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JOHN N WEINSTEIN

TitleProfessor
InstitutionMD Anderson
DepartmentBioinformatics & Computational Biology
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Guo CC, Bondaruk J, Yao H, Wang Z, Zhang L, Lee S, Lee JG, Cogdell D, Zhang M, Yang G, Dadhania V, Choi W, Wei P, Gao J, Theodorescu D, Logothetis C, Dinney C, Kimmel M, Weinstein JN, McConkey DJ, Czerniak B. Assessment of Luminal and Basal Phenotypes in Bladder Cancer. Sci Rep. 2020 Jun 16; 10(1):9743. PMID: 32546765.
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    2. Yang G, Bondaruk J, Cogdell D, Wang Z, Lee S, Lee JG, Zhang S, Choi W, Wang Y, Liang Y, Wang G, Wang Y, Yao H, Dadhania V, Gao J, Logothetis C, Siefker-Radtke A, Kamat A, Dinney C, Theodorescu D, Kimmel M, Wei P, Guo CC, Weinstein JN, McConkey DJ, Czerniak B. Urothelial-to-Neural Plasticity Drives Progression to Small Cell Bladder Cancer. iScience. 2020 Jun 26; 23(6):101201. PMID: 32521509.
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    3. Lubkowski J, Vanegas J, Chan WK, Lorenzi PL, Weinstein JN, Sukharev S, Fushman D, Rempe S, Anishkin A, Wlodawer A. Mechanism of Catalysis by l-Asparaginase. Biochemistry. 2020 May 26; 59(20):1927-1945. PMID: 32364696.
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    4. Yuan Y, Ju YS, Kim Y, Li J, Wang Y, Yoon CJ, Yang Y, Martincorena I, Creighton CJ, Weinstein JN, Xu Y, Han L, Kim HL, Nakagawa H, Park K, Campbell PJ, Liang H. Author Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers. Nat Genet. 2020 Apr 27. PMID: 32341528.
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    5. Yuan Y, Ju YS, Kim Y, Li J, Wang Y, Yoon CJ, Yang Y, Martincorena I, Creighton CJ, Weinstein JN, Xu Y, Han L, Kim HL, Nakagawa H, Park K, Campbell PJ, Liang H. Publisher Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers. Nat Genet. 2020 Feb 11. PMID: 32047324.
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    6. Kamoun A, de Reyniès A, Allory Y, Sjödahl G, Robertson AG, Seiler R, Hoadley KA, Groeneveld CS, Al-Ahmadie H, Choi W, Castro MAA, Fontugne J, Eriksson P, Mo Q, Kardos J, Zlotta A, Hartmann A, Dinney CP, Bellmunt J, Powles T, Malats N, Chan KS, Kim WY, McConkey DJ, Black PC, Dyrskjøt L, Höglund M, Lerner SP, Real FX, Radvanyi F, Aine M, Bernard-Pierrot I, Czerniak B, Gibb EA, Kim J, Kwiatkowski DJ, Lebret T, Liedberg F, Siefker-Radtke AA, Sirab N, Taber A, Weinstein JN. Reply To Kenneth B. Yatai, Mark J. Dunning, Dennis Wang. Consensus Genomic Subtypes of Muscle-invasive Bladder Cancer: A Step in the Right Direction but Still a Long Way To Go. Eur Urol 2020;77:434-5. Eur Urol. 2020 Apr; 77(4):436-438. PMID: 32037144.
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    7. Yuan Y, Ju YS, Kim Y, Li J, Wang Y, Yoon CJ, Yang Y, Martincorena I, Creighton CJ, Weinstein JN, Xu Y, Han L, Kim HL, Nakagawa H, Park K, Campbell PJ, Liang H. Comprehensive molecular characterization of mitochondrial genomes in human cancers. Nat Genet. 2020 03; 52(3):342-352. PMID: 32024997.
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    8. Ryan MC, Stucky M, Wakefield C, Melott JM, Akbani R, Weinstein JN, Broom BM. Interactive Clustered Heat Map Builder: An easy web-based tool for creating sophisticated clustered heat maps. F1000Res. 2019; 8. PMID: 32269754.
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    9. Du D, Chang CH, Wang Y, Tong P, Chan WK, Chiu Y, Peng B, Tan L, Weinstein JN, Lorenzi PL. Response envelope analysis for quantitative evaluation of drug combinations. Bioinformatics. 2019 10 01; 35(19):3761-3770. PMID: 30851108.
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    10. Donehower LA, Soussi T, Korkut A, Liu Y, Schultz A, Cardenas M, Li X, Babur O, Hsu TK, Lichtarge O, Weinstein JN, Akbani R, Wheeler DA. Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas. Cell Rep. 2019 Sep 10; 28(11):3010. PMID: 31509758.
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    11. Donehower LA, Soussi T, Korkut A, Liu Y, Schultz A, Cardenas M, Li X, Babur O, Hsu TK, Lichtarge O, Weinstein JN, Akbani R, Wheeler DA. Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas. Cell Rep. 2019 07 30; 28(5):1370-1384.e5. PMID: 31365877.
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    12. Chan WK, Horvath TD, Tan L, Link T, Harutyunyan KG, Pontikos MA, Anishkin A, Du D, Martin LA, Yin E, Rempe SB, Sukharev S, Konopleva M, Weinstein JN, Lorenzi PL. Glutaminase Activity of L-Asparaginase Contributes to Durable Preclinical Activity against Acute Lymphoblastic Leukemia. Mol Cancer Ther. 2019 09; 18(9):1587-1592. PMID: 31209181.
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    13. Guo CC, Majewski T, Zhang L, Yao H, Bondaruk J, Wang Y, Zhang S, Wang Z, Lee JG, Lee S, Cogdell D, Zhang M, Wei P, Grossman HB, Kamat A, Duplisea JJ, Ferguson JE, Huang H, Dadhania V, Gao J, Dinney C, Weinstein JN, Baggerly K, McConkey D, Czerniak B. Dysregulation of EMT Drives the Progression to Clinically Aggressive Sarcomatoid Bladder Cancer. Cell Rep. 2019 05 07; 27(6):1781-1793.e4. PMID: 31067463.
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    14. Wang F, Zhang S, Kim TB, Lin YY, Iqbal R, Wang Z, Mohanty V, Sircar K, Karam JA, Wendl MC, Meric-Bernstam F, Weinstein JN, Ding L, Mills GB, Chen K. Integrated transcriptomic-genomic tool Texomer profiles cancer tissues. Nat Methods. 2019 05; 16(5):401-404. PMID: 30988467.
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    15. Chen T, Du D, Chen J, Zhou P, Weinstein JN, Yao L, Liu Y. ZC3H12A Expression in Different Stages of Colorectal Cancer. Oncoscience. 2019 Mar; 6(3-4):301-311. PMID: 31106233.
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    16. Majewski T, Yao H, Bondaruk J, Chung W, Lee S, Lee JG, Zhang S, Cogdell D, Yang G, Choi W, Dinney C, Grossman HB, Logothetis C, Scherer SE, Guo CC, Zhang L, Wei P, Weinstein JN, Issa JP, Baggerly K, McConkey DJ, Czerniak B. Whole-Organ Genomic Characterization of Mucosal Field Effects Initiating Bladder Carcinogenesis. Cell Rep. 2019 02 19; 26(8):2241-2256.e4. PMID: 30784602.
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    17. Du D, Tan L, Wang Y, Peng B, Weinstein JN, Wondisford FE, Su X, Lorenzi PL. ElemCor: accurate data analysis and enrichment calculation for high-resolution LC-MS stable isotope labeling experiments. BMC Bioinformatics. 2019 Feb 19; 20(1):89. PMID: 30782135.
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    18. Horvath TD, Chan WK, Pontikos MA, Martin LA, Du D, Tan L, Konopleva M, Weinstein JN, Lorenzi PL. Assessment of l-Asparaginase Pharmacodynamics in Mouse Models of Cancer. Metabolites. 2019 Jan 09; 9(1). PMID: 30634463.
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    19. Zhang Z, Ye Y, Gong J, Ruan H, Liu CJ, Xiang Y, Cai C, Guo AY, Ling J, Diao L, Weinstein JN, Han L. Global analysis of tRNA and translation factor expression reveals a dynamic landscape of translational regulation in human cancers. Commun Biol. 2018; 1:234. PMID: 30588513.
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    20. Peng B, Wang G, Ma J, Leong MC, Wakefield C, Melott J, Chiu Y, Du D, Weinstein JN. SoS Notebook: an interactive multi-language data analysis environment. Bioinformatics. 2018 11 01; 34(21):3768-3770. PMID: 29790910.
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    21. Korkut A, Zaidi S, Kanchi RS, Rao S, Gough NR, Schultz A, Li X, Lorenzi PL, Berger AC, Robertson G, Kwong LN, Datto M, Roszik J, Ling S, Ravikumar V, Manyam G, Rao A, Shelley S, Liu Y, Ju Z, Hansel D, de Velasco G, Pennathur A, Andersen JB, O'Rourke CJ, Ohshiro K, Jogunoori W, Nguyen BN, Li S, Osmanbeyoglu HU, Ajani JA, Mani SA, Houseman A, Wiznerowicz M, Chen J, Gu S, Ma W, Zhang J, Tong P, Cherniack AD, Deng C, Resar L, Weinstein JN, Mishra L, Akbani R. A Pan-Cancer Analysis Reveals High-Frequency Genetic Alterations in Mediators of Signaling by the TGF-ß Superfamily. Cell Syst. 2018 10 24; 7(4):422-437.e7. PMID: 30268436.
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    22. Robertson AG, Kim J, Al-Ahmadie H, Bellmunt J, Guo G, Cherniack AD, Hinoue T, Laird PW, Hoadley KA, Akbani R, Castro MAA, Gibb EA, Kanchi RS, Gordenin DA, Shukla SA, Sanchez-Vega F, Hansel DE, Czerniak BA, Reuter VE, Su X, de Sa Carvalho B, Chagas VS, Mungall KL, Sadeghi S, Pedamallu CS, Lu Y, Klimczak LJ, Zhang J, Choo C, Ojesina AI, Bullman S, Leraas KM, Lichtenberg TM, Wu CJ, Schultz N, Getz G, Meyerson M, Mills GB, McConkey DJ, Weinstein JN, Kwiatkowski DJ, Lerner SP. Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer. Cell. 2018 08 09; 174(4):1033. PMID: 30096301.
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    23. Du D, Yuan J, Ma W, Ning J, Weinstein JN, Yuan X, Fuller GN, Liu Y. Clinical significance of FBXO17 gene expression in high-grade glioma. BMC Cancer. 2018 Jul 31; 18(1):773. PMID: 30064493.
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    24. Du D, Ma W, Yates MS, Chen T, Lu KH, Lu Y, Weinstein JN, Broaddus RR, Mills GB, Liu Y. Predicting high-risk endometrioid carcinomas using proteins. Oncotarget. 2018 Apr 13; 9(28):19704-19715. PMID: 29731976.
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    25. Thorsson V, Gibbs DL, Brown SD, Wolf D, Bortone DS, Ou Yang TH, Porta-Pardo E, Gao GF, Plaisier CL, Eddy JA, Ziv E, Culhane AC, Paull EO, Sivakumar IKA, Gentles AJ, Malhotra R, Farshidfar F, Colaprico A, Parker JS, Mose LE, Vo NS, Liu J, Liu Y, Rader J, Dhankani V, Reynolds SM, Bowlby R, Califano A, Cherniack AD, Anastassiou D, Bedognetti D, Mokrab Y, Newman AM, Rao A, Chen K, Krasnitz A, Hu H, Malta TM, Noushmehr H, Pedamallu CS, Bullman S, Ojesina AI, Lamb A, Zhou W, Shen H, Choueiri TK, Weinstein JN, Guinney J, Saltz J, Holt RA, Rabkin CS, Lazar AJ, Serody JS, Demicco EG, Disis ML, Vincent BG, Shmulevich I. The Immune Landscape of Cancer. Immunity. 2018 04 17; 48(4):812-830.e14. PMID: 29628290.
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    26. Chen H, Li C, Peng X, Zhou Z, Weinstein JN, Liang H. A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples. Cell. 2018 04 05; 173(2):386-399.e12. PMID: 29625054.
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    27. Malta TM, Sokolov A, Gentles AJ, Burzykowski T, Poisson L, Weinstein JN, Kaminska B, Huelsken J, Omberg L, Gevaert O, Colaprico A, Czerwinska P, Mazurek S, Mishra L, Heyn H, Krasnitz A, Godwin AK, Lazar AJ, Stuart JM, Hoadley KA, Laird PW, Noushmehr H, Wiznerowicz M. Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation. Cell. 2018 04 05; 173(2):338-354.e15. PMID: 29625051.
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    28. Peng X, Chen Z, Farshidfar F, Xu X, Lorenzi PL, Wang Y, Cheng F, Tan L, Mojumdar K, Du D, Ge Z, Li J, Thomas GV, Birsoy K, Liu L, Zhang H, Zhao Z, Marchand C, Weinstein JN, Bathe OF, Liang H. Molecular Characterization and Clinical Relevance of Metabolic Expression Subtypes in Human Cancers. Cell Rep. 2018 04 03; 23(1):255-269.e4. PMID: 29617665.
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    29. Knijnenburg TA, Wang L, Zimmermann MT, Chambwe N, Gao GF, Cherniack AD, Fan H, Shen H, Way GP, Greene CS, Liu Y, Akbani R, Feng B, Donehower LA, Miller C, Shen Y, Karimi M, Chen H, Kim P, Jia P, Shinbrot E, Zhang S, Liu J, Hu H, Bailey MH, Yau C, Wolf D, Zhao Z, Weinstein JN, Li L, Ding L, Mills GB, Laird PW, Wheeler DA, Shmulevich I, Monnat RJ, Xiao Y, Wang C. Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas. Cell Rep. 2018 04 03; 23(1):239-254.e6. PMID: 29617664.
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    30. Campbell JD, Yau C, Bowlby R, Liu Y, Brennan K, Fan H, Taylor AM, Wang C, Walter V, Akbani R, Byers LA, Creighton CJ, Coarfa C, Shih J, Cherniack AD, Gevaert O, Prunello M, Shen H, Anur P, Chen J, Cheng H, Hayes DN, Bullman S, Pedamallu CS, Ojesina AI, Sadeghi S, Mungall KL, Robertson AG, Benz C, Schultz A, Kanchi RS, Gay CM, Hegde A, Diao L, Wang J, Ma W, Sumazin P, Chiu HS, Chen TW, Gunaratne P, Donehower L, Rader JS, Zuna R, Al-Ahmadie H, Lazar AJ, Flores ER, Tsai KY, Zhou JH, Rustgi AK, Drill E, Shen R, Wong CK, Stuart JM, Laird PW, Hoadley KA, Weinstein JN, Peto M, Pickering CR, Chen Z, Van Waes C. Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas. Cell Rep. 2018 04 03; 23(1):194-212.e6. PMID: 29617660.
