbamalu G, Pawson T, Cantley LC. A single point mutation switches the specificity of group III Src homology (SH) 2 domains to that of group I SH2 domains. J Biol Chem. 1995 Nov 03; 270(44):26029-32. PMID: 7592796.
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    141. Songyang Z, Margolis B, Chaudhuri M, Shoelson SE, Cantley LC. The phosphotyrosine interaction domain of SHC recognizes tyrosine-phosphorylated NPXY motif. J Biol Chem. 1995 Jun 23; 270(25):14863-6. PMID: 7541030.
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    142. Karlsson T, Songyang Z, Landgren E, Lavergne C, Di Fiore PP, Anafi M, Pawson T, Cantley LC, Claesson-Welsh L, Welsh M. Molecular interactions of the Src homology 2 domain protein Shb with phosphotyrosine residues, tyrosine kinase receptors and Src homology 3 domain proteins. Oncogene. 1995 Apr 20; 10(8):1475-83. PMID: 7537362.
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    143. Songyang Z, Blechner S, Hoagland N, Hoekstra MF, Piwnica-Worms H, Cantley LC. Use of an oriented peptide library to determine the optimal substrates of protein kinases. Curr Biol. 1994 Nov 01; 4(11):973-82. PMID: 7874496.
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    144. Marengere LE, Songyang Z, Gish GD, Schaller MD, Parsons JT, Stern MJ, Cantley LC, Pawson T. SH2 domain specificity and activity modified by a single residue. Nature. 1994 Jun 09; 369(6480):502-5. PMID: 7515480.
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    145. Songyang Z, Shoelson SE, McGlade J, Olivier P, Pawson T, Bustelo XR, Barbacid M, Sabe H, Hanafusa H, Yi T, et al. Specific motifs recognized by the SH2 domains of Csk, 3BP2, fps/fes, GRB-2, HCP, SHC, Syk, and Vav. Mol Cell Biol. 1994 Apr; 14(4):2777-85. PMID: 7511210.
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    146. Liu X, Brodeur SR, Gish G, Songyang Z, Cantley LC, Laudano AP, Pawson T. Regulation of c-Src tyrosine kinase activity by the Src SH2 domain. Oncogene. 1993 May; 8(5):1119-26. PMID: 7683128.
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    147. Songyang Z, Shoelson SE, Chaudhuri M, Gish G, Pawson T, Haser WG, King F, Roberts T, Ratnofsky S, Lechleider RJ, et al. SH2 domains recognize specific phosphopeptide sequences. Cell. 1993 Mar 12; 72(5):767-78. PMID: 7680959.
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