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Thomas Bourquard

TitlePostdoc Fellows and Associates
InstitutionBaylor College of Medicine
DepartmentPostDoc
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Musnier A, Bourquard T, Vallet A, Mathias L, Bruneau G, Ayoub MA, Travert O, Corde Y, Gallay N, Boulo T, Cortes S, Watier H, Cr?pieux P, Reiter E, Poupon A. A New in Silico Antibody Similarity Measure Both Identifies Large Sets of Epitope Binders with Distinct CDRs and Accurately Predicts Off-Target Reactivity. Int J Mol Sci. 2022 Aug 28; 23(17). PMID: 36077163; PMCID: PMC9456297.
      Citations:    
    2. Lagisetty Y, Bourquard T, Al-Ramahi I, Mangleburg CG, Mota S, Soleimani S, Shulman JM, Botas J, Lee K, Lichtarge O. Identification of risk genes for Alzheimer's disease by gene embedding. Cell Genom. 2022 Sep 14; 2(9). PMID: 36268052; PMCID: PMC9581494.
      Citations:    
    3. Marciano DC, Wang C, Hsu TK, Bourquard T, Atri B, Nehring RB, Abel NS, Bowling EA, Chen TJ, Lurie PD, Katsonis P, Rosenberg SM, Herman C, Lichtarge O, Marciano DC, Wang C, Hsu TK, Bourquard T, Atri B, Nehring RB, Abel NS, Bowling EA, Chen TJ, Lurie PD, Katsonis P, Rosenberg SM, Herman C, Lichtarge O. Evolutionary action of mutations reveals antimicrobial resistance genes in Escherichia coli. Nat Commun. 2022 06 09; 13(1):3189. PMID: 35680894; PMCID: PMC9184624.
      Citations: 1     Fields:    Translation:Cells
    4. Wang C, Konecki DM, Marciano DC, Govindarajan H, Williams AM, Wastuwidyaningtyas B, Bourquard T, Katsonis P, Lichtarge O, Wang C, Konecki DM, Marciano DC, Govindarajan H, Williams AM, Wastuwidyaningtyas B, Bourquard T, Katsonis P, Lichtarge O. Identification of evolutionarily stable functional and immunogenic sites across the SARS-CoV-2 proteome and greater coronavirus family. Bioinformatics. 2021 May 27. PMID: 34043002; PMCID: PMC8243408.
      Citations: 3     Fields:    
    5. Wang C, Konecki DM, Marciano DC, Govindarajan H, Williams AM, Wastuwidyaningtyas B, Bourquard T, Katsonis P, Lichtarge O, Wang C, Konecki DM, Marciano DC, Govindarajan H, Williams AM, Wastuwidyaningtyas B, Bourquard T, Katsonis P, Lichtarge O, Wang C, Konecki DM, Marciano DC, Govindarajan H, Williams AM, Wastuwidyaningtyas B, Bourquard T, Katsonis P, Lichtarge O. Identification of evolutionarily stable functional and immunogenic sites across the SARS-CoV-2 proteome and the greater coronavirus family. Res Sq. 2021 Feb 15. PMID: 33106800; PMCID: PMC7587783.
      Citations:    
    6. Tahir S, Bourquard T, Musnier A, Jullian Y, Corde Y, Omahdi Z, Mathias L, Reiter E, Crépieux P, Bruneau G, Poupon A, Tahir S, Bourquard T, Musnier A, Jullian Y, Corde Y, Omahdi Z, Mathias L, Reiter E, Crépieux P, Bruneau G, Poupon A, Tahir S, Bourquard T, Musnier A, Mathias L, Reiter E, Cr?pieux P, Bruneau G, Poupon A. Accurate determination of epitope for antibodies with unknown 3D structures. MAbs. 2021 Jan-Dec; 13(1):1961349. PMID: 34432559; PMCID: PMC8405158.
      Citations: 1     Fields:    Translation:HumansCells
    7. Neiveyans M, Melhem R, Arnoult C, Bourquard T, Jarlier M, Busson M, Laroche A, Cerutti M, Pugnière M, Ternant D, Gaborit N, Chardès T, Poupon A, Gouilleux-Gruart V, Pèlegrin A, Poul MA, Neiveyans M, Melhem R, Arnoult C, Bourquard T, Jarlier M, Busson M, Laroche A, Cerutti M, Pugnière M, Ternant D, Gaborit N, Chardès T, Poupon A, Gouilleux-Gruart V, Pèlegrin A, Poul MA, Neiveyans M, Melhem R, Bourquard T, Jarlier M, Busson M, Laroche A, Cerutti M, Pugni?re M, Gaborit N, Chard?s T, Poupon A, Gouilleux-Gruart V, P?legrin A, Poul MA. A recycling anti-transferrin receptor-1 monoclonal antibody as an efficient therapy for erythroleukemia through target up-regulation and antibody-dependent cytotoxic effector functions. MAbs. 2019 04; 11(3):593-605. PMID: 30604643; PMCID: PMC6512944.