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    31. Berger AC, Korkut A, Kanchi RS, Hegde AM, Lenoir W, Liu W, Liu Y, Fan H, Shen H, Ravikumar V, Rao A, Schultz A, Li X, Sumazin P, Williams C, Mestdagh P, Gunaratne PH, Yau C, Bowlby R, Robertson AG, Tiezzi DG, Wang C, Cherniack AD, Godwin AK, Kuderer NM, Rader JS, Zuna RE, Sood AK, Lazar AJ, Ojesina AI, Adebamowo C, Adebamowo SN, Baggerly KA, Chen TW, Chiu HS, Lefever S, Liu L, MacKenzie K, Orsulic S, Roszik J, Shelley CS, Song Q, Vellano CP, Wentzensen N, Weinstein JN, Mills GB, Levine DA, Akbani R. A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers. Cancer Cell. 2018 04 09; 33(4):690-705.e9. PMID: 29622464.
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    32. Radovich M, Pickering CR, Felau I, Ha G, Zhang H, Jo H, Hoadley KA, Anur P, Zhang J, McLellan M, Bowlby R, Matthew T, Danilova L, Hegde AM, Kim J, Leiserson MDM, Sethi G, Lu C, Ryan M, Su X, Cherniack AD, Robertson G, Akbani R, Spellman P, Weinstein JN, Hayes DN, Raphael B, Lichtenberg T, Leraas K, Zenklusen JC, Fujimoto J, Scapulatempo-Neto C, Moreira AL, Hwang D, Huang J, Marino M, Korst R, Giaccone G, Gokmen-Polar Y, Badve S, Rajan A, Ströbel P, Girard N, Tsao MS, Marx A, Tsao AS, Loehrer PJ. The Integrated Genomic Landscape of Thymic Epithelial Tumors. Cancer Cell. 2018 02 12; 33(2):244-258.e10. PMID: 29438696.
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    33. Broom BM, Ryan MC, Brown RE, Ikeda F, Stucky M, Kane DW, Melott J, Wakefield C, Casasent TD, Akbani R, Weinstein JN. A Galaxy Implementation of Next-Generation Clustered Heatmaps for Interactive Exploration of Molecular Profiling Data. Cancer Res. 2017 11 01; 77(21):e23-e26. PMID: 29092932.
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    34. Li J, Akbani R, Zhao W, Lu Y, Weinstein JN, Mills GB, Liang H. Explore, Visualize, and Analyze Functional Cancer Proteomic Data Using the Cancer Proteome Atlas. Cancer Res. 2017 11 01; 77(21):e51-e54. PMID: 29092939.
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    35. Robertson AG, Kim J, Al-Ahmadie H, Bellmunt J, Guo G, Cherniack AD, Hinoue T, Laird PW, Hoadley KA, Akbani R, Castro MAA, Gibb EA, Kanchi RS, Gordenin DA, Shukla SA, Sanchez-Vega F, Hansel DE, Czerniak BA, Reuter VE, Su X, de Sa Carvalho B, Chagas VS, Mungall KL, Sadeghi S, Pedamallu CS, Lu Y, Klimczak LJ, Zhang J, Choo C, Ojesina AI, Bullman S, Leraas KM, Lichtenberg TM, Wu CJ, Schultz N, Getz G, Meyerson M, Mills GB, McConkey DJ, Weinstein JN, Kwiatkowski DJ, Lerner SP. Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer. Cell. 2017 Oct 19; 171(3):540-556.e25. PMID: 28988769.
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    36. Su X, Zhang J, Mouawad R, Compérat E, Rouprêt M, Allanic F, Parra J, Bitker MO, Thompson EJ, Gowrishankar B, Houldsworth J, Weinstein JN, Tost J, Broom BM, Khayat D, Spano JP, Tannir NM, Malouf GG. NSD1 Inactivation and SETD2 Mutation Drive a Convergence toward Loss of Function of H3K36 Writers in Clear Cell Renal Cell Carcinomas. Cancer Res. 2017 09 15; 77(18):4835-4845. PMID: 28754676.
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    37. Zhang Y, Kwok-Shing Ng P, Kucherlapati M, Chen F, Liu Y, Tsang YH, de Velasco G, Jeong KJ, Akbani R, Hadjipanayis A, Pantazi A, Bristow CA, Lee E, Mahadeshwar HS, Tang J, Zhang J, Yang L, Seth S, Lee S, Ren X, Song X, Sun H, Seidman J, Luquette LJ, Xi R, Chin L, Protopopov A, Westbrook TF, Shelley CS, Choueiri TK, Ittmann M, Van Waes C, Weinstein JN, Liang H, Henske EP, Godwin AK, Park PJ, Kucherlapati R, Scott KL, Mills GB, Kwiatkowski DJ, Creighton CJ. A Pan-Cancer Proteogenomic Atlas of PI3K/AKT/mTOR Pathway Alterations. Cancer Cell. 2017 06 12; 31(6):820-832.e3. PMID: 28528867.
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    38. Cherniack AD, Shen H, Walter V, Stewart C, Murray BA, Bowlby R, Hu X, Ling S, Soslow RA, Broaddus RR, Zuna RE, Robertson G, Laird PW, Kucherlapati R, Mills GB, Weinstein JN, Zhang J, Akbani R, Levine DA. Integrated Molecular Characterization of Uterine Carcinosarcoma. Cancer Cell. 2017 03 13; 31(3):411-423. PMID: 28292439.
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    39. Johanning GL, Malouf GG, Zheng X, Esteva FJ, Weinstein JN, Wang-Johanning F, Su X. Expression of human endogenous retrovirus-K is strongly associated with the basal-like breast cancer phenotype. Sci Rep. 2017 02 06; 7:41960. PMID: 28165048.
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    40. Dadhania V, Zhang M, Zhang L, Bondaruk J, Majewski T, Siefker-Radtke A, Guo CC, Dinney C, Cogdell DE, Zhang S, Lee S, Lee JG, Weinstein JN, Baggerly K, McConkey D, Czerniak B. Meta-Analysis of the Luminal and Basal Subtypes of Bladder Cancer and the Identification of Signature Immunohistochemical Markers for Clinical Use. EBioMedicine. 2016 Oct; 12:105-117. PMID: 27612592.
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    41. Campbell JD, Alexandrov A, Kim J, Wala J, Berger AH, Pedamallu CS, Shukla SA, Guo G, Brooks AN, Murray BA, Imielinski M, Hu X, Ling S, Akbani R, Rosenberg M, Cibulskis C, Ramachandran A, Collisson EA, Kwiatkowski DJ, Lawrence MS, Weinstein JN, Verhaak RG, Wu CJ, Hammerman PS, Cherniack AD, Getz G, Artyomov MN, Schreiber R, Govindan R, Meyerson M. Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas. Nat Genet. 2016 06; 48(6):607-16. PMID: 27158780.
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    42. Chen J, Raju GS, Jogunoori W, Menon V, Majumdar A, Chen JS, Gi YJ, Jeong YS, Phan L, Belkin M, Gu S, Kundra S, Mistry NA, Zhang J, Su X, Li S, Lin SH, Javle M, McMurray JS, Rahlfs TF, Mishra B, White J, Rashid A, Beauchemin N, Weston BR, Shafi MA, Stroehlein JR, Davila M, Akbani R, Weinstein JN, Wu X, Mishra L. Mutational Profiles Reveal an Aberrant TGF-ß-CEA Regulated Pathway in Colon Adenomas. PLoS One. 2016; 11(4):e0153933. PMID: 27100181.
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    43. Yao J, Caballero OL, Huang Y, Lin C, Rimoldi D, Behren A, Cebon JS, Hung MC, Weinstein JN, Strausberg RL, Zhao Q. Altered Expression and Splicing of ESRP1 in Malignant Melanoma Correlates with Epithelial-Mesenchymal Status and Tumor-Associated Immune Cytolytic Activity. Cancer Immunol Res. 2016 06; 4(6):552-61. PMID: 27045022.
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    44. Guo CC, Dadhania V, Zhang L, Majewski T, Bondaruk J, Sykulski M, Wronowska W, Gambin A, Wang Y, Zhang S, Fuentes-Mattei E, Kamat AM, Dinney C, Siefker-Radtke A, Choi W, Baggerly KA, McConkey D, Weinstein JN, Czerniak B. Gene Expression Profile of the Clinically Aggressive Micropapillary Variant of Bladder Cancer. Eur Urol. 2016 10; 70(4):611-620. PMID: 26988609.
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    45. Jiang Y, Malouf GG, Zhang J, Zheng X, Chen Y, Thompson EJ, Weinstein JN, Yuan Y, Spano JP, Broaddus R, Tannir NM, Khayat D, Lu KH, Su X. Long non-coding RNA profiling links subgroup classification of endometrioid endometrial carcinomas with trithorax and polycomb complex aberrations. Oncotarget. 2015 Nov 24; 6(37):39865-76. PMID: 26431491.
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    46. Ryan M, Wong WC, Brown R, Akbani R, Su X, Broom B, Melott J, Weinstein J. TCGASpliceSeq a compendium of alternative mRNA splicing in cancer. Nucleic Acids Res. 2016 Jan 04; 44(D1):D1018-22. PMID: 26602693.
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    47. Linehan WM, Spellman PT, Ricketts CJ, Creighton CJ, Fei SS, Davis C, Wheeler DA, Murray BA, Schmidt L, Vocke CD, Peto M, Al Mamun AA, Shinbrot E, Sethi A, Brooks S, Rathmell WK, Brooks AN, Hoadley KA, Robertson AG, Brooks D, Bowlby R, Sadeghi S, Shen H, Weisenberger DJ, Bootwalla M, Baylin SB, Laird PW, Cherniack AD, Saksena G, Haake S, Li J, Liang H, Lu Y, Mills GB, Akbani R, Leiserson MD, Raphael BJ, Anur P, Bottaro D, Albiges L, Barnabas N, Choueiri TK, Czerniak B, Godwin AK, Hakimi AA, Ho TH, Hsieh J, Ittmann M, Kim WY, Krishnan B, Merino MJ, Mills Shaw KR, Reuter VE, Reznik E, Shelley CS, Shuch B, Signoretti S, Srinivasan R, Tamboli P, Thomas G, Tickoo S, Burnett K, Crain D, Gardner J, Lau K, Mallery D, Morris S, Paulauskis JD, Penny RJ, Shelton C, Shelton WT, Sherman M, Thompson E, Yena P, Avedon MT, Bowen J, Gastier-Foster JM, Gerken M, Leraas KM, Lichtenberg TM, Ramirez NC, Santos T, Wise L, Zmuda E, Demchok JA, Felau I, Hutter CM, Sheth M, Sofia HJ, Tarnuzzer R, Wang Z, Yang L, Zenklusen JC, Zhang J, Ayala B, Baboud J, Chudamani S, Liu J, Lolla L, Naresh R, Pihl T, Sun Q, Wan Y, Wu Y, Ally A, Balasundaram M, Balu S, Beroukhim R, Bodenheimer T, Buhay C, Butterfield YS, Carlsen R, Carter SL, Chao H, Chuah E, Clarke A, Covington KR, Dahdouli M, Dewal N, Dhalla N, Doddapaneni HV, Drummond JA, Gabriel SB, Gibbs RA, Guin R, Hale W, Hawes A, Hayes DN, Holt RA, Hoyle AP, Jefferys SR, Jones SJ, Jones CD, Kalra D, Kovar C, Lewis L, Li J, Ma Y, Marra MA, Mayo M, Meng S, Meyerson M, Mieczkowski PA, Moore RA, Morton D, Mose LE, Mungall AJ, Muzny D, Parker JS, Perou CM, Roach J, Schein JE, Schumacher SE, Shi Y, Simons JV, Sipahimalani P, Skelly T, Soloway MG, Sougnez C, Tam A, Tan D, Thiessen N, Veluvolu U, Wang M, Wilkerson MD, Wong T, Wu J, Xi L, Zhou J, Bedford J, Chen F, Fu Y, Gerstein M, Haussler D, Kasaian K, Lai P, Ling S, Radenbaugh A, Van Den Berg D, Weinstein JN, Zhu J, Albert M, Alexopoulou I, Andersen JJ, Auman JT, Bartlett J, Bastacky S, Bergsten J, Blute ML, Boice L, Bollag RJ, Boyd J, Castle E, Chen YB, Cheville JC, Curley E, Davies B, DeVolk A, Dhir R, Dike L, Eckman J, Engel J, Harr J, Hrebinko R, Huang M, Huelsenbeck-Dill L, Iacocca M, Jacobs B, Lobis M, Maranchie JK, McMeekin S, Myers J, Nelson J, Parfitt J, Parwani A, Petrelli N, Rabeno B, Roy S, Salner AL, Slaton J, Stanton M, Thompson RH, Thorne L, Tucker K, Weinberger PM, Winemiller C, Zach LA, Zuna R. Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma. N Engl J Med. 2016 Jan 14; 374(2):135-45. PMID: 26536169.
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    48. Zhou W, Chen T, Chong Z, Rohrdanz MA, Melott JM, Wakefield C, Zeng J, Weinstein JN, Meric-Bernstam F, Mills GB, Chen K. TransVar: a multilevel variant annotator for precision genomics. Nat Methods. 2015 Nov; 12(11):1002-3. PMID: 26513549.
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    49. Kim J, Akbani R, Creighton CJ, Lerner SP, Weinstein JN, Getz G, Kwiatkowski DJ. Invasive Bladder Cancer: Genomic Insights and Therapeutic Promise. Clin Cancer Res. 2015 Oct 15; 21(20):4514-24. PMID: 26473186.
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    50. Mak MP, Tong P, Diao L, Cardnell RJ, Gibbons DL, William WN, Skoulidis F, Parra ER, Rodriguez-Canales J, Wistuba II, Heymach JV, Weinstein JN, Coombes KR, Wang J, Byers LA. A Patient-Derived, Pan-Cancer EMT Signature Identifies Global Molecular Alterations and Immune Target Enrichment Following Epithelial-to-Mesenchymal Transition. Clin Cancer Res. 2016 Feb 01; 22(3):609-20. PMID: 26420858.
