TitleAssistant Professor
InstitutionMD Anderson
DepartmentBioinformatics & Computational Biology
Address7007 Bertner Avenue
Houston TX 77054-3403
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Joffe E, Pettigrew EJ, Herskovic JR, Bearden CF, Bernstam EV. Expert guided natural language processing using one-class classification. J Am Med Inform Assoc. 2015 Sep; 22(5):962-6. PMID: 26063744.
      Citations: 4     Fields:    Translation:Humans
    2. Joffe E, Byrne MJ, Reeder P, Herskovic JR, Johnson CW, McCoy AB, Bernstam EV. Optimized dual threshold entity resolution for electronic health record databases--training set size and active learning. AMIA Annu Symp Proc. 2013; 2013:721-30. PMID: 24551372.
      Citations: 4     Fields:    
    3. Plaisant C, Chao T, Wu J, Hettinger AZ, Herskovic JR, Johnson TR, Bernstam EV, Markowitz E, Powsner S, Shneiderman B. Twinlist: novel user interface designs for medication reconciliation. AMIA Annu Symp Proc. 2013; 2013:1150-9. PMID: 24551399.
      Citations: 8     Fields:    Translation:Humans
    4. Johnson TR, Markowitz E, Bernstam EV, Herskovic JR, Thimbleby H. SYFSA: a framework for systematic yet flexible systems analysis. J Biomed Inform. 2013 Aug; 46(4):665-75. PMID: 23727053.
      Citations:    Fields:    
    5. Joffe E, Byrne MJ, Reeder P, Herskovic JR, Johnson CW, McCoy AB, Sittig DF, Bernstam EV. A benchmark comparison of deterministic and probabilistic methods for defining manual review datasets in duplicate records reconciliation. J Am Med Inform Assoc. 2014 Jan-Feb; 21(1):97-104. PMID: 23703827.
      Citations: 10     Fields:    Translation:Humans
    6. Wahle M, Widdows D, Herskovic JR, Bernstam EV, Cohen T. Deterministic binary vectors for efficient automated indexing of MEDLINE/PubMed abstracts. AMIA Annu Symp Proc. 2012; 2012:940-9. PMID: 23304369.
      Citations: 9     Fields:    
    7. Herskovic JR, Subramanian D, Cohen T, Bozzo-Silva PA, Bearden CF, Bernstam EV. Graph-based signal integration for high-throughput phenotyping. BMC Bioinformatics. 2012; 13 Suppl 13:S2. PMID: 23320851.
      Citations: 2     Fields:    Translation:Humans
    8. Joffe E, Havakuk O, Herskovic JR, Patel VL, Bernstam EV. Collaborative knowledge acquisition for the design of context-aware alert systems. J Am Med Inform Assoc. 2012 Nov-Dec; 19(6):988-94. PMID: 22744961.
      Citations: 2     Fields:    Translation:Humans
    9. Capurro D, Soto M, Vivent M, Lopetegui M, Herskovic JR. [Biomedical informatics]. Rev Med Chil. 2011 Dec; 139(12):1611-6. PMID: 22446710.
      Citations:    Fields:    Translation:Humans
    10. Silva PA, Bernstam EV, Markowitz E, Johnson TR, Zhang J, Herskovic JR. Automated medication reconciliation and complexity of care transitions. AMIA Annu Symp Proc. 2011; 2011:1252-60. PMID: 22195186.
      Citations: 5     Fields:    Translation:Humans
    11. Markowitz E, Bernstam EV, Herskovic J, Zhang J, Shneiderman B, Plaisant C, Johnson TR. Medication Reconciliation: Work Domain Ontology, prototype development, and a predictive model. AMIA Annu Symp Proc. 2011; 2011:878-87. PMID: 22195146.
      Citations: 3     Fields:    Translation:Humans
    12. Myers RB, Herskovic JR. Probabilistic techniques for obtaining accurate patient counts in Clinical Data Warehouses. J Biomed Inform. 2011 Dec; 44 Suppl 1:S69-S77. PMID: 21986292.
      Citations: 3     Fields:    Translation:Humans
    13. Goodwin JC, Johnson TR, Cohen T, Herskovic JR, Bernstam EV. Predicting biomedical document access as a function of past use. J Am Med Inform Assoc. 2012 May-Jun; 19(3):473-8. PMID: 21917645.
      Citations: 1     Fields:    Translation:Humans
    14. Herskovic JR, Cohen T, Subramanian D, Iyengar MS, Smith JW, Bernstam EV. MEDRank: using graph-based concept ranking to index biomedical texts. Int J Med Inform. 2011 Jun; 80(6):431-41. PMID: 21439897.
      Citations: 8     Fields:    Translation:Humans
    15. Herskovic JR, Goodwin JC, Bozzo Silva PA, Willcockson I, Franklin A. Sequential incoherence in a multi-party synchronous computer mediated communication for an introductory Health Informatics course. AMIA Annu Symp Proc. 2010 Nov 13; 2010:296-300. PMID: 21346988.
      Citations:    Fields:    Translation:Humans
    16. Tanaka LY, Herskovic JR, Iyengar MS, Bernstam EV. Sequential result refinement for searching the biomedical literature. J Biomed Inform. 2009 Aug; 42(4):678-84. PMID: 19272463.
      Citations: 2     Fields:    
    17. Herskovic JR, Tanaka LY, Hersh W, Bernstam EV. A day in the life of PubMed: analysis of a typical day's query log. J Am Med Inform Assoc. 2007 Mar-Apr; 14(2):212-20. PMID: 17213501.
      Citations: 36     Fields:    
    18. Herskovic JR, Iyengar MS, Bernstam EV. Using hit curves to compare search algorithm performance. J Biomed Inform. 2007 Apr; 40(2):93-9. PMID: 16469545.
      Citations: 1     Fields:    
    19. Bernstam EV, Herskovic JR, Aphinyanaphongs Y, Aliferis CF, Sriram MG, Hersh WR. Using citation data to improve retrieval from MEDLINE. J Am Med Inform Assoc. 2006 Jan-Feb; 13(1):96-105. PMID: 16221938.
      Citations: 19     Fields:    
    20. Herskovic JR, Bernstam EV. Using incomplete citation data for MEDLINE results ranking. AMIA Annu Symp Proc. 2005; 316-20. PMID: 16779053.
      Citations: 2     Fields:    
    21. Ownership of computers and abilities for their use in a sample of Chilean medical students. Medical Teacher. 22:197-199.
    22. Query log analysis in biomedicine. 359-377.
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