      Citations: 7     Fields:    Translation:HumansAnimalsCells
    8. Ashraf Y, Mansouri H, Laurent-Matha V, Alcaraz LB, Roger P, Guiu S, Derocq D, Robin G, Michaud HA, Delpech H, Jarlier M, Pugnière M, Robert B, Puel A, Martin L, Landomiel F, Bourquard T, Achour O, Fruitier-Arnaudin I, Pichard A, Deshayes E, Turtoi A, Poupon A, Simony-Lafontaine J, Boissière-Michot F, Pirot N, Bernex F, Jacot W, du Manoir S, Theillet C, Pouget JP, Navarro-Teulon I, Bonnefoy N, Pèlegrin A, Chardès T, Martineau P, Liaudet-Coopman E, Ashraf Y, Mansouri H, Laurent-Matha V, Alcaraz LB, Roger P, Guiu S, Derocq D, Robin G, Michaud HA, Delpech H, Jarlier M, Pugnière M, Robert B, Puel A, Martin L, Landomiel F, Bourquard T, Achour O, Fruitier-Arnaudin I, Pichard A, Deshayes E, Turtoi A, Poupon A, Simony-Lafontaine J, Boissière-Michot F, Pirot N, Bernex F, Jacot W, du Manoir S, Theillet C, Pouget JP, Navarro-Teulon I, Bonnefoy N, Pèlegrin A, Chardès T, Martineau P, Liaudet-Coopman E, Laurent-Matha V, Guiu S, Delpech H, Pugni?re M, Simony-Lafontaine J, Boissi?re-Michot F, Pirot N, Bernex F, P?legrin A, Chard?s T. Immunotherapy of triple-negative breast cancer with cathepsin D-targeting antibodies. J Immunother Cancer. 2019 02 04; 7(1):29. PMID: 30717773; PMCID: PMC6360707.
      Citations: 24     Fields:    Translation:HumansAnimalsCells
    9. Bourquard T, Musnier A, Tréfier A, Landomiel F, Boulo T, Reiter E, Crépieux P, Poupon A, Bourquard T, Musnier A, Tréfier A, Landomiel F, Boulo T, Reiter E, Crépieux P, Poupon A, Bourquard T, Musnier A, Tr?fier A, Landomiel F, Boulo T, Reiter E, Cr?pieux P, Poupon A. Methods to Determine Interaction Interfaces Between ?-Arrestins and Their Protein Partners. Methods Mol Biol. 2019; 1957:177-194. PMID: 30919355.
      Citations:    Fields:    Translation:HumansCells
    10. Bourquard T, Musnier A, Puard V, Tahir S, Ayoub MA, Jullian Y, Boulo T, Gallay N, Watier H, Bruneau G, Reiter E, Crépieux P, Poupon A, Bourquard T, Musnier A, Puard V, Tahir S, Ayoub MA, Jullian Y, Boulo T, Gallay N, Watier H, Bruneau G, Reiter E, Crépieux P, Poupon A, Bourquard T, Musnier A, Puard V, Tahir S, Ayoub MA, Jullian Y, Boulo T, Gallay N, Watier H, Bruneau G, Reiter E, Cr?pieux P, Poupon A. MAbTope: A Method for Improved Epitope Mapping. J Immunol. 2018 11 15; 201(10):3096-3105. PMID: 30322966.
      Citations: 8     Fields:    Translation:HumansCells
    11. Tréfier A, Musnier A, Landomiel F, Bourquard T, Boulo T, Ayoub MA, León K, Bruneau G, Chevalier M, Durand G, Blache MC, Inoue A, Fontaine J, Gauthier C, Tesseraud S, Reiter E, Poupon A, Crépieux P, Tréfier A, Musnier A, Landomiel F, Bourquard T, Boulo T, Ayoub MA, León K, Bruneau G, Chevalier M, Durand G, Blache MC, Inoue A, Fontaine J, Gauthier C, Tesseraud S, Reiter E, Poupon A, Crépieux P, Tr?fier A, Musnier A, Landomiel F, Bourquard T, Boulo T, Ayoub MA, Le?n K, Bruneau G, Chevalier M, Durand G, Blache MC, Fontaine J, Gauthier C, Tesseraud S, Reiter E, Poupon A, Cr?pieux P. G protein-dependent signaling triggers a ?-arrestin-scaffolded p70S6K/ rpS6 module that controls 5'TOP mRNA translation. FASEB J. 2018 03; 32(3):1154-1169. PMID: 29084767.