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    110. Deus HF, Veiga DF, Freire PR, Weinstein JN, Mills GB, Almeida JS. Exposing the cancer genome atlas as a SPARQL endpoint. J Biomed Inform. 2010 Dec; 43(6):998-1008. PMID: 20851208.
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    111. Solier S, Barb J, Zeeberg BR, Varma S, Ryan MC, Kohn KW, Weinstein JN, Munson PJ, Pommier Y. Genome-wide analysis of novel splice variants induced by topoisomerase I poisoning shows preferential occurrence in genes encoding splicing factors. Cancer Res. 2010 Oct 15; 70(20):8055-65. PMID: 20817775.
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    112. Kahn AB, Zeeberg BR, Ryan MC, Jamison DC, Rockoff DM, Pommier Y, Weinstein JN. Ontogenomic study of the relationship between number of gene splice variants and GO categorization. Bioinformatics. 2010 Aug 15; 26(16):1945-9. PMID: 20616384.
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    113. Liu H, D'Andrade P, Fulmer-Smentek S, Lorenzi P, Kohn KW, Weinstein JN, Pommier Y, Reinhold WC. mRNA and microRNA expression profiles of the NCI-60 integrated with drug activities. Mol Cancer Ther. 2010 May; 9(5):1080-91. PMID: 20442302.
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    114. Reinhold WC, Mergny JL, Liu H, Ryan M, Pfister TD, Kinders R, Parchment R, Doroshow J, Weinstein JN, Pommier Y. Exon array analyses across the NCI-60 reveal potential regulation of TOP1 by transcription pausing at guanosine quartets in the first intron. Cancer Res. 2010 Mar 15; 70(6):2191-203. PMID: 20215517.
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    115. Lu JJ, Meng LH, Shankavaram UT, Zhu CH, Tong LJ, Chen G, Lin LP, Weinstein JN, Ding J. Dihydroartemisinin accelerates c-MYC oncoprotein degradation and induces apoptosis in c-MYC-overexpressing tumor cells. Biochem Pharmacol. 2010 Jul 01; 80(1):22-30. PMID: 20206143.
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    116. Hanczar B, Hua J, Sima C, Weinstein J, Bittner M, Dougherty ER. Small-sample precision of ROC-related estimates. Bioinformatics. 2010 Mar 15; 26(6):822-30. PMID: 20130029.
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    117. Park ES, Rabinovsky R, Carey M, Hennessy BT, Agarwal R, Liu W, Ju Z, Deng W, Lu Y, Woo HG, Kim SB, Cheong JH, Garraway LA, Weinstein JN, Mills GB, Lee JS, Davies MA. Integrative analysis of proteomic signatures, mutations, and drug responsiveness in the NCI 60 cancer cell line set. Mol Cancer Ther. 2010 Feb; 9(2):257-67. PMID: 20124458.
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    118. Reinhold WC, Reimers MA, Lorenzi P, Ho J, Shankavaram UT, Ziegler MS, Bussey KJ, Nishizuka S, Ikediobi O, Pommier YG, Weinstein JN. Multifactorial regulation of E-cadherin expression: an integrative study. Mol Cancer Ther. 2010 Jan; 9(1):1-16. PMID: 20053763.
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    119. Libon DJ, McMillan C, Gunawardena D, Powers C, Massimo L, Khan A, Morgan B, Farag C, Richmond L, Weinstein J, Moore P, Coslett HB, Chatterjee A, Aguirre G, Grossman M. Neurocognitive contributions to verbal fluency deficits in frontotemporal lobar degeneration. Neurology. 2009 Aug 18; 73(7):535-42. PMID: 19687454.
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    120. Kohn KW, Aladjem MI, Weinstein JN, Pommier Y. Network architecture of signaling from uncoupled helicase-polymerase to cell cycle checkpoints and trans-lesion DNA synthesis. Cell Cycle. 2009 Jul 15; 8(14):2281-99. PMID: 19556879.
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    121. Orina JN, Calcagno AM, Wu CP, Varma S, Shih J, Lin M, Eichler G, Weinstein JN, Pommier Y, Ambudkar SV, Gottesman MM, Gillet JP. Evaluation of current methods used to analyze the expression profiles of ATP-binding cassette transporters yields an improved drug-discovery database. Mol Cancer Ther. 2009 Jul; 8(7):2057-66. PMID: 19584229.
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    122. Shankavaram UT, Varma S, Kane D, Sunshine M, Chary KK, Reinhold WC, Pommier Y, Weinstein JN. CellMiner: a relational database and query tool for the NCI-60 cancer cell lines. BMC Genomics. 2009 Jun 23; 10:277. PMID: 19549304.
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    123. Lorenzi PL, Reinhold WC, Varma S, Hutchinson AA, Pommier Y, Chanock SJ, Weinstein JN. DNA fingerprinting of the NCI-60 cell line panel. Mol Cancer Ther. 2009 Apr; 8(4):713-24. PMID: 19372543.
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    124. Lorenzi PL, Weinstein JN. Asparagine synthetase: a new potential biomarker in ovarian cancer. Drug News Perspect. 2009 Jan-Feb; 22(1):61-4. PMID: 19209300.
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    125. Aebersold R, Auffray C, Baney E, Barillot E, Brazma A, Brett C, Brunak S, Butte A, Califano A, Celis J, Cufer T, Ferrell J, Galas D, Gallahan D, Gatenby R, Goldbeter A, Hace N, Henney A, Hood L, Iyengar R, Jackson V, Kallioniemi O, Klingmüller U, Kolar P, Kolch W, Kyriakopoulou C, Laplace F, Lehrach H, Marcus F, Matrisian L, Nolan G, Pelkmans L, Potti A, Sander C, Seljak M, Singer D, Sorger P, Stunnenberg H, Superti-Furga G, Uhlen M, Vidal M, Weinstein J, Wigle D, Williams M, Wolkenhauer O, Zhivotovsky B, Zinovyev A, Zupan B. Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008). Mol Oncol. 2009 Feb; 3(1):9-17. PMID: 19383362.
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    126. Roschke AV, Glebov OK, Lababidi S, Gehlhaus KS, Weinstein JN, Kirsch IR. Chromosomal instability is associated with higher expression of genes implicated in epithelial-mesenchymal transition, cancer invasiveness, and metastasis and with lower expression of genes involved in cell cycle checkpoints, DNA repair, and chromatin maintenance. Neoplasia. 2008 Nov; 10(11):1222-30. PMID: 18953431.
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    127. Lorenzi PL, Llamas J, Gunsior M, Ozbun L, Reinhold WC, Varma S, Ji H, Kim H, Hutchinson AA, Kohn EC, Goldsmith PK, Birrer MJ, Weinstein JN. Asparagine synthetase is a predictive biomarker of L-asparaginase activity in ovarian cancer cell lines. Mol Cancer Ther. 2008 Oct; 7(10):3123-8. PMID: 18852115.
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    128. Comprehensive genomic characterization defines human glioblastoma genes and core pathways. Nature. 2008 Oct 23; 455(7216):1061-8. PMID: 18772890.
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    129. Okabe M, Szakács G, Reimers MA, Suzuki T, Hall MD, Abe T, Weinstein JN, Gottesman MM. Profiling SLCO and SLC22 genes in the NCI-60 cancer cell lines to identify drug uptake transporters. Mol Cancer Ther. 2008 Sep; 7(9):3081-91. PMID: 18790787.
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    130. Ryan MC, Zeeberg BR, Caplen NJ, Cleland JA, Kahn AB, Liu H, Weinstein JN. SpliceCenter: a suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi, microarray, and peptide-based studies. BMC Bioinformatics. 2008 Jul 18; 9:313. PMID: 18638396.
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    131. Ikediobi ON, Reimers M, Durinck S, Blower PE, Futreal AP, Stratton MR, Weinstein JN. In vitro differential sensitivity of melanomas to phenothiazines is based on the presence of codon 600 BRAF mutation. Mol Cancer Ther. 2008 Jun; 7(6):1337-46. PMID: 18524847.
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    132. Weinstein JN. Biochemistry. A postgenomic visual icon. Science. 2008 Mar 28; 319(5871):1772-3. PMID: 18369130.
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    133. Boersma BJ, Reimers M, Yi M, Ludwig JA, Luke BT, Stephens RM, Yfantis HG, Lee DH, Weinstein JN, Ambs S. A stromal gene signature associated with inflammatory breast cancer. Int J Cancer. 2008 Mar 15; 122(6):1324-32. PMID: 17999412.
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    134. Neumann H, Hazen JL, Weinstein J, Mehl RA, Chin JW. Genetically encoding protein oxidative damage. J Am Chem Soc. 2008 Mar 26; 130(12):4028-33. PMID: 18321101.
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    135. Kestler HA, Müller A, Kraus JM, Buchholz M, Gress TM, Liu H, Kane DW, Zeeberg BR, Weinstein JN. VennMaster: area-proportional Euler diagrams for functional GO analysis of microarrays. BMC Bioinformatics. 2008 Jan 29; 9:67. PMID: 18230172.
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    136. Amundson SA, Do KT, Vinikoor LC, Lee RA, Koch-Paiz CA, Ahn J, Reimers M, Chen Y, Scudiero DA, Weinstein JN, Trent JM, Bittner ML, Meltzer PS, Fornace AJ. Integrating global gene expression and radiation survival parameters across the 60 cell lines of the National Cancer Institute Anticancer Drug Screen. Cancer Res. 2008 Jan 15; 68(2):415-24. PMID: 18199535.
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    137. Stevens EV, Nishizuka S, Antony S, Reimers M, Varma S, Young L, Munson PJ, Weinstein JN, Kohn EC, Pommier Y. Predicting cisplatin and trabectedin drug sensitivity in ovarian and colon cancers. Mol Cancer Ther. 2008 Jan; 7(1):10-8. PMID: 18187810.
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    138. Blower PE, Chung JH, Verducci JS, Lin S, Park JK, Dai Z, Liu CG, Schmittgen TD, Reinhold WC, Croce CM, Weinstein JN, Sadee W. MicroRNAs modulate the chemosensitivity of tumor cells. Mol Cancer Ther. 2008 Jan; 7(1):1-9. PMID: 18187804.
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    139. Ruden DM, Jamison DC, Zeeberg BR, Garfinkel MD, Weinstein JN, Rasouli P, Lu X. The EDGE hypothesis: epigenetically directed genetic errors in repeat-containing proteins (RCPs) involved in evolution, neuroendocrine signaling, and cancer. Front Neuroendocrinol. 2008 Jun; 29(3):428-44. PMID: 18295320.
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    140. Patterson AD, Li H, Eichler GS, Krausz KW, Weinstein JN, Fornace AJ, Gonzalez FJ, Idle JR. UPLC-ESI-TOFMS-based metabolomics and gene expression dynamics inspector self-organizing metabolomic maps as tools for understanding the cellular response to ionizing radiation. Anal Chem. 2008 Feb 01; 80(3):665-74. PMID: 18173289.
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    141. Ashworth A, Balkwill F, Bast RC, Berek JS, Kaye A, Boyd JA, Mills G, Weinstein JN, Woolley K, Workman P. Opportunities and challenges in ovarian cancer research, a perspective from the 11th Ovarian cancer action/HHMT Forum, Lake Como, March 2007. Gynecol Oncol. 2008 Mar; 108(3):652-7. PMID: 18096210.
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    142. Kohn KW, Aladjem MI, Weinstein JN, Pommier Y. Chromatin challenges during DNA replication: a systems representation. Mol Biol Cell. 2008 Jan; 19(1):1-7. PMID: 17959828.
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    143. Miao ZH, Player A, Shankavaram U, Wang YH, Zimonjic DB, Lorenzi PL, Liao ZY, Liu H, Shimura T, Zhang HL, Meng LH, Zhang YW, Kawasaki ES, Popescu NC, Aladjem MI, Goldstein DJ, Weinstein JN, Pommier Y. Nonclassic functions of human topoisomerase I: genome-wide and pharmacologic analyses. Cancer Res. 2007 Sep 15; 67(18):8752-61. PMID: 17875716.
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    144. Lee JK, Havaleshko DM, Cho H, Weinstein JN, Kaldjian EP, Karpovich J, Grimshaw A, Theodorescu D. A strategy for predicting the chemosensitivity of human cancers and its application to drug discovery. Proc Natl Acad Sci U S A. 2007 Aug 07; 104(32):13086-91. PMID: 17666531.
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    145. Liu H, Zeeberg BR, Qu G, Koru AG, Ferrucci A, Kahn A, Ryan MC, Nuhanovic A, Munson PJ, Reinhold WC, Kane DW, Weinstein JN. AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets. Bioinformatics. 2007 Sep 15; 23(18):2385-90. PMID: 17660211.
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    146. Sheehan KM, Gulmann C, Eichler GS, Weinstein JN, Barrett HL, Kay EW, Conroy RM, Liotta LA, Petricoin EF. Signal pathway profiling of epithelial and stromal compartments of colonic carcinoma reveals epithelial-mesenchymal transition. Oncogene. 2008 Jan 10; 27(3):323-31. PMID: 17621268.
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    147. Blower PE, Verducci JS, Lin S, Zhou J, Chung JH, Dai Z, Liu CG, Reinhold W, Lorenzi PL, Kaldjian EP, Croce CM, Weinstein JN, Sadee W. MicroRNA expression profiles for the NCI-60 cancer cell panel. Mol Cancer Ther. 2007 May; 6(5):1483-91. PMID: 17483436.
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    148. Martin SE, Jones TL, Thomas CL, Lorenzi PL, Nguyen DA, Runfola T, Gunsior M, Weinstein JN, Goldsmith PK, Lader E, Huppi K, Caplen NJ. Multiplexing siRNAs to compress RNAi-based screen size in human cells. Nucleic Acids Res. 2007; 35(8):e57. PMID: 17392344.
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    149. Shankavaram UT, Reinhold WC, Nishizuka S, Major S, Morita D, Chary KK, Reimers MA, Scherf U, Kahn A, Dolginow D, Cossman J, Kaldjian EP, Scudiero DA, Petricoin E, Liotta L, Lee JK, Weinstein JN. Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study. Mol Cancer Ther. 2007 Mar; 6(3):820-32. PMID: 17339364.
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    150. Kahn AB, Ryan MC, Liu H, Zeeberg BR, Jamison DC, Weinstein JN. SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis. BMC Bioinformatics. 2007 Mar 05; 8:75. PMID: 17338820.
