ALEKSANDAR MILOSAVLJEVIC to Humans
This is a "connection" page, showing publications ALEKSANDAR MILOSAVLJEVIC has written about Humans.
Connection Strength
0.492
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Deconvolution of cancer cell states by the XDec-SM method. PLoS Comput Biol. 2023 08; 19(8):e1011365.
Score: 0.022
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Clinical diagnosis of metabolic disorders using untargeted metabolomic profiling and disease-specific networks learned from profiling data. Sci Rep. 2022 04 21; 12(1):6556.
Score: 0.020
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CTD: An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models. PLoS Comput Biol. 2021 01; 17(1):e1008550.
Score: 0.019
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Glioma-Derived miRNA-Containing Extracellular Vesicles Induce Angiogenesis by Reprogramming Brain Endothelial Cells. Cell Rep. 2020 02 18; 30(7):2065-2074.e4.
Score: 0.018
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exRNA Atlas Analysis Reveals Distinct Extracellular RNA Cargo Types and Their Carriers Present across Human Biofluids. Cell. 2019 04 04; 177(2):463-477.e15.
Score: 0.017
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Histoepigenetic analysis of HPV- and tobacco-associated head and neck cancer identifies both subtype-specific and common therapeutic targets despite divergent microenvironments. Oncogene. 2019 05; 38(19):3551-3568.
Score: 0.016
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Allele-specific epigenome maps reveal sequence-dependent stochastic switching at regulatory loci. Science. 2018 09 28; 361(6409).
Score: 0.016
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Melatonin levels in human diabetic dental pulp tissue and its effects on dental pulp cells under hyperglycaemic conditions. Int Endod J. 2018 Oct; 51(10):1149-1158.
Score: 0.015
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Epigenomic Deconvolution of Breast Tumors Reveals Metabolic Coupling between Constituent Cell Types. Cell Rep. 2016 11 15; 17(8):2075-2086.
Score: 0.014
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Epigenomic footprints across 111 reference epigenomes reveal tissue-specific epigenetic regulation of lincRNAs. Nat Commun. 2015 Feb 18; 6:6370.
Score: 0.012
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Analysis of interactions between the epigenome and structural mutability of the genome using Genboree Workbench tools. BMC Bioinformatics. 2014; 15 Suppl 7:S2.
Score: 0.012
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Identification of cancer fusion drivers using network fusion centrality. Bioinformatics. 2013 May 01; 29(9):1174-81.
Score: 0.011
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Confounding by repetitive elements and CpG islands does not explain the association between hypomethylation and genomic instability. PLoS Genet. 2013; 9(2):e1003333.
Score: 0.011
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The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial sequences. BMC Bioinformatics. 2012; 13 Suppl 13:S11.
Score: 0.010
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Genomic hypomethylation in the human germline associates with selective structural mutability in the human genome. PLoS Genet. 2012; 8(5):e1002692.
Score: 0.010
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Long-range massively parallel mate pair sequencing detects distinct mutations and similar patterns of structural mutability in two breast cancer cell lines. Cancer Genet. 2011 Aug; 204(8):447-57.
Score: 0.010
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Emerging patterns of epigenomic variation. Trends Genet. 2011 Jun; 27(6):242-50.
Score: 0.010
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Discovering functional modules by identifying recurrent and mutually exclusive mutational patterns in tumors. BMC Med Genomics. 2011 Apr 14; 4:34.
Score: 0.010
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Putting epigenome comparison into practice. Nat Biotechnol. 2010 Oct; 28(10):1053-6.
Score: 0.009
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A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome. Genome Res. 2009 Feb; 19(2):167-77.
Score: 0.008
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Pash 2.0: scaleable sequence anchoring for next-generation sequencing technologies. Pac Symp Biocomput. 2008; 102-13.
Score: 0.008
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Human-specific changes of genome structure detected by genomic triangulation. Science. 2007 Apr 13; 316(5822):235-7.
Score: 0.007
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Supracerebellar highway-fast and safe road to pediatric pineal tumor resection. Childs Nerv Syst. 2025 Aug 13; 41(1):260.
Score: 0.006
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Limiting endosomal damage sensing reduces inflammation triggered by lipid nanoparticle endosomal escape. Nat Nanotechnol. 2025 Sep; 20(9):1285-1297.
Score: 0.006
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Mapping MAVE data for use in human genomics applications. Genome Biol. 2025 Jun 25; 26(1):179.
Score: 0.006
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Playbook workflow builder: Interactive construction of bioinformatics workflows. PLoS Comput Biol. 2025 Apr; 21(4):e1012901.