      Citations: 9     Fields:    Translation:AnimalsCells
    12. Dambroise E, Simion M, Bourquard T, Bouffard S, Rizzi B, Jaszczyszyn Y, Bourge M, Affaticati P, Heuzé A, Jouralet J, Edouard J, Brown S, Thermes C, Poupon A, Reiter E, Sohm F, Bourrat F, Joly JS, Dambroise E, Simion M, Bourquard T, Bouffard S, Rizzi B, Jaszczyszyn Y, Bourge M, Affaticati P, Heuzé A, Jouralet J, Edouard J, Brown S, Thermes C, Poupon A, Reiter E, Sohm F, Bourrat F, Joly JS, Bouffard S, Jaszczyszyn Y, Bourge M, Heuz? A, Edouard J, Brown S, Thermes C, Sohm F, Joly JS. Postembryonic Fish Brain Proliferation Zones Exhibit Neuroepithelial-Type Gene Expression Profile. Stem Cells. 2017 06; 35(6):1505-1518. PMID: 28181357.
      Citations: 10     Fields:    Translation:AnimalsCells
    13. Crépieux P, Poupon A, Langonné-Gallay N, Reiter E, Delgado J, Schaefer MH, Bourquard T, Serrano L, Kiel C, Crépieux P, Poupon A, Langonné-Gallay N, Reiter E, Delgado J, Schaefer MH, Bourquard T, Serrano L, Kiel C, Cr?pieux P, Poupon A, Langonn?-Gallay N, Reiter E, Bourquard T, Serrano L. A Comprehensive View of the ?-Arrestinome. Front Endocrinol (Lausanne). 2017; 8:32. PMID: 28321204; PMCID: PMC5337525.
      Citations: 9     Fields:    
    14. Cassier E, Gallay N, Bourquard T, Claeysen S, Bockaert J, Crépieux P, Poupon A, Reiter E, Marin P, Vandermoere F, Cassier E, Gallay N, Bourquard T, Claeysen S, Bockaert J, Crépieux P, Poupon A, Reiter E, Marin P, Vandermoere F, Cassier E, Gallay N, Bourquard T, Claeysen S, Bockaert J, Cr?pieux P, Poupon A, Reiter E, Marin P, Vandermoere F. Phosphorylation of ?-arrestin2 at Thr383 by MEK underlies ?-arrestin-dependent activation of Erk1/2 by GPCRs. Elife. 2017 02 07; 6. PMID: 28169830; PMCID: PMC5325621.
      Citations: 18     Fields:    Translation:HumansCells
    15. Brachet G, Bourquard T, Gallay N, Reiter E, Gouilleux-Gruart V, Poupon A, Watier H, Brachet G, Bourquard T, Gallay N, Reiter E, Gouilleux-Gruart V, Poupon A, Watier H, Brachet G, Bourquard T, Gallay N, Reiter E, Gouilleux-Gruart V, Poupon A, Watier H. Eculizumab epitope on complement C5: Progress towards a better understanding of the mechanism of action. Mol Immunol. 2016 09; 77:126-31. PMID: 27497837.
      Citations: 10     Fields:    Translation:HumansAnimals
    16. Bourquard T, Landomiel F, Reiter E, Crépieux P, Ritchie DW, Azé J, Poupon A, Bourquard T, Landomiel F, Reiter E, Crépieux P, Ritchie DW, Azé J, Poupon A, Bourquard T, Landomiel F, Reiter E, Cr?pieux P, Ritchie DW, Az? J, Poupon A. Unraveling the molecular architecture of a G protein-coupled receptor/?-arrestin/Erk module complex. Sci Rep. 2015 Jun 01; 5:10760. PMID: 26030356; PMCID: PMC4649906.
      Citations: 23     Fields:    Translation:HumansCells
    17. Monestier O, Servin B, Auclair S, Bourquard T, Poupon A, Pascal G, Fabre S, Monestier O, Servin B, Auclair S, Bourquard T, Poupon A, Pascal G, Fabre S, Monestier O, Servin B, Auclair S, Bourquard T, Poupon A, Pascal G, Fabre S. Evolutionary origin of bone morphogenetic protein 15 and growth and differentiation factor 9 and differential selective pressure between mono- and polyovulating species. Biol Reprod. 2014 Oct; 91(4):83. PMID: 25100713.