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    151. Reinhold WC, Reimers MA, Maunakea AK, Kim S, Lababidi S, Scherf U, Shankavaram UT, Ziegler MS, Stewart C, Kouros-Mehr H, Cui H, Dolginow D, Scudiero DA, Pommier YG, Munroe DJ, Feinberg AP, Weinstein JN. Detailed DNA methylation profiles of the E-cadherin promoter in the NCI-60 cancer cells. Mol Cancer Ther. 2007 Feb; 6(2):391-403. PMID: 17272646.
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    152. Eichler GS, Reimers M, Kane D, Weinstein JN. The LeFE algorithm: embracing the complexity of gene expression in the interpretation of microarray data. Genome Biol. 2007; 8(9):R187. PMID: 17845722.
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    153. Weinstein JN. Spotlight on molecular profiling: "Integromic" analysis of the NCI-60 cancer cell lines. Mol Cancer Ther. 2006 Nov; 5(11):2601-5. PMID: 17088435.
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    154. Ikediobi ON, Davies H, Bignell G, Edkins S, Stevens C, O'Meara S, Santarius T, Avis T, Barthorpe S, Brackenbury L, Buck G, Butler A, Clements J, Cole J, Dicks E, Forbes S, Gray K, Halliday K, Harrison R, Hills K, Hinton J, Hunter C, Jenkinson A, Jones D, Kosmidou V, Lugg R, Menzies A, Mironenko T, Parker A, Perry J, Raine K, Richardson D, Shepherd R, Small A, Smith R, Solomon H, Stephens P, Teague J, Tofts C, Varian J, Webb T, West S, Widaa S, Yates A, Reinhold W, Weinstein JN, Stratton MR, Futreal PA, Wooster R. Mutation analysis of 24 known cancer genes in the NCI-60 cell line set. Mol Cancer Ther. 2006 Nov; 5(11):2606-12. PMID: 17088437.
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    155. Lorenzi PL, Reinhold WC, Rudelius M, Gunsior M, Shankavaram U, Bussey KJ, Scherf U, Eichler GS, Martin SE, Chin K, Gray JW, Kohn EC, Horak ID, Von Hoff DD, Raffeld M, Goldsmith PK, Caplen NJ, Weinstein JN. Asparagine synthetase as a causal, predictive biomarker for L-asparaginase activity in ovarian cancer cells. Mol Cancer Ther. 2006 Nov; 5(11):2613-23. PMID: 17088436.
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    156. Weinstein JN, Pommier Y. Connecting genes, drugs and diseases. Nat Biotechnol. 2006 Nov; 24(11):1365-6. PMID: 17093484.
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    157. Kohn KW, Aladjem MI, Kim S, Weinstein JN, Pommier Y. Depicting combinatorial complexity with the molecular interaction map notation. Mol Syst Biol. 2006; 2:51. PMID: 17016517.
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    158. Meng LH, Shankavaram U, Chen C, Agama K, Fu HQ, Gonzalez FJ, Weinstein J, Pommier Y. Activation of aminoflavone (NSC 686288) by a sulfotransferase is required for the antiproliferative effect of the drug and for induction of histone gamma-H2AX. Cancer Res. 2006 Oct 01; 66(19):9656-64. PMID: 17018623.
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    159. Riss J, Khanna C, Koo S, Chandramouli GV, Yang HH, Hu Y, Kleiner DE, Rosenwald A, Schaefer CF, Ben-Sasson SA, Yang L, Powell J, Kane DW, Star RA, Aprelikova O, Bauer K, Vasselli JR, Maranchie JK, Kohn KW, Buetow KH, Linehan WM, Weinstein JN, Lee MP, Klausner RD, Barrett JC. Cancers as wounds that do not heal: differences and similarities between renal regeneration/repair and renal cell carcinoma. Cancer Res. 2006 Jul 15; 66(14):7216-24. PMID: 16849569.
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    160. Morin RD, Chang E, Petrescu A, Liao N, Griffith M, Chow W, Kirkpatrick R, Butterfield YS, Young AC, Stott J, Barber S, Babakaiff R, Dickson MC, Matsuo C, Wong D, Yang GS, Smailus DE, Wetherby KD, Kwong PN, Grimwood J, Brinkley CP, Brown-John M, Reddix-Dugue ND, Mayo M, Schmutz J, Beland J, Park M, Gibson S, Olson T, Bouffard GG, Tsai M, Featherstone R, Chand S, Siddiqui AS, Jang W, Lee E, Klein SL, Blakesley RW, Zeeberg BR, Narasimhan S, Weinstein JN, Pennacchio CP, Myers RM, Green ED, Wagner L, Gerhard DS, Marra MA, Jones SJ, Holt RA. Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling. Genome Res. 2006 Jun; 16(6):796-803. PMID: 16672307.
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    161. Pommier Y, Weinstein JN, Aladjem MI, Kohn KW. Chk2 molecular interaction map and rationale for Chk2 inhibitors. Clin Cancer Res. 2006 May 01; 12(9):2657-61. PMID: 16675556.
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    162. Ludwig JA, Szakács G, Martin SE, Chu BF, Cardarelli C, Sauna ZE, Caplen NJ, Fales HM, Ambudkar SV, Weinstein JN, Gottesman MM. Selective toxicity of NSC73306 in MDR1-positive cells as a new strategy to circumvent multidrug resistance in cancer. Cancer Res. 2006 May 01; 66(9):4808-15. PMID: 16651436.
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    163. Major SM, Nishizuka S, Morita D, Rowland R, Sunshine M, Shankavaram U, Washburn F, Asin D, Kouros-Mehr H, Kane D, Weinstein JN. AbMiner: a bioinformatic resource on available monoclonal antibodies and corresponding gene identifiers for genomic, proteomic, and immunologic studies. BMC Bioinformatics. 2006 Apr 06; 7:192. PMID: 16600027.
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    164. Bussey KJ, Chin K, Lababidi S, Reimers M, Reinhold WC, Kuo WL, Gwadry F, Kouros-Mehr H, Fridlyand J, Jain A, Collins C, Nishizuka S, Tonon G, Roschke A, Gehlhaus K, Kirsch I, Scudiero DA, Gray JW, Weinstein JN. Integrating data on DNA copy number with gene expression levels and drug sensitivities in the NCI-60 cell line panel. Mol Cancer Ther. 2006 Apr; 5(4):853-67. PMID: 16648555.
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    165. Blower PE, Cross KP, Eichler GS, Myatt GJ, Weinstein JN, Yang C. Comparison of methods for sequential screening of large compound sets. Comb Chem High Throughput Screen. 2006 Feb; 9(2):115-22. PMID: 16475969.
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    166. Staib F, Robles AI, Varticovski L, Wang XW, Zeeberg BR, Sirotin M, Zhurkin VB, Hofseth LJ, Hussain SP, Weinstein JN, Galle PR, Harris CC. The p53 tumor suppressor network is a key responder to microenvironmental components of chronic inflammatory stress. Cancer Res. 2005 Nov 15; 65(22):10255-64. PMID: 16288013.
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    167. Kohn KW, Aladjem MI, Weinstein JN, Pommier Y. Molecular interaction maps of bioregulatory networks: a general rubric for systems biology. Mol Biol Cell. 2006 Jan; 17(1):1-13. PMID: 16267266.
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    168. Ludwig JA, Weinstein JN. Biomarkers in cancer staging, prognosis and treatment selection. Nat Rev Cancer. 2005 Nov; 5(11):845-56. PMID: 16239904.
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    169. Ule J, Ule A, Spencer J, Williams A, Hu JS, Cline M, Wang H, Clark T, Fraser C, Ruggiu M, Zeeberg BR, Kane D, Weinstein JN, Blume J, Darnell RB. Nova regulates brain-specific splicing to shape the synapse. Nat Genet. 2005 Aug; 37(8):844-52. PMID: 16041372.
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    170. Zeeberg BR, Qin H, Narasimhan S, Sunshine M, Cao H, Kane DW, Reimers M, Stephens RM, Bryant D, Burt SK, Elnekave E, Hari DM, Wynn TA, Cunningham-Rundles C, Stewart DM, Nelson D, Weinstein JN. High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID). BMC Bioinformatics. 2005 Jul 05; 6:168. PMID: 15998470.
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    171. Reimers M, Weinstein JN. Quality assessment of microarrays: visualization of spatial artifacts and quantitation of regional biases. BMC Bioinformatics. 2005 Jul 01; 6:166. PMID: 15992406.
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    172. Petersen D, Chandramouli GV, Geoghegan J, Hilburn J, Paarlberg J, Kim CH, Munroe D, Gangi L, Han J, Puri R, Staudt L, Weinstein J, Barrett JC, Green J, Kawasaki ES. Three microarray platforms: an analysis of their concordance in profiling gene expression. BMC Genomics. 2005 May 05; 6:63. PMID: 15876355.
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    173. Lotze MT, Wang E, Marincola FM, Hanna N, Bugelski PJ, Burns CA, Coukos G, Damle N, Godfrey TE, Howell WM, Panelli MC, Perricone MA, Petricoin EF, Sauter G, Scheibenbogen C, Shivers SC, Taylor DL, Weinstein JN, Whiteside TL. Workshop on cancer biometrics: identifying biomarkers and surrogates of cancer in patients: a meeting held at the Masur Auditorium, National Institutes of Health. J Immunother. 2005 Mar-Apr; 28(2):79-119. PMID: 15725954.
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    174. Roschke AV, Lababidi S, Tonon G, Gehlhaus KS, Bussey K, Weinstein JN, Kirsch IR. Karyotypic "state" as a potential determinant for anticancer drug discovery. Proc Natl Acad Sci U S A. 2005 Feb 22; 102(8):2964-9. PMID: 15703300.
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    175. Fojo T, Farrell N, Ortuzar W, Tanimura H, Weinstein J, Myers TG. Identification of non-cross-resistant platinum compounds with novel cytotoxicity profiles using the NCI anticancer drug screen and clustered image map visualizations. Crit Rev Oncol Hematol. 2005 Jan; 53(1):25-34. PMID: 15607933.
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    176. Mulshine JL, Weinstein JN. Is the gene expression pattern of lung cancer detected by screening with spiral computed tomography different from that of symptom-detected lung cancer? Clin Cancer Res. 2004 Sep 15; 10(18 Pt 1):5973-4. PMID: 15447979.
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    177. Annereau JP, Szakács G, Tucker CJ, Arciello A, Cardarelli C, Collins J, Grissom S, Zeeberg BR, Reinhold W, Weinstein JN, Pommier Y, Paules RS, Gottesman MM. Analysis of ATP-binding cassette transporter expression in drug-selected cell lines by a microarray dedicated to multidrug resistance. Mol Pharmacol. 2004 Dec; 66(6):1397-405. PMID: 15342794.
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    178. Szakács G, Annereau JP, Lababidi S, Shankavaram U, Arciello A, Bussey KJ, Reinhold W, Guo Y, Kruh GD, Reimers M, Weinstein JN, Gottesman MM. Predicting drug sensitivity and resistance: profiling ABC transporter genes in cancer cells. Cancer Cell. 2004 Aug; 6(2):129-37. PMID: 15324696.
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    179. Zeeberg BR, Riss J, Kane DW, Bussey KJ, Uchio E, Linehan WM, Barrett JC, Weinstein JN. Mistaken identifiers: gene name errors can be introduced inadvertently when using Excel in bioinformatics. BMC Bioinformatics. 2004 Jun 23; 5:80. PMID: 15214961.
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    180. Huang Y, Anderle P, Bussey KJ, Barbacioru C, Shankavaram U, Dai Z, Reinhold WC, Papp A, Weinstein JN, Sadée W. Membrane transporters and channels: role of the transportome in cancer chemosensitivity and chemoresistance. Cancer Res. 2004 Jun 15; 64(12):4294-301. PMID: 15205344.
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    181. Kohn KW, Riss J, Aprelikova O, Weinstein JN, Pommier Y, Barrett JC. Properties of switch-like bioregulatory networks studied by simulation of the hypoxia response control system. Mol Biol Cell. 2004 Jul; 15(7):3042-52. PMID: 15107465.
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    182. Aladjem MI, Pasa S, Parodi S, Weinstein JN, Pommier Y, Kohn KW. Molecular interaction maps--a diagrammatic graphical language for bioregulatory networks. Sci STKE. 2004 Feb 24; 2004(222):pe8. PMID: 14997004.
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    183. Weinstein JN. Integromic analysis of the NCI-60 cancer cell lines. Breast Dis. 2004; 19:11-22. PMID: 15687693.
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    184. Roschke AV, Tonon G, Gehlhaus KS, McTyre N, Bussey KJ, Lababidi S, Scudiero DA, Weinstein JN, Kirsch IR. Karyotypic complexity of the NCI-60 drug-screening panel. Cancer Res. 2003 Dec 15; 63(24):8634-47. PMID: 14695175.
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    185. Lee JK, Bussey KJ, Gwadry FG, Reinhold W, Riddick G, Pelletier SL, Nishizuka S, Szakacs G, Annereau JP, Shankavaram U, Lababidi S, Smith LH, Gottesman MM, Weinstein JN. Comparing cDNA and oligonucleotide array data: concordance of gene expression across platforms for the NCI-60 cancer cells. Genome Biol. 2003; 4(12):R82. PMID: 14659019.
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    186. Nishizuka S, Charboneau L, Young L, Major S, Reinhold WC, Waltham M, Kouros-Mehr H, Bussey KJ, Lee JK, Espina V, Munson PJ, Petricoin E, Liotta LA, Weinstein JN. Proteomic profiling of the NCI-60 cancer cell lines using new high-density reverse-phase lysate microarrays. Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24):14229-34. PMID: 14623978.
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    187. Weinstein JN, Pommier Y. Transcriptomic analysis of the NCI-60 cancer cell lines. C R Biol. 2003 Oct-Nov; 326(10-11):909-20. PMID: 14744097.
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    188. Nishizuka S, Chen ST, Gwadry FG, Alexander J, Major SM, Scherf U, Reinhold WC, Waltham M, Charboneau L, Young L, Bussey KJ, Kim S, Lababidi S, Lee JK, Pittaluga S, Scudiero DA, Sausville EA, Munson PJ, Petricoin EF, Liotta LA, Hewitt SM, Raffeld M, Weinstein JN. Diagnostic markers that distinguish colon and ovarian adenocarcinomas: identification by genomic, proteomic, and tissue array profiling. Cancer Res. 2003 Sep 01; 63(17):5243-50. PMID: 14500354.