Score: 0.006
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Pooled genomic indexing of rhesus macaque. Genome Res. 2005 Feb; 15(2):292-301.
Score: 0.006
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Generating Clinical-Grade Gene-Disease Validity Classifications Through the ClinGen Data Platforms. Annu Rev Biomed Data Sci. 2024 08; 7(1):31-50.
Score: 0.006
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Pash: efficient genome-scale sequence anchoring by Positional Hashing. Genome Res. 2004 Apr; 14(4):672-8.
Score: 0.006
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Clipless skeletonized internal mammary artery harvesting with harmonic technology. Multimed Man Cardiothorac Surg. 2023 May 22; 2023.
Score: 0.006
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Exosomes, microvesicles, and other extracellular vesicles-a Keystone Symposia report. Ann N Y Acad Sci. 2023 05; 1523(1):24-37.
Score: 0.005
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CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase. Nucleic Acids Res. 2023 01 06; 51(D1):D1230-D1241.
Score: 0.005
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A community approach to the cancer-variant-interpretation bottleneck. Nat Cancer. 2022 05; 3(5):522-525.
Score: 0.005
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Epigenetic and senescence markers indicate an accelerated ageing-like state in women with preeclamptic pregnancies. EBioMedicine. 2021 Aug; 70:103536.
Score: 0.005
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Effective Aspirin Treatment of Women at Risk for Preeclampsia Delays the Metabolic Clock of Gestation. Hypertension. 2021 11; 78(5):1398-1410.
Score: 0.005
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The economic value of bioinformation. Bioinformatics. 2000 Jul; 16(7):571-2.
Score: 0.005
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Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software. BMC Bioinformatics. 2020 Jan 13; 21(1):16.
Score: 0.004
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The Extracellular RNA Communication Consortium: Establishing Foundational Knowledge and Technologies for Extracellular RNA Research. Cell. 2019 04 04; 177(2):231-242.
Score: 0.004
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exceRpt: A Comprehensive Analytic Platform for Extracellular RNA Profiling. Cell Syst. 2019 04 24; 8(4):352-357.e3.
Score: 0.004
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Untargeted metabolomic profiling reveals multiple pathway perturbations and new clinical biomarkers in urea cycle disorders. Genet Med. 2019 09; 21(9):1977-1986.
Score: 0.004
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ClinGen Allele Registry links information about genetic variants. Hum Mutat. 2018 11; 39(11):1690-1701.
Score: 0.004
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ClinGen advancing genomic data-sharing standards as a GA4GH driver project. Hum Mutat. 2018 11; 39(11):1686-1689.
Score: 0.004
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Evidence-based assessments of clinical actionability in the context of secondary findings: Updates from ClinGen's Actionability Working Group. Hum Mutat. 2018 11; 39(11):1677-1685.
Score: 0.004
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ClinGen Pathogenicity Calculator: a configurable system for assessing pathogenicity of genetic variants. Genome Med. 2017 01 12; 9(1):3.
Score: 0.004
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Performance of ACMG-AMP Variant-Interpretation Guidelines among Nine Laboratories in the Clinical Sequencing Exploratory Research Consortium. Am J Hum Genet. 2016 06 02; 98(6):1067-1076.
Score: 0.003
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Extending gene ontology in the context of extracellular RNA and vesicle communication. J Biomed Semantics. 2016; 7:19.
Score: 0.003
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Discovering distinct genes represented in 29,570 clones from infant brain cDNA libraries by applying sequencing by hybridization methodology. Genome Res. 1996 Feb; 6(2):132-41.
Score: 0.003
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Providing Access to Genomic Variant Knowledge in a Healthcare Setting: A Vision for the ClinGen Electronic Health Records Workgroup. Clin Pharmacol Ther. 2016 Feb; 99(2):157-60.
Score: 0.003
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Recurrent BCAM-AKT2 fusion gene leads to a constitutively activated AKT2 fusion kinase in high-grade serous ovarian carcinoma. Proc Natl Acad Sci U S A. 2015 Mar 17; 112(11):E1272-7.
Score: 0.003
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Integrative analysis of 111 reference human epigenomes. Nature. 2015 Feb 19; 518(7539):317-30.
Score: 0.003
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Intermediate DNA methylation is a conserved signature of genome regulation. Nat Commun. 2015 Feb 18; 6:6363.
Score: 0.003
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mtDNA haplogroup and single nucleotide polymorphisms structure human microbiome communities. BMC Genomics. 2014 Apr 03; 15:257.
Score: 0.003
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CDKN2D-WDFY2 is a cancer-specific fusion gene recurrent in high-grade serous ovarian carcinoma. PLoS Genet. 2014 Mar; 10(3):e1004216.