      Citations: 7     Fields:    Translation:AnimalsCells
    18. Landomiel F, Gallay N, Jégot G, Tranchant T, Durand G, Bourquard T, Crépieux P, Poupon A, Reiter E, Landomiel F, Gallay N, Jégot G, Tranchant T, Durand G, Bourquard T, Crépieux P, Poupon A, Reiter E, Landomiel F, Gallay N, J?got G, Tranchant T, Durand G, Bourquard T, Cr?pieux P, Poupon A, Reiter E. Biased signalling in follicle stimulating hormone action. Mol Cell Endocrinol. 2014 Jan 25; 382(1):452-459. PMID: 24121199.
      Citations: 21     Fields:    Translation:HumansAnimalsCells
    19. Fleishman SJ, Whitehead TA, Strauch EM, Corn JE, Qin S, Zhou HX, Mitchell JC, Demerdash ON, Takeda-Shitaka M, Terashi G, Moal IH, Li X, Bates PA, Zacharias M, Park H, Ko JS, Lee H, Seok C, Bourquard T, Bernauer J, Poupon A, Azé J, Soner S, Ovali SK, Ozbek P, Tal NB, Haliloglu T, Hwang H, Vreven T, Pierce BG, Weng Z, Pérez-Cano L, Pons C, Fernández-Recio J, Jiang F, Yang F, Gong X, Cao L, Xu X, Liu B, Wang P, Li C, Wang C, Robert CH, Guharoy M, Liu S, Huang Y, Li L, Guo D, Chen Y, Xiao Y, London N, Itzhaki Z, Schueler-Furman O, Inbar Y, Potapov V, Cohen M, Schreiber G, Tsuchiya Y, Kanamori E, Standley DM, Nakamura H, Kinoshita K, Driggers CM, Hall RG, Morgan JL, Hsu VL, Zhan J, Yang Y, Zhou Y, Kastritis PL, Bonvin AM, Zhang W, Camacho CJ, Kilambi KP, Sircar A, Gray JJ, Ohue M, Uchikoga N, Matsuzaki Y, Ishida T, Akiyama Y, Khashan R, Bush S, Fouches D, Tropsha A, Esquivel-Rodríguez J, Kihara D, Stranges PB, Jacak R, Kuhlman B, Huang SY, Zou X, Wodak SJ, Janin J, Baker D, Fleishman SJ, Whitehead TA, Strauch EM, Corn JE, Qin S, Zhou HX, Mitchell JC, Demerdash ON, Takeda-Shitaka M, Terashi G, Moal IH, Li X, Bates PA, Zacharias M, Park H, Ko JS, Lee H, Seok C, Bourquard T, Bernauer J, Poupon A, Azé J, Soner S, Ovali SK, Ozbek P, Tal NB, Haliloglu T, Hwang H, Vreven T, Pierce BG, Weng Z, Pérez-Cano L, Pons C, Fernández-Recio J, Jiang F, Yang F, Gong X, Cao L, Xu X, Liu B, Wang P, Li C, Wang C, Robert CH, Guharoy M, Liu S, Huang Y, Li L, Guo D, Chen Y, Xiao Y, London N, Itzhaki Z, Schueler-Furman O, Inbar Y, Potapov V, Cohen M, Schreiber G, Tsuchiya Y, Kanamori E, Standley DM, Nakamura H, Kinoshita K, Driggers CM, Hall RG, Morgan JL, Hsu VL, Zhan J, Yang Y, Zhou Y, Kastritis PL, Bonvin AM, Zhang W, Camacho CJ, Kilambi KP, Sircar A, Gray JJ, Ohue M, Uchikoga N, Matsuzaki Y, Ishida T, Akiyama Y, Khashan R, Bush S, Fouches D, Tropsha A, Esquivel-Rodríguez J, Kihara D, Stranges PB, Jacak R, Kuhlman B, Huang SY, Zou X, Wodak SJ, Janin J, Baker D, Az? J, Haliloglu T, P?rez-Cano L, Fern?ndez-Recio J, Esquivel-Rodr?guez J. Community-wide assessment of protein-interface modeling suggests improvements to design methodology. J Mol Biol. 2011 Nov 25; 414(2):289-302. PMID: 22001016; PMCID: PMC3839241.
      Citations: 63     Fields:    Translation:Cells
    20. Bourquard T, Bernauer J, Azé J, Poupon A, Bourquard T, Bernauer J, Azé J, Poupon A, Bourquard T, Az? J. A collaborative filtering approach for protein-protein docking scoring functions. PLoS One. 2011 Apr 22; 6(4):e18541. PMID: 21526112; PMCID: PMC3081294.
      Citations: 12     Fields:    Translation:Cells
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