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    189. Yoshida A, Urasaki Y, Waltham M, Bergman AC, Pourquier P, Rothwell DG, Inuzuka M, Weinstein JN, Ueda T, Appella E, Hickson ID, Pommier Y. Human apurinic/apyrimidinic endonuclease (Ape1) and its N-terminal truncated form (AN34) are involved in DNA fragmentation during apoptosis. J Biol Chem. 2003 Sep 26; 278(39):37768-76. PMID: 12842873.
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    190. Daoud SS, Munson PJ, Reinhold W, Young L, Prabhu VV, Yu Q, LaRose J, Kohn KW, Weinstein JN, Pommier Y. Impact of p53 knockout and topotecan treatment on gene expression profiles in human colon carcinoma cells: a pharmacogenomic study. Cancer Res. 2003 Jun 01; 63(11):2782-93. PMID: 12782583.
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    191. Zeeberg BR, Feng W, Wang G, Wang MD, Fojo AT, Sunshine M, Narasimhan S, Kane DW, Reinhold WC, Lababidi S, Bussey KJ, Riss J, Barrett JC, Weinstein JN. GoMiner: a resource for biological interpretation of genomic and proteomic data. Genome Biol. 2003; 4(4):R28. PMID: 12702209.
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    192. Bussey KJ, Kane D, Sunshine M, Narasimhan S, Nishizuka S, Reinhold WC, Zeeberg B, Ajay W, Weinstein JN. MatchMiner: a tool for batch navigation among gene and gene product identifiers. Genome Biol. 2003; 4(4):R27. PMID: 12702208.
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    193. Reinhold WC, Kouros-Mehr H, Kohn KW, Maunakea AK, Lababidi S, Roschke A, Stover K, Alexander J, Pantazis P, Miller L, Liu E, Kirsch IR, Urasaki Y, Pommier Y, Weinstein JN. Apoptotic susceptibility of cancer cells selected for camptothecin resistance: gene expression profiling, functional analysis, and molecular interaction mapping. Cancer Res. 2003 Mar 01; 63(5):1000-11. PMID: 12615715.
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    194. Feng W, Wang G, Zeeberg BR, Guo K, Fojo AT, Kane DW, Reinhold WC, Lababidi S, Weinstein JN, Wang MD. Development of gene ontology tool for biological interpretation of genomic and proteomic data. AMIA Annu Symp Proc. 2003; 839. PMID: 14728344.
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    195. Weinstein JN. 'Omic' and hypothesis-driven research in the molecular pharmacology of cancer. Curr Opin Pharmacol. 2002 Aug; 2(4):361-5. PMID: 12127867.
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    196. Zhou Y, Gwadry FG, Reinhold WC, Miller LD, Smith LH, Scherf U, Liu ET, Kohn KW, Pommier Y, Weinstein JN. Transcriptional regulation of mitotic genes by camptothecin-induced DNA damage: microarray analysis of dose- and time-dependent effects. Cancer Res. 2002 Mar 15; 62(6):1688-95. PMID: 11912141.
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    197. Blower PE, Yang C, Fligner MA, Verducci JS, Yu L, Richman S, Weinstein JN. Pharmacogenomic analysis: correlating molecular substructure classes with microarray gene expression data. Pharmacogenomics J. 2002; 2(4):259-71. PMID: 12196914.
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    198. Weinstein JN, Scherf U, Lee JK, Nishizuka S, Gwadry F, Bussey AK, Kim S, Smith LH, Tanabe L, Richman S, Alexander J, Kouros-Mehr H, Maunakea A, Reinhold WC. The bioinformatics of microarray gene expression profiling. Cytometry. 2002 Jan 01; 47(1):46-9. PMID: 11774349.
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    199. Fan Y, Shi LM, Kohn KW, Pommier Y, Weinstein JN. Quantitative structure-antitumor activity relationships of camptothecin analogues: cluster analysis and genetic algorithm-based studies. J Med Chem. 2001 Sep 27; 44(20):3254-63. PMID: 11563924.
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    200. Staunton JE, Slonim DK, Coller HA, Tamayo P, Angelo MJ, Park J, Scherf U, Lee JK, Reinhold WO, Weinstein JN, Mesirov JP, Lander ES, Golub TR. Chemosensitivity prediction by transcriptional profiling. Proc Natl Acad Sci U S A. 2001 Sep 11; 98(19):10787-92. PMID: 11553813.
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    201. Viswanadhan VN, Mueller GA, Basak SC, Weinstein JN. Comparison of a neural net-based QSAR algorithm (PCANN) with Hologram- and multiple linear regression-based QSAR approaches: application to 1,4-dihydropyridine-based calcium channel antagonists. J Chem Inf Comput Sci. 2001 May-Jun; 41(3):505-11. PMID: 11410024.
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    202. Roy L, Coullin P, Vitrat N, Hellio R, Debili N, Weinstein J, Bernheim A, Vainchenker W. Asymmetrical segregation of chromosomes with a normal metaphase/anaphase checkpoint in polyploid megakaryocytes. Blood. 2001 Apr 15; 97(8):2238-47. PMID: 11290584.
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    203. Lurie JD, Weinstein JN. Shared decision-making and the orthopaedic workforce. Clin Orthop Relat Res. 2001 Apr; (385):68-75. PMID: 11302328.
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    204. Buckner JC, Moynihan TJ. The DNA-repair gene MGMT and the clinical response of gliomas to alkylating agents. N Engl J Med. 2001 Mar 01; 344(9):686; author reply 687-8. PMID: 11229337.
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    205. Deyo RA, Weinstein JN. Low back pain. N Engl J Med. 2001 Feb 01; 344(5):363-70. PMID: 11172169.
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    206. Phelan EA, Deyo RA, Cherkin DC, Weinstein JN, Ciol MA, Kreuter W, Howe JF. Helping patients decide about back surgery: a randomized trial of an interactive video program. Spine (Phila Pa 1976). 2001 Jan 15; 26(2):206-11;discussion 212. PMID: 11154542.
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    207. Fine KD, Ogunji F, Saloum Y, Beharry S, Crippin J, Weinstein J. Celiac sprue: another autoimmune syndrome associated with hepatitis C. Am J Gastroenterol. 2001 Jan; 96(1):138-45. PMID: 11197243.
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    208. Weinstein JN. Searching for pharmacogenomic markers: the synergy between omic and hypothesis-driven research. Dis Markers. 2001; 17(2):77-88. PMID: 11673654.
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    209. Weinstein JN, Deyo RA. Clinical research: issues in data collection. Spine (Phila Pa 1976). 2000 Dec 15; 25(24):3104-9. PMID: 11124725.
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    210. Weinstein JN. Pharmacogenomics--teaching old drugs new tricks. N Engl J Med. 2000 Nov 09; 343(19):1408-9. PMID: 11070107.
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    211. Fried MW, Shiffman M, Sterling RK, Weinstein J, Crippin J, Garcia G, Wright TL, Conjeevaram H, Reddy KR, Peter J, Cotsonis GA, Nolte FS. A multicenter, randomized trial of daily high-dose interferon-alfa 2b for the treatment of chronic hepatitis c: pretreatment stratification by viral burden and genotype. Am J Gastroenterol. 2000 Nov; 95(11):3225-9. PMID: 11095346.
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    212. Wu H, Lan Z, Li W, Wu S, Weinstein J, Sakamoto KM, Dai W. p55CDC/hCDC20 is associated with BUBR1 and may be a downstream target of the spindle checkpoint kinase. Oncogene. 2000 Sep 21; 19(40):4557-62. PMID: 11030144.
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    213. Fanuele JC, Birkmeyer NJ, Abdu WA, Tosteson TD, Weinstein JN. The impact of spinal problems on the health status of patients: have we underestimated the effect? Spine (Phila Pa 1976). 2000 Jun 15; 25(12):1509-14. PMID: 10851099.
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    214. Kuntz KM, Snider RK, Weinstein JN, Pope MH, Katz JN. Cost-effectiveness of fusion with and without instrumentation for patients with degenerative spondylolisthesis and spinal stenosis. Spine (Phila Pa 1976). 2000 May 01; 25(9):1132-9. PMID: 10788859.
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    215. Lisziewicz J, Zeng G, Gratas C, Weinstein JN, Lori F. Combination gene therapy: synergistic inhibition of human immunodeficiency virus Tat and Rev functions by a single RNA molecule. Hum Gene Ther. 2000 Apr 10; 11(6):807-15. PMID: 10779158.
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    216. Ross DT, Scherf U, Eisen MB, Perou CM, Rees C, Spellman P, Iyer V, Jeffrey SS, Van de Rijn M, Waltham M, Pergamenschikov A, Lee JC, Lashkari D, Shalon D, Myers TG, Weinstein JN, Botstein D, Brown PO. Systematic variation in gene expression patterns in human cancer cell lines. Nat Genet. 2000 Mar; 24(3):227-35. PMID: 10700174.
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    217. Shi LM, Fan Y, Lee JK, Waltham M, Andrews DT, Scherf U, Paull KD, Weinstein JN. Mining and visualizing large anticancer drug discovery databases. J Chem Inf Comput Sci. 2000 Mar-Apr; 40(2):367-79. PMID: 10761142.
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    218. Weinstein JN, Buolamwini JK. Molecular targets in cancer drug discovery: cell-based profiling. Curr Pharm Des. 2000 Mar; 6(4):473-83. PMID: 10788592.
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    219. Scherf U, Ross DT, Waltham M, Smith LH, Lee JK, Tanabe L, Kohn KW, Reinhold WC, Myers TG, Andrews DT, Scudiero DA, Eisen MB, Sausville EA, Pommier Y, Botstein D, Brown PO, Weinstein JN. A gene expression database for the molecular pharmacology of cancer. Nat Genet. 2000 Mar; 24(3):236-44. PMID: 10700175.
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    220. Rindflesch TC, Tanabe L, Weinstein JN, Hunter L. EDGAR: extraction of drugs, genes and relations from the biomedical literature. Pac Symp Biocomput. 2000; 517-28. PMID: 10902199.
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    221. van Osdol WW, Myers TG, Weinstein JN. Neural network techniques for informatics of cancer drug discovery. Methods Enzymol. 2000; 321:369-95. PMID: 10909067.
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    222. Weinstein JN. The missing piece: embracing shared decision making to reform health care. Spine (Phila Pa 1976). 2000 Jan; 25(1):1-4. PMID: 10647152.
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    223. Tanabe L, Scherf U, Smith LH, Lee JK, Hunter L, Weinstein JN. MedMiner: an Internet text-mining tool for biomedical information, with application to gene expression profiling. Biotechniques. 1999 Dec; 27(6):1210-4, 1216-7. PMID: 10631500.
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    224. Katz JN, Stucki G, Lipson SJ, Fossel AH, Grobler LJ, Weinstein JN. Predictors of surgical outcome in degenerative lumbar spinal stenosis. Spine (Phila Pa 1976). 1999 Nov 01; 24(21):2229-33. PMID: 10562989.
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    225. Afonso A, Weinstein J, Kelly J, Wolin R, Rosenblum SB, Connolly M, Guzi T, James L, Carr D, Patton R, Bishop WR, Kirshmeier P, Liu M, Heimark L, Chen KJ, Nomeir AA. Analogues of 1-(3,10-dibromo-8-chloro-6,11-dihydro-5H-benzo-[5,6]-cyclohepta [1,2-b]pyridin-11-yl)piperidine as inhibitors of farnesyl protein transferase. Bioorg Med Chem. 1999 Sep; 7(9):1845-55. PMID: 10530932.
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    226. Brien P, Brien M. Clinical crossroads: a 45-year-old man with low back pain. JAMA. 1999 Mar 10; 281(10):893; author reply 895. PMID: 10078473.
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    227. Carrier F, Georgel PT, Pourquier P, Blake M, Kontny HU, Antinore MJ, Gariboldi M, Myers TG, Weinstein JN, Pommier Y, Fornace AJ. Gadd45, a p53-responsive stress protein, modifies DNA accessibility on damaged chromatin. Mol Cell Biol. 1999 Mar; 19(3):1673-85. PMID: 10022855.
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    228. Fornace AJ, Amundson SA, Bittner M, Myers TG, Meltzer P, Weinsten JN, Trent J. The complexity of radiation stress responses: analysis by informatics and functional genomics approaches. Gene Expr. 1999; 7(4-6):387-400. PMID: 10440239.
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    229. Weinstein JN. Fishing expeditions. Science. 1998 Oct 23; 282(5389):628-9. PMID: 9841413.
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    230. Heckman JD, Lee PP, Jackson CA, Relles D, Weinstein JN, Gebhardt MC, Simon MA, Callaghan JJ, D'Ambrosia RD. Orthopaedic workforce in the next millennium. J Bone Joint Surg Am. 1998 Oct; 80(10):1533-51. PMID: 9801223.
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    231. Lin M, Mendoza M, Kane L, Weinstein J, Sakamoto KM. Analysis of cell death in myeloid cells inducibly expressing the cell cycle protein p55Cdc. Exp Hematol. 1998 Sep; 26(10):1000-6. PMID: 9728936.
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    232. Fan Y, Weinstein JN, Kohn KW, Shi LM, Pommier Y. Molecular modeling studies of the DNA-topoisomerase I ternary cleavable complex with camptothecin. J Med Chem. 1998 Jun 18; 41(13):2216-26. PMID: 9632354.
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    233. Kallio M, Weinstein J, Daum JR, Burke DJ, Gorbsky GJ. Mammalian p55CDC mediates association of the spindle checkpoint protein Mad2 with the cyclosome/anaphase-promoting complex, and is involved in regulating anaphase onset and late mitotic events. J Cell Biol. 1998 Jun 15; 141(6):1393-406. PMID: 9628895.
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    234. Weinstein J, Karim J, Geschwind DH, Nelson SF, Krumm J, Sakamoto KM. Genomic organization, 5' flanking enhancer region, and chromosomal assignment of the cell cycle gene, p55Cdc. Mol Genet Metab. 1998 May; 64(1):52-7. PMID: 9682218.
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    235. Gordon SL, Weinstein JN. A review of basic science issues in low back pain. Phys Med Rehabil Clin N Am. 1998 May; 9(2):323-42, vii. PMID: 9894121.
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    236. Shi LM, Fan Y, Myers TG, O'Connor PM, Paull KD, Friend SH, Weinstein JN. Mining the NCI anticancer drug discovery databases: genetic function approximation for the QSAR study of anticancer ellipticine analogues. J Chem Inf Comput Sci. 1998 Mar-Apr; 38(2):189-99. PMID: 9538518.