Score: 0.003
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Comparison and quantitative verification of mapping algorithms for whole-genome bisulfite sequencing. Nucleic Acids Res. 2014 Apr; 42(6):e43.
Score: 0.003
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Recommendations for the design and analysis of epigenome-wide association studies. Nat Methods. 2013 Oct; 10(10):949-55.
Score: 0.003
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Discovering simple DNA sequences by the algorithmic significance method. Comput Appl Biosci. 1993 Aug; 9(4):407-11.
Score: 0.003
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NAHR-mediated copy-number variants in a clinical population: mechanistic insights into both genomic disorders and Mendelizing traits. Genome Res. 2013 Sep; 23(9):1395-409.
Score: 0.003
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Discovering sequence similarity by the algorithmic significance method. Proc Int Conf Intell Syst Mol Biol. 1993; 1:284-91.
Score: 0.003
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Atlas2 Cloud: a framework for personal genome analysis in the cloud. BMC Genomics. 2012; 13 Suppl 6:S19.
Score: 0.003
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Prototypic sequences for human repetitive DNA. J Mol Evol. 1992 Oct; 35(4):286-91.
Score: 0.003
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Spark: a navigational paradigm for genomic data exploration. Genome Res. 2012 Nov; 22(11):2262-9.
Score: 0.003
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ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. Genome Res. 2012 Sep; 22(9):1813-31.
Score: 0.003
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Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood. Genome Biol. 2012 Jun 15; 13(6):R43.
Score: 0.003
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A metagenomic approach to characterization of the vaginal microbiome signature in pregnancy. PLoS One. 2012; 7(6):e36466.
Score: 0.003
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An integrative variant analysis suite for whole exome next-generation sequencing data. BMC Bioinformatics. 2012 Jan 12; 13:8.
Score: 0.003
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Use of array CGH to detect exonic copy number variants throughout the genome in autism families detects a novel deletion in TMLHE. Hum Mol Genet. 2011 Nov 15; 20(22):4360-70.
Score: 0.002
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Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome. Gastroenterology. 2011 Nov; 141(5):1782-91.
Score: 0.002
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A genome-wide search for promoters that respond to increased MYCN reveals both new oncogenic and tumor suppressor microRNAs associated with aggressive neuroblastoma. Cancer Res. 2011 Jun 01; 71(11):3841-51.
Score: 0.002
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The NIH Roadmap Epigenomics Mapping Consortium. Nat Biotechnol. 2010 Oct; 28(10):1045-8.
Score: 0.002
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Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications. Nat Biotechnol. 2010 Oct; 28(10):1097-105.
Score: 0.002
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Array comparative genomic hybridization detects chromosomal abnormalities in hematological cancers that are not detected by conventional cytogenetics. J Mol Diagn. 2010 Sep; 12(5):670-9.
Score: 0.002
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Proinflammatory role for let-7 microRNAS in experimental asthma. J Biol Chem. 2010 Sep 24; 285(39):30139-49.
Score: 0.002
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Evolutionary breakpoints in the gibbon suggest association between cytosine methylation and karyotype evolution. PLoS Genet. 2009 Jun; 5(6):e1000538.
Score: 0.002
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Somatic mutations affect key pathways in lung adenocarcinoma. Nature. 2008 Oct 23; 455(7216):1069-75.
Score: 0.002
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Polymorphic microsatellite loci for the common marmoset (Callithrix jacchus) designed using a cost- and time-efficient method. Am J Primatol. 2008 Sep; 70(9):906-10.
Score: 0.002
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Abundance and length of simple repeats in vertebrate genomes are determined by their structural properties. Genome Res. 2008 Oct; 18(10):1545-53.
Score: 0.002
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Evolutionary and biomedical insights from the rhesus macaque genome. Science. 2007 Apr 13; 316(5822):222-34.
Score: 0.002
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A high-resolution map of synteny disruptions in gibbon and human genomes. PLoS Genet. 2006 Dec 29; 2(12):e223.
Score: 0.002
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Designing new microsatellite markers for linkage and population genetic analyses in rhesus macaques and other nonhuman primates. Genomics. 2006 Dec; 88(6):706-710.
Score: 0.002
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The DNA sequence, annotation and analysis of human chromosome 3. Nature. 2006 Apr 27; 440(7088):1194-8.
Score: 0.002
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The finished DNA sequence of human chromosome 12. Nature. 2006 03 16; 440(7082):346-51.
Score: 0.002
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Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 2004 04 01; 428(6982):493-521.
Score: 0.001
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Identification and characterization of new human medium reiteration frequency repeats. Nucleic Acids Res. 1993 Mar 11; 21(5):1273-9.
Score: 0.001