TitleAssociate Professor
InstitutionMD Anderson
Address7007 Bertner Avenue
Houston TX 77054-3403
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Xu Q, Hua J, Braga-Neto U, Xiong Z, Suh E, Dougherty ER. Confidence intervals for the true classification error conditioned on the estimated error. Technol Cancer Res Treat. 2006 Dec; 5(6):579-89. PMID: 17121434.
      Citations: 9     Fields:    Translation:Humans
    2. Choudhary A, Brun M, Hua J, Lowey J, Suh E, Dougherty ER. Genetic test bed for feature selection. Bioinformatics. 2006 Apr 01; 22(7):837-42. PMID: 16428263.
      Citations: 9     Fields:    Translation:Humans
    3. Hua J, Balagurunathan Y, Chen Y, Lowey J, Bittner ML, Xiong Z, Suh E, Dougherty ER. Normalization benefits microarray-based classification. EURASIP J Bioinform Syst Biol. 2006; 43056. PMID: 18427588; PMCID: PMC3171318.
      Citations: 9     
    4. Hua J, Xiong Z, Lowey J, Suh E, Dougherty ER. Optimal number of features as a function of sample size for various classification rules. Bioinformatics. 2005 Apr 15; 21(8):1509-15. PMID: 15572470.
      Citations: 84     Fields:    
    5. Zhou X, Wang X, Dougherty ER, Russ D, Suh E. Gene clustering based on clusterwide mutual information. J Comput Biol. 2004; 11(1):147-61. PMID: 15072693.
      Citations: 14     Fields:    
    6. Mousses S, Caplen NJ, Cornelison R, Weaver D, Basik M, Hautaniemi S, Elkahloun AG, Lotufo RA, Choudary A, Dougherty ER, Suh E, Kallioniemi O. RNAi microarray analysis in cultured mammalian cells. Genome Res. 2003 Oct; 13(10):2341-7. PMID: 14525932; PMCID: PMC403721.
      Citations: 36     Fields:    Translation:HumansCells
    7. Morikawa J, Li H, Kim S, Nishi K, Ueno S, Suh E, Dougherty E, Shmulevich I, Shiku H, Zhang W, Kobayashi T. Identification of signature genes by microarray for acute myeloid leukemia without maturation and acute promyelocytic leukemia with t(15;17)(q22;q12)(PML/RARalpha). Int J Oncol. 2003 Sep; 23(3):617-25. PMID: 12888896.
      Citations: 10     Fields:    Translation:HumansCells
    8. Kobayashi T, Yamaguchi M, Kim S, Morikawa J, Ogawa S, Ueno S, Suh E, Dougherty E, Shmulevich I, Shiku H, Zhang W. Microarray reveals differences in both tumors and vascular specific gene expression in de novo CD5+ and CD5- diffuse large B-cell lymphomas. Cancer Res. 2003 Jan 01; 63(1):60-6. PMID: 12517778.
      Citations: 18     Fields:    Translation:Humans
    9. Parallel programming to identify cellular contexts.
    10. Parallel algorithms in molecular biology. 232-240.
    11. Model-based evaluation of clustering validation measures. Pattern Recognition. 40:807-824.
    12. Conditional confidence intervals for the true classification error. 97-98.
    13. Providing computational science and engineering expertise for a large biomedical research program. 1226.
    14. Role of high performance parallel computing in biological research. 1386-1387.
    15. A Web-based medical image archive system. 31-41.
    16. Feature selection algorithms to find strong genes. Pattern Recognition Letters. 26:1444-1453.
    17. Impact of error estimation on feature selection. Pattern Recognition. 38:2472-2482.
    18. Can Markov chain models mimic biological regulation?. Journal of Biological Systems. 10:337-357.
    19. Parallel computation and visualization tools for codetermination analysis of multivariate gene expression relations. 297-310.
    20. A parallel algorithm for extracting transcriptional regulatory network motifs. 193-200.
    21. Integrated approach for computational systems biology. 409-449.
    22. Effect of normalization on microarray-based classification. 7-8.
    23. Parallel computing methods for analyzing gene expression relationships. 213-221.
    24. How can massively parallel computers help in the prediction of protein structure?. 180-181.
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