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    237. Shi LM, Myers TG, Fan Y, O'Connor PM, Paull KD, Friend SH, Weinstein JN. Mining the National Cancer Institute Anticancer Drug Discovery Database: cluster analysis of ellipticine analogs with p53-inverse and central nervous system-selective patterns of activity. Mol Pharmacol. 1998 Feb; 53(2):241-51. PMID: 9463482.
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    238. Weinstein J. Cell cycle-regulated expression, phosphorylation, and degradation of p55Cdc. A mammalian homolog of CDC20/Fizzy/slp1. J Biol Chem. 1997 Nov 07; 272(45):28501-11. PMID: 9353311.
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    239. Wosikowski K, Schuurhuis D, Johnson K, Paull KD, Myers TG, Weinstein JN, Bates SE. Identification of epidermal growth factor receptor and c-erbB2 pathway inhibitors by correlation with gene expression patterns. J Natl Cancer Inst. 1997 Oct 15; 89(20):1505-15. PMID: 9337347.
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    240. O'Connor PM, Jackman J, Bae I, Myers TG, Fan S, Mutoh M, Scudiero DA, Monks A, Sausville EA, Weinstein JN, Friend S, Fornace AJ, Kohn KW. Characterization of the p53 tumor suppressor pathway in cell lines of the National Cancer Institute anticancer drug screen and correlations with the growth-inhibitory potency of 123 anticancer agents. Cancer Res. 1997 Oct 01; 57(19):4285-300. PMID: 9331090.
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    241. Weinstein J, Isaacs S, Shore D, Blevins LS. Diagnosis & management of pituitary tumors. Compr Ther. 1997 Sep; 23(9):594-604. PMID: 9285160.
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    242. Hart RA, Boriani S, Biagini R, Currier B, Weinstein JN. A system for surgical staging and management of spine tumors. A clinical outcome study of giant cell tumors of the spine. Spine (Phila Pa 1976). 1997 Aug 01; 22(15):1773-82; discussion 1783. PMID: 9259790.
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    243. Katz JN, Lipson SJ, Lew RA, Grobler LJ, Weinstein JN, Brick GW, Fossel AH, Liang MH. Lumbar laminectomy alone or with instrumented or noninstrumented arthrodesis in degenerative lumbar spinal stenosis. Patient selection, costs, and surgical outcomes. Spine (Phila Pa 1976). 1997 May 15; 22(10):1123-31. PMID: 9160471.
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    244. Boriani S, Weinstein JN, Biagini R. Primary bone tumors of the spine. Terminology and surgical staging. Spine (Phila Pa 1976). 1997 May 01; 22(9):1036-44. PMID: 9152458.
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    245. Li G, Waltham M, Anderson NL, Unsworth E, Treston A, Weinstein JN. Rapid mass spectrometric identification of proteins from two-dimensional polyacrylamide gels after in gel proteolytic digestion. Electrophoresis. 1997 Mar-Apr; 18(3-4):391-402. PMID: 9150917.
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    246. Myers TG, Anderson NL, Waltham M, Li G, Buolamwini JK, Scudiero DA, Paull KD, Sausville EA, Weinstein JN. A protein expression database for the molecular pharmacology of cancer. Electrophoresis. 1997 Mar-Apr; 18(3-4):647-53. PMID: 9150955.
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    247. Burke HB, Goodman PH, Rosen DB, Henson DE, Weinstein JN, Harrell FE, Marks JR, Winchester DP, Bostwick DG. Artificial neural networks improve the accuracy of cancer survival prediction. Cancer. 1997 Feb 15; 79(4):857-62. PMID: 9024725.
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    248. Weinstein JN, Myers TG, O'Connor PM, Friend SH, Fornace AJ, Kohn KW, Fojo T, Bates SE, Rubinstein LV, Anderson NL, Buolamwini JK, van Osdol WW, Monks AP, Scudiero DA, Sausville EA, Zaharevitz DW, Bunow B, Viswanadhan VN, Johnson GS, Wittes RE, Paull KD. An information-intensive approach to the molecular pharmacology of cancer. Science. 1997 Jan 17; 275(5298):343-9. PMID: 8994024.
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    249. Buolamwini JK, Raghavan K, Fesen MR, Pommier Y, Kohn KW, Weinstein JN. Application of the electrotopological state index to QSAR analysis of flavone derivatives as HIV-1 integrase inhibitors. Pharm Res. 1996 Dec; 13(12):1892-5. PMID: 8987091.
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    250. Weinstein J, Sundaram S, Wang X, Delgado D, Basu R, Stanley P. A point mutation causes mistargeting of Golgi GlcNAc-TV in the Lec4A Chinese hamster ovary glycosylation mutant. J Biol Chem. 1996 Nov 01; 271(44):27462-9. PMID: 8910328.
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    251. Kong WZ, Goel VK, Gilbertson LG, Weinstein JN. Effects of muscle dysfunction on lumbar spine mechanics. A finite element study based on a two motion segments model. Spine (Phila Pa 1976). 1996 Oct 01; 21(19):2197-206; discussion 2206-7. PMID: 8902963.
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    252. Kao CT, Lin M, O'Shea-Greenfield A, Weinstein J, Sakamoto KM. Over-expression of p55Cdc inhibits granulocyte differentiation and accelerates apoptosis in myeloid cells. Oncogene. 1996 Sep 19; 13(6):1221-9. PMID: 8808696.
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    253. Boriani S, Chevalley F, Weinstein JN, Biagini R, Campanacci L, De Iure F, Piccill P. Chordoma of the spine above the sacrum. Treatment and outcome in 21 cases. Spine (Phila Pa 1976). 1996 Jul 01; 21(13):1569-77. PMID: 8817786.
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    254. Li F, Wilkins PP, Crawley S, Weinstein J, Cummings RD, McEver RP. Post-translational modifications of recombinant P-selectin glycoprotein ligand-1 required for binding to P- and E-selectin. J Biol Chem. 1996 Feb 09; 271(6):3255-64. PMID: 8621728.
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    255. Viswanadhan VN, Reddy MR, Wlodawer A, Varney MD, Weinstein JN. An approach to rapid estimation of relative binding affinities of enzyme inhibitors: application to peptidomimetic inhibitors of the human immunodeficiency virus type 1 protease. J Med Chem. 1996 Feb 02; 39(3):705-12. PMID: 8576913.
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    256. Bessette L, Liang MH, Lew RA, Weinstein JN. Classics in Spine. Surgery literature revisited. Spine (Phila Pa 1976). 1996 Feb 01; 21(3):259-63. PMID: 8742199.
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    257. Magnusson ML, Aleksiev A, Wilder DG, Pope MH, Spratt K, Lee SH, Goel VK, Weinstein JN. European Spine Society--the AcroMed Prize for Spinal Research 1995. Unexpected load and asymmetric posture as etiologic factors in low back pain. Eur Spine J. 1996; 5(1):23-35. PMID: 8689414.
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    258. Casciari JJ, Sato H, Durum SK, Fiege J, Weinstein JN. Reference databases of cytokine structure and function. Cancer Chemother Biol Response Modif. 1996; 16:315-46. PMID: 8639389.
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    259. Dearing MP, Englee-Miller MJ, Kratzke RA, Kramer BS, Chu E, Weinstein J, Anderson M, Venzon D, Mulshine JL, Gazdar AF. Dipyridamole mediated enhanced antiproliferative activity of 10-ethyl-10-deazaaminopterin (10-EDAM) against human lung cancer cell lines. J Cell Biochem Suppl. 1996; 24:165-72. PMID: 8806099.
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    260. Smith TP, Gray L, Weinstein JN, Richardson WJ, Payne CS. Preoperative transarterial embolization of spinal column neoplasms. J Vasc Interv Radiol. 1995 Nov-Dec; 6(6):863-9. PMID: 8850661.
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    261. Saga T, Neumann RD, Heya T, Sato J, Kinuya S, Le N, Paik CH, Weinstein JN. Targeting cancer micrometastases with monoclonal antibodies: a binding-site barrier. Proc Natl Acad Sci U S A. 1995 Sep 12; 92(19):8999-9003. PMID: 7568060.
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    262. Chokekijchai S, Shirasaka T, Weinstein JN, Mitsuya H. In vitro anti-HIV-1 activity of HIV protease inhibitor KNI-272 in resting and activated cells: implications for its combined use with AZT or ddI. Antiviral Res. 1995 Sep; 28(1):25-38. PMID: 8585758.
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    263. Alvarez M, Paull K, Monks A, Hose C, Lee JS, Weinstein J, Grever M, Bates S, Fojo T. Generation of a drug resistance profile by quantitation of mdr-1/P-glycoprotein in the cell lines of the National Cancer Institute Anticancer Drug Screen. J Clin Invest. 1995 May; 95(5):2205-14. PMID: 7738186.
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    264. Mazumder A, Raghavan K, Weinstein J, Kohn KW, Pommier Y. Inhibition of human immunodeficiency virus type-1 integrase by curcumin. Biochem Pharmacol. 1995 Apr 18; 49(8):1165-70. PMID: 7748198.
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    265. Raghavan K, Buolamwini JK, Fesen MR, Pommier Y, Kohn KW, Weinstein JN. Three-dimensional quantitative structure-activity relationship (QSAR) of HIV integrase inhibitors: a comparative molecular field analysis (CoMFA) study. J Med Chem. 1995 Mar 17; 38(6):890-7. PMID: 7699704.
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    266. Bates SE, Fojo AT, Weinstein JN, Myers TG, Alvarez M, Pauli KD, Chabner BA. Molecular targets in the National Cancer Institute drug screen. J Cancer Res Clin Oncol. 1995; 121(9-10):495-500. PMID: 7559726.
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    267. Han JS, Goel VK, Ahn JY, Winterbottom J, McGowan D, Weinstein J, Cook T. Loads in the spinal structures during lifting: development of a three-dimensional comprehensive biomechanical model. Eur Spine J. 1995; 4(3):153-68. PMID: 7552650.
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    268. Casciari JJ, Hollingshead MG, Alley MC, Mayo JG, Malspeis L, Miyauchi S, Grever MR, Weinstein JN. Growth and chemotherapeutic response of cells in a hollow-fiber in vitro solid tumor model. J Natl Cancer Inst. 1994 Dec 21; 86(24):1846-52. PMID: 7990159.
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    269. van Osdol WW, Myers TG, Paull KD, Kohn KW, Weinstein JN. Use of the Kohonen self-organizing map to study the mechanisms of action of chemotherapeutic agents. J Natl Cancer Inst. 1994 Dec 21; 86(24):1853-9. PMID: 7990160.
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    270. Chung KN, Paik TH, Roberts S, Kim CH, Kirassova M, Weinstein JN, Trepel JB, Elwood PC. Site-directed mutagenesis of tryptophan residues to conserved hydrophobic residues inhibits the processing of human KB cell folate receptor. Arch Biochem Biophys. 1994 Dec; 315(2):407-14. PMID: 7986085.
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    271. Lori F, Malykh A, Cara A, Sun D, Weinstein JN, Lisziewicz J, Gallo RC. Hydroxyurea as an inhibitor of human immunodeficiency virus-type 1 replication. Science. 1994 Nov 04; 266(5186):801-5. PMID: 7973634.
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    272. Hendrix CW, Flexner C, Szebeni J, Kuwahara S, Pennypacker S, Weinstein JN, Lietman PS. Effect of dipyridamole on zidovudine pharmacokinetics and short-term tolerance in asymptomatic human immunodeficiency virus-infected subjects. Antimicrob Agents Chemother. 1994 May; 38(5):1036-40. PMID: 8067734.
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    273. Weinstein J, Jacobsen FW, Hsu-Chen J, Wu T, Baum LG. A novel mammalian protein, p55CDC, present in dividing cells is associated with protein kinase activity and has homology to the Saccharomyces cerevisiae cell division cycle proteins Cdc20 and Cdc4. Mol Cell Biol. 1994 May; 14(5):3350-63. PMID: 7513050.
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    274. Saga T, Weinstein JN, Jeong JM, Heya T, Lee JT, Le N, Paik CH, Sung C, Neumann RD. Two-step targeting of experimental lung metastases with biotinylated antibody and radiolabeled streptavidin. Cancer Res. 1994 Apr 15; 54(8):2160-5. PMID: 8174123.
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    275. Sung C, van Osdol WW, Saga T, Neumann RD, Dedrick RL, Weinstein JN. Streptavidin distribution in metastatic tumors pretargeted with a biotinylated monoclonal antibody: theoretical and experimental pharmacokinetics. Cancer Res. 1994 Apr 15; 54(8):2166-75. PMID: 8174124.
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    276. Koutsoukos AD, Rubinstein LV, Faraggi D, Simon RM, Kalyandrug S, Weinstein JN, Kohn KW, Paull KD. Discrimination techniques applied to the NCI in vitro anti-tumour drug screen: predicting biochemical mechanism of action. Stat Med. 1994 Mar 15-Apr 15; 13(5-7):719-30. PMID: 8023045.
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    277. Lim TH, Goel VK, Winterbottom JM, Kessler B, Ahn JY, Gwon JK, Park JB, Weinstein JN. A comparison of stress-induced porosity due to conventional and a modified spinal fixation device. J Spinal Disord. 1994 Feb; 7(1):1-11. PMID: 8186583.
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    278. Kim JK, Park JB, Weinstein JN, Marsh JL, Kim YS, Loening SA. Effect of shock wave treatment on femoral prosthesis and cement removal. Biomed Mater Eng. 1994; 4(6):451-61. PMID: 7833788.
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    279. Weinstein JN, Myers T, Buolamwini J, Raghavan K, van Osdol W, Licht J, Viswanadhan VN, Kohn KW, Rubinstein LV, Koutsoukos AD, et al. Predictive statistics and artificial intelligence in the U.S. National Cancer Institute's Drug Discovery Program for Cancer and AIDS. Stem Cells. 1994 Jan; 12(1):13-22. PMID: 8142917.
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    280. van Osdol WW, Sung C, Dedrick RL, Weinstein JN. A distributed pharmacokinetic model of two-step imaging and treatment protocols: application to streptavidin-conjugated monoclonal antibodies and radiolabeled biotin. J Nucl Med. 1993 Sep; 34(9):1552-64. PMID: 8355076.
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    281. Shoreibah M, Perng GS, Adler B, Weinstein J, Basu R, Cupples R, Wen D, Browne JK, Buckhaults P, Fregien N, Pierce M. Isolation, characterization, and expression of a cDNA encoding N-acetylglucosaminyltransferase V. J Biol Chem. 1993 Jul 25; 268(21):15381-5. PMID: 8340368.
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    282. Juweid M, Sato J, Paik C, Onay-Basaran S, Weinstein JN, Neumann RD. A simple method for affinity purification of radiolabeled monoclonal antibodies. Nucl Med Biol. 1993 Apr; 20(3):311-5. PMID: 8485490.
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    283. Betageri GV, Black CD, Szebeni J, Wahl LM, Weinstein JN. Fc-receptor-mediated targeting of antibody-bearing liposomes containing dideoxycytidine triphosphate to human monocyte/macrophages. J Pharm Pharmacol. 1993 Jan; 45(1):48-53. PMID: 8094446.
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    284. Weinstein JN, Kohn KW, Grever MR, Viswanadhan VN, Rubinstein LV, Monks AP, Scudiero DA, Welch L, Koutsoukos AD, Chiausa AJ, et al. Neural computing in cancer drug development: predicting mechanism of action. Science. 1992 Oct 16; 258(5081):447-51. PMID: 1411538.
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    285. Juweid M, Neumann R, Paik C, Perez-Bacete MJ, Sato J, van Osdol W, Weinstein JN. Micropharmacology of monoclonal antibodies in solid tumors: direct experimental evidence for a binding site barrier. Cancer Res. 1992 Oct 01; 52(19):5144-53. PMID: 1327501.
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    286. Matteo RS, Ornstein E, Schwartz AE, Young WL, Weinstein J, Cain CF. Effects of hypocarbia on the pharmacodynamics of sufentanil in humans. Anesth Analg. 1992 Aug; 75(2):186-92. PMID: 1385931.
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    287. Kageyama S, Weinstein JN, Shirasaka T, Kempf DJ, Norbeck DW, Plattner JJ, Erickson J, Mitsuya H. In vitro inhibition of human immunodeficiency virus (HIV) type 1 replication by C2 symmetry-based HIV protease inhibitors as single agents or in combinations. Antimicrob Agents Chemother. 1992 May; 36(5):926-33. PMID: 1510415.
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    288. Weinstein JN, van Osdol W. Early intervention in cancer using monoclonal antibodies and other biological ligands: micropharmacology and the "binding site barrier". Cancer Res. 1992 May 01; 52(9 Suppl):2747s-2751s. PMID: 1563006.
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    289. Weinstein JN, van Osdol W. The macroscopic and microscopic pharmacology of monoclonal antibodies. Int J Immunopharmacol. 1992 Apr; 14(3):457-63. PMID: 1618598.
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    290. Hui TE, Fisher DR, Press OW, Eary JF, Weinstein JN, Badger CC, Bernstein ID. Localized beta dosimetry of 131I-labeled antibodies in follicular lymphoma. Med Phys. 1992 Jan-Feb; 19(1):97-104. PMID: 1620064.
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    291. Nishi T, Weinstein J, Gillespie WM, Paulson JC. Complete primary structure of porcine tenascin. Detection of tenascin transcripts in adult submaxillary glands. Eur J Biochem. 1991 Dec 05; 202(2):643-8. PMID: 1722152.
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    292. Viswanadhan VN, Denckla B, Weinstein JN. New joint prediction algorithm (Q7-JASEP) improves the prediction of protein secondary structure. Biochemistry. 1991 Nov 19; 30(46):11164-72. PMID: 1932036.
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    293. Reddy MR, Viswanadhan VN, Weinstein JN. Relative differences in the binding free energies of human immunodeficiency virus 1 protease inhibitors: a thermodynamic cycle-perturbation approach. Proc Natl Acad Sci U S A. 1991 Nov 15; 88(22):10287-91. PMID: 1946447.
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    294. Szebeni J, Dieffenbach C, Wahl SM, Venkateshan CN, Yeh A, Popovic M, Gartner S, Wahl LM, Peterfy M, Friedman RM, et al. Induction of alpha interferon by human immunodeficiency virus type 1 in human monocyte-macrophage cultures. J Virol. 1991 Nov; 65(11):6362-4. PMID: 1920639.
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    295. van Osdol W, Fujimori K, Weinstein JN. An analysis of monoclonal antibody distribution in microscopic tumor nodules: consequences of a "binding site barrier". Cancer Res. 1991 Sep 15; 51(18):4776-84. PMID: 1893370.
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    296. Fujimori K, Fisher DR, Weinstein JN. Integrated microscopic-macroscopic pharmacology of monoclonal antibody radioconjugates: the radiation dose distribution. Cancer Res. 1991 Sep 15; 51(18):4821-7. PMID: 1893374.
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    297. Patel SS, Szebeni J, Wahl LM, Weinstein JN. Differential inhibition of 2'-deoxycytidine salvage as a possible mechanism for potentiation of the anti-human immunodeficiency virus activity of 2',3'-dideoxycytidine by dipyridamole. Antimicrob Agents Chemother. 1991 Jun; 35(6):1250-3. PMID: 1656858.
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    298. Szebeni J, Weinstein JN. Dipyridamole binding to proteins in human plasma and tissue culture media. J Lab Clin Med. 1991 Jun; 117(6):485-92. PMID: 2045716.
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    299. Goel VK, Lim TH, Gwon J, Chen JY, Winterbottom JM, Park JB, Weinstein JN, Ahn JY. Effects of rigidity of an internal fixation device. A comprehensive biomechanical investigation. Spine (Phila Pa 1976). 1991 Mar; 16(3 Suppl):S155-61. PMID: 2028332.
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    300. Mulshine JL, Carrasquillo JA, Weinstein JN, Keenan AM, Reynolds JC, Herdt J, Bunn PA, Sausville E, Eddy J, Cotelingam JD, et al. Direct intralymphatic injection of radiolabeled 111In-T101 in patients with cutaneous T-cell lymphoma. Cancer Res. 1991 Jan 15; 51(2):688-95. PMID: 1985786.
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    301. Szebeni J, Patel SS, Hung K, Wahl LM, Weinstein JN. Effects of thymidine and uridine on the phosphorylation of 3'-azido-3'-deoxythymidine (zidovudine) in human mononuclear cells. Antimicrob Agents Chemother. 1991 Jan; 35(1):198-200. PMID: 2014977.
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    302. Ashorn P, Moss B, Weinstein JN, Chaudhary VK, FitzGerald DJ, Pastan I, Berger EA. Elimination of infectious human immunodeficiency virus from human T-cell cultures by synergistic action of CD4-Pseudomonas exotoxin and reverse transcriptase inhibitors. Proc Natl Acad Sci U S A. 1990 Nov; 87(22):8889-93. PMID: 1701055.
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    303. Betageri GV, Szebeni J, Hung K, Patel SS, Wahl LM, Corcoran M, Weinstein JN. Effect of dipyridamole on transport and phosphorylation of thymidine and 3'-azido-3'-deoxythymidine in human monocyte/macrophages. Biochem Pharmacol. 1990 Aug 15; 40(4):867-70. PMID: 2386551.
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    304. Walsh TR, Weinstein JN, Spratt KF, Lehmann TR, Aprill C, Sayre H. Lumbar discography in normal subjects. A controlled, prospective study. J Bone Joint Surg Am. 1990 Aug; 72(7):1081-8. PMID: 2384508.
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    305. Viswanadhan VN, Ghose AK, Weinstein JN. Mapping the binding site of the nucleoside transporter protein: a 3D-OSAR study. Biochim Biophys Acta. 1990 Jul 06; 1039(3):356-66. PMID: 2378893.
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    306. Fujimori K, Covell DG, Fletcher JE, Weinstein JN. A modeling analysis of monoclonal antibody percolation through tumors: a binding-site barrier. J Nucl Med. 1990 Jul; 31(7):1191-8. PMID: 2362198.
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    307. Szebeni J, Wahl SM, Betageri GV, Wahl LM, Gartner S, Popovic M, Parker RJ, Black CD, Weinstein JN. Inhibition of HIV-1 in monocyte/macrophage cultures by 2',3'-dideoxycytidine-5'-triphosphate, free and in liposomes. AIDS Res Hum Retroviruses. 1990 May; 6(5):691-702. PMID: 2163269.
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    308. Mackiewicz A, Ganapathi MK, Schultz D, Brabenec A, Weinstein J, Kelley MF, Kushner I. Transforming growth factor beta 1 regulates production of acute-phase proteins. Proc Natl Acad Sci U S A. 1990 Feb; 87(4):1491-5. PMID: 1689487.
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    309. Viswanadhan VN, Weinstein JN, Elwood PC. Secondary structure of the human membrane-associated folate binding protein using a joint prediction approach. J Biomol Struct Dyn. 1990 Feb; 7(4):985-1001. PMID: 2310527.
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    310. Weinstein JN, Bunow B, Weislow OS, Schinazi RF, Wahl SM, Wahl LM, Szebeni J. Synergistic drug combinations in AIDS therapy. Dipyridamole/3'-azido-3'-deoxythymidine in particular and principles of analysis in general. Ann N Y Acad Sci. 1990; 616:367-84. PMID: 2078029.
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    311. Weinstein JN. Antibody lymphoscintigraphy. Cancer Treat Res. 1990; 51:365-85. PMID: 1977456.
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    312. Fujimori K, Covell DG, Fletcher JE, Weinstein JN. Modeling analysis of the global and microscopic distribution of immunoglobulin G, F(ab')2, and Fab in tumors. Cancer Res. 1989 Oct 15; 49(20):5656-63. PMID: 2790783.
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    313. Paulson JC, Weinstein J, Schauer A. Tissue-specific expression of sialyltransferases. J Biol Chem. 1989 Jul 05; 264(19):10931-4. PMID: 2738054.
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    314. McLain RF, Weinstein JN. Solitary plasmacytomas of the spine: a review of 84 cases. J Spinal Disord. 1989 Jun; 2(2):69-74. PMID: 2520065.
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    315. Szebeni J, Wahl SM, Popovic M, Wahl LM, Gartner S, Fine RL, Skaleric U, Friedmann RM, Weinstein JN. Dipyridamole potentiates the inhibition by 3'-azido-3'-deoxythymidine and other dideoxynucleosides of human immunodeficiency virus replication in monocyte-macrophages. Proc Natl Acad Sci U S A. 1989 May; 86(10):3842-6. PMID: 2542948.
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    316. Horowitch A, Peek RD, Thomas JC, Widell EH, DiMartino PP, Spencer CW, Weinstein J, Wiltse LL. The Wiltse pedicle screw fixation system. Early clinical results. Spine (Phila Pa 1976). 1989 Apr; 14(4):461-7. PMID: 2718052.
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    317. Weinstein J, Claverie W, Gibson S. The pain of discography. Spine (Phila Pa 1976). 1988 Dec; 13(12):1344-8. PMID: 2463678.
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    318. Taatjes DJ, Roth J, Weinstein J, Paulson JC. Post-Golgi apparatus localization and regional expression of rat intestinal sialyltransferase detected by immunoelectron microscopy with polypeptide epitope-purified antibody. J Biol Chem. 1988 May 05; 263(13):6302-9. PMID: 2452161.
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    319. Young WL, Solomon RA, Prohovnik I, Ornstein E, Weinstein J, Stein BM. 133Xe blood flow monitoring during arteriovenous malformation resection: a case of intraoperative hyperperfusion with subsequent brain swelling. Neurosurgery. 1988 Apr; 22(4):765-9. PMID: 3374791.
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    320. Goel VK, Voo LM, Weinstein JN, Liu YK, Okuma T, Njus GO. Response of the ligamentous lumbar spine to cyclic bending loads. Spine (Phila Pa 1976). 1988 Mar; 13(3):294-300. PMID: 3388115.
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    321. Black CD, Kroczek RA, Barbet J, Weinstein JN, Shevach EM. Induction of IL-2 receptor expression in vivo: response to concanavalin A. Cell Immunol. 1988 Feb; 111(2):420-32. PMID: 3123074.
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    322. Borden EC, Bradley EC, Evans CH, Fox CF, Metzgar RS, Mitchell MS, Weinstein JN. Biotechnology products in cancer therapy: a colloquium. Cancer Res. 1988 Jan 01; 48(1):223-5. PMID: 3275492.
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    323. Weinstein J, Lee EU, McEntee K, Lai PH, Paulson JC. Primary structure of beta-galactoside alpha 2,6-sialyltransferase. Conversion of membrane-bound enzyme to soluble forms by cleavage of the NH2-terminal signal anchor. J Biol Chem. 1987 Dec 25; 262(36):17735-43. PMID: 3121604.
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    324. Keenan AM, Weinstein JN, Carrasquillo JA, Bunn PA, Reynolds JC, Foon KA, Smarte NC, Ghosh B, Fejka RM, Larson SM, et al. Immunolymphoscintigraphy and the dose dependence of 111In-labeled T101 monoclonal antibody in patients with cutaneous T-cell lymphoma. Cancer Res. 1987 Nov 15; 47(22):6093-9. PMID: 3499222.
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    325. Holton OD, Black CD, Parker RJ, Covell DG, Barbet J, Sieber SM, Talley MJ, Weinstein JN. Biodistribution of monoclonal IgG1, F(ab')2, and Fab' in mice after intravenous injection. Comparison between anti-B cell (anti-Lyb8.2) and irrelevant (MOPC-21) antibodies. J Immunol. 1987 Nov 01; 139(9):3041-9. PMID: 3499463.
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    326. Paulson JC, Weinstein J, Ujita EL, Riggs KJ, Lai PH. The membrane-binding domain of a rat liver Golgi sialyltransferase. Biochem Soc Trans. 1987 Aug; 15(4):618-20. PMID: 3315771.
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    327. Mulshine JL, Keenan AM, Carrasquillo JA, Walsh T, Linnoila RI, Holton OD, Harwell J, Larson SM, Bunn PA, Weinstein JN. Immunolymphoscintigraphy of pulmonary and mediastinal lymph nodes in dogs: a new approach to lung cancer imaging. Cancer Res. 1987 Jul 01; 47(13):3572-6. PMID: 3472655.
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    328. Eger RR, Covell DG, Carrasquillo JA, Abrams PG, Foon KA, Reynolds JC, Schroff RW, Morgan AC, Larson SM, Weinstein JN. Kinetic model for the biodistribution of an 111In-labeled monoclonal antibody in humans. Cancer Res. 1987 Jun 15; 47(12):3328-36. PMID: 3581071.
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    329. Parker RJ, Keenan AM, Dower SK, Steller MA, Holton OD, Sieber SM, Weinstein JN. Targeting of murine radiolabeled monoclonal antibodies in the lymphatics. Cancer Res. 1987 Apr 15; 47(8):2073-6. PMID: 3828997.
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    330. Quill H, Carlson L, Fox BS, Weinstein JN, Schwartz RH. Optimization of antigen presentation to T cell hybridomas by purified Ia molecules in planar membranes. Ia molecule polymorphism determines the antigenic fine specificity of the response to cytochrome c peptides. J Immunol Methods. 1987 Apr 02; 98(1):29-41. PMID: 2435810.
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    331. Keenan AM, Weinstein JN, Mulshine JL, Carrasquillo JA, Bunn PA, Reynolds JC, Larson SM. Immunolymphoscintigraphy in patients with lymphoma after subcutaneous injection of indium-111-labeled T101 monoclonal antibody. J Nucl Med. 1987 Jan; 28(1):42-6. PMID: 3794811.
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    332. Weinstein JN, Eger RR, Covell DG, Black CD, Mulshine J, Carrasquillo JA, Larson SM, Keenan AM. The pharmacology of monoclonal antibodies. Ann N Y Acad Sci. 1987; 507:199-210. PMID: 3327413.
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    333. Goel VK, Nishiyama K, Weinstein JN, Liu YK. Mechanical properties of lumbar spinal motion segments as affected by partial disc removal. Spine (Phila Pa 1976). 1986 Dec; 11(10):1008-12. PMID: 3576336.
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    334. Sindel BD, Baker MD, Maisels MJ, Weinstein J. A comparison of the pupillary and cardiovascular effects of various mydriatic agents in preterm infants. J Pediatr Ophthalmol Strabismus. 1986 Nov-Dec; 23(6):273-6. PMID: 3454368.
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    335. Roth J, Taatjes DJ, Weinstein J, Paulson JC, Greenwell P, Watkins WM. Differential subcompartmentation of terminal glycosylation in the Golgi apparatus of intestinal absorptive and goblet cells. J Biol Chem. 1986 Oct 25; 261(30):14307-12. PMID: 3095318.
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    336. Lotze MT, Carrasquillo JA, Weinstein JN, Bryant GJ, Perentesis P, Reynolds JC, Matis LA, Eger RR, Keenan AM, Hellström I, et al. Monoclonal antibody imaging of human melanoma. Radioimmunodetection by subcutaneous or systemic injection. Ann Surg. 1986 Sep; 204(3):223-35. PMID: 3753057.
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    337. Covell DG, Barbet J, Holton OD, Black CD, Parker RJ, Weinstein JN. Pharmacokinetics of monoclonal immunoglobulin G1, F(ab')2, and Fab' in mice. Cancer Res. 1986 Aug; 46(8):3969-78. PMID: 3731067.
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    338. Steller MA, Parker RJ, Covell DG, Holton OD, Keenan AM, Sieber SM, Weinstein JN. Optimization of monoclonal antibody delivery via the lymphatics: the dose dependence. Cancer Res. 1986 Apr; 46(4 Pt 1):1830-4. PMID: 3948166.
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    339. Weinstein JN, Holton OD, Black CD, Keenan AM, Covell DG, Spaulding GF, Barbet J, Steller MA, Sieber SM, Talley MJ, et al. Regional delivery of monoclonal antitumor antibodies: detection and possible treatment of lymph node metastases. Prog Clin Biol Res. 1986; 212:169-81. PMID: 3714728.
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    340. Weinstein JN, Blumenthal R, Klausner RD. Carboxyfluorescein leakage assay for lipoprotein-liposome interaction. Methods Enzymol. 1986; 128:657-68. PMID: 3724529.
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    341. Klausner RD, Blumenthal R, Innerarity T, Weinstein JN. The interaction of apolipoprotein A-I with small unilamellar vesicles of L-alpha-dipalmitoylphosphatidylcholine. J Biol Chem. 1985 Nov 05; 260(25):13719-27. PMID: 3932344.
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    342. Roth J, Taatjes DJ, Lucocq JM, Weinstein J, Paulson JC. Demonstration of an extensive trans-tubular network continuous with the Golgi apparatus stack that may function in glycosylation. Cell. 1985 Nov; 43(1):287-95. PMID: 3000603.
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    343. Goel VK, Fromknecht SJ, Nishiyama K, Weinstein J, Liu YK. The role of lumbar spinal elements in flexion. Spine (Phila Pa 1976). 1985 Jul-Aug; 10(6):516-23. PMID: 4081866.
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    344. Weinstein JN, Parker RJ, Holton OD, Keenan AM, Covell DG, Black CD, Sieber SM. Lymphatic delivery of monoclonal antibodies: potential for detection and treatment of lymph node metastases. Cancer Invest. 1985; 3(1):85-95. PMID: 3971201.
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    345. Weinstein JN, Steller MA, Covell DG, Holton OD, Keenan AM, Sieber SM, Parker RJ. Monoclonal antitumor antibodies in the lymphatics. Cancer Treat Rep. 1984 Jan; 68(1):257-64. PMID: 6692428.
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    346. Weinstein JN, Leserman LD. Liposomes as drug carriers in cancer chemotherapy. Pharmacol Ther. 1984; 24(2):207-33. PMID: 6379684.
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    347. Weinstein JN. Liposomes as drug carriers in cancer therapy. Cancer Treat Rep. 1984 Jan; 68(1):127-35. PMID: 6692424.
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    348. Weinstein JN, Steller MA, Keenan AM, Covell DG, Key ME, Sieber SM, Oldham RK, Hwang KM, Parker RJ. Monoclonal antibodies in the lymphatics: selective delivery to lymph node metastases of a solid tumor. Science. 1983 Oct 28; 222(4622):423-6. PMID: 6623082.
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    349. Klausner RD, Kempf C, Weinstein JN, Blumenthal R, Van Renswoude J. The folding of ovalbumin. Renaturation in vitro versus biosynthesis in vitro. Biochem J. 1983 Jun 15; 212(3):801-10. PMID: 6882395.
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    350. Miller M, Weinstein JN, Wlodawer A. Preliminary x-ray analysis of single crystals of ovalbumin and plakalbumin. J Biol Chem. 1983 May 10; 258(9):5864-6. PMID: 6853552.
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    351. Blumenthal R, Kempf C, Van Renswoude J, Weinstein JN, Klausner RD. Voltage-dependent orientation of membrane proteins. J Cell Biochem. 1983; 22(1):55-67. PMID: 6321525.
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    352. Kumar N, Blumenthal R, Henkart M, Weinstein JN, Klausner RD. Aggregation and calcium-induced fusion of phosphatidylcholine vesicle-tubulin complexes. J Biol Chem. 1982 Dec 25; 257(24):15137-44. PMID: 6897406.
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    353. Weinstein JN, Parker RJ, Keenan AM, Dower SK, Morse HC, Sieber SM. Monoclonal anitbodies in the lymphatics: toward the diagnosis and therapy of tumor metastases. Science. 1982 Dec 24; 218(4579):1334-7. PMID: 7146917.
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    354. Weinstein J, de Souza-e-Silva U, Paulson JC. Purification of a Gal beta 1 to 4GlcNAc alpha 2 to 6 sialyltransferase and a Gal beta 1 to 3(4)GlcNAc alpha 2 to 3 sialyltransferase to homogeneity from rat liver. J Biol Chem. 1982 Nov 25; 257(22):13835-44. PMID: 7142179.
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    355. Weinstein J, de Souza-e-Silva U, Paulson JC. Sialylation of glycoprotein oligosaccharides N-linked to asparagine. Enzymatic characterization of a Gal beta 1 to 3(4)GlcNAc alpha 2 to 3 sialyltransferase and a Gal beta 1 to 4GlcNAc alpha 2 to 6 sialyltransferase from rat liver. J Biol Chem. 1982 Nov 25; 257(22):13845-53. PMID: 7142180.
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    356. Paulson JC, Weinstein J, Dorland L, van Halbeek H, Vliegenthart JF. Newcastle disease virus contains a linkage-specific glycoprotein sialidase. Application to the localization of sialic acid residues in N-linked oligosaccharides of alpha 1-acid glycoprotein. J Biol Chem. 1982 Nov 10; 257(21):12734-8. PMID: 6290480.
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    357. Klausner RD, Berman M, Blumenthal R, Weinstein JN, Caplan SR. Compartmental analysis of light-induced proton movement in reconstituted bacteriorhodopsin vesicles. Biochemistry. 1982 Jul 20; 21(15):3643-50. PMID: 7115689.
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    358. Paulson JC, Weinstein J, de Souza-e-Silva U. Identification of a Gal beta 1 goes to 3GlcNAc alpha 2 goes to 3 sialyltransferase in rat liver. J Biol Chem. 1982 Apr 25; 257(8):4034-7. PMID: 7068622.
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    359. Kempf C, Klausner RD, Weinstein JN, Van Renswoude J, Pincus M, Blumenthal R. Voltage-dependent trans-bilayer orientation of melittin. J Biol Chem. 1982 Mar 10; 257(5):2469-76. PMID: 7061434.
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    360. Blumenthal R, Ralston E, Dragsten P, Leserman LD, Weinstein JN. Lipid vesicle-cell interactions: analysis of a model for transfer of contents from adsorbed vesicles to cells. Membr Biochem. 1982; 4(4):283-303. PMID: 6897439.
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    361. Blumenthal R, Klausner RD, Weinstein JN. Voltage-dependent Changes of a Membrane Protein in Lipid Model Membranes: Studies with the Hepatic Asialoglycoprotein Receptor. Biophys J. 1982 Jan; 37(1):122-4. PMID: 19431437.
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    362. Weinstein JN, Blumenthal R, van Renswoude J, Kempf C, Klausner RD. Charge clusters and the orientation of membrane proteins. J Membr Biol. 1982; 66(3):203-12. PMID: 6808138.
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    363. Weinstein JN, Klausner RD, Innerarity T, Ralston E, Blumenthal R. Phase transition release, a new approach to the interaction of proteins with lipid vesicles. Application to lipoproteins. Biochim Biophys Acta. 1981 Oct 02; 647(2):270-84. PMID: 6895324.
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    364. Klausner RD, Kumar N, Weinstein JN, Blumenthal R, Flavin M. Interaction of tubulin with phospholipid vesicles. I. Association with vesicles at the phase transition. J Biol Chem. 1981 Jun 10; 256(11):5879-85. PMID: 6894593.
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    365. Kumar N, Klausner RD, Weinstein JN, Blumenthal R, Flavin M. Interaction of tubulin with phospholipid vesicles. II. Physical changes of the protein. J Biol Chem. 1981 Jun 10; 256(11):5886-9. PMID: 6894594.
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    366. Pitas RE, Innerarity TL, Weinstein JN, Mahley RW. Acetoacetylated lipoproteins used to distinguish fibroblasts from macrophages in vitro by fluorescence microscopy. Arteriosclerosis. 1981 May-Jun; 1(3):177-85. PMID: 6895305.
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    367. Yatvin MB, Mühlensiepen H, Porschen W, Weinstein JN, Feinendegen LE. Selective delivery of liposome-associated cis-dichlorodiammineplatinum(II) by heat and its influence on tumor drug uptake and growth. Cancer Res. 1981 May; 41(5):1602-7. PMID: 7194141.
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    368. Parker RJ, Sieber SM, Weinstein JN. Effect of liposome encapsulation of a fluorescent dye on its uptake by the lymphatics of the rat. Pharmacology. 1981; 23(3):128-36. PMID: 7280007.
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    369. Leserman LD, Barbet J, Kourilsky F, Weinstein JN. Targeting to cells of fluorescent liposomes covalently coupled with monoclonal antibody or protein A. Nature. 1980 Dec 11; 288(5791):602-4. PMID: 7442804.
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    370. Leserman LD, Weinstein JN, Moore JJ, Terry WD. Specific interaction of myeloma tumor cells with hapten-bearing liposomes containing methotrexate and carboxyfluorescein. Cancer Res. 1980 Dec; 40(12):4768-74. PMID: 7438109.
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    371. Blumenthal R, Klausner RD, Weinstein JN. Voltage-dependent translocation of the asialoglycoprotein receptor across lipid membranes. Nature. 1980 Nov 27; 288(5789):333-8. PMID: 6253830.
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    372. Guo LS, Hamilton RL, Goerke J, Weinstein JN, Havel RJ. Interaction of unilamellar liposomes with serum lipoproteins and apolipoproteins. J Lipid Res. 1980 Nov; 21(8):993-1003. PMID: 6780646.
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    373. Ali M, Weinstein J, Biempica L, Halpern A, Das KM. Cronkhite-Canada syndrome: report of a case with bacteriologic, immunologic, and electron microscopic studies. Gastroenterology. 1980 Oct; 79(4):731-6. PMID: 7409392.
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    374. Klausner RD, Bridges K, Tsunoo H, Blumenthal R, Weinstein JN, Ashwell G. Reconstitution of the hepatic asialoglycoprotein receptor with phospholipid vesicles. Proc Natl Acad Sci U S A. 1980 Sep; 77(9):5087-91. PMID: 6254057.
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    375. Leserman LD, Weinstein JN, Blumenthal R, Terry WD. Receptor-mediated endocytosis of antibody-opsonized liposomes by tumor cells. Proc Natl Acad Sci U S A. 1980 Jul; 77(7):4089-93. PMID: 7001454.
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    376. Weinstein JN, Magin RL, Cysyk RL, Zaharko DS. Treatment of solid L1210 murine tumors with local hyperthermia and temperature-sensitive liposomes containing methotrexate. Cancer Res. 1980 May; 40(5):1388-95. PMID: 6892792.
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    377. Ralston E, Blumenthal R, Weinstein JN, Sharrow SO, Henkart P. Lysophosphatidylcholine in liposomal membranes: enhanced permeability but little effect on transfer of a water-soluble fluorescent marker into human lymphocytes. Biochim Biophys Acta. 1980 Apr 24; 597(3):543-51. PMID: 7378402.
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    378. Van Renswoude AJ, Blumenthal R, Weinstein JN. Thin-layer chromatography with agarose gels. A quick, simple method for evaluating liposome size. Biochim Biophys Acta. 1980; 595(1):151-6. PMID: 7349878.
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    379. Blumenthal R, Klausner RD, Weinstein JN, Bridges K, Tsunoo H, Ashwell G. Voltage-dependent translocation of hepatic binding protein. Ann N Y Acad Sci. 1980; 358:368-9. PMID: 6938158.
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    380. Dragsten P, Henkart P, Blumenthal R, Weinstein J, Schlessinger J. Lateral diffusion of surface immunoglobulin, Thy-1 antigen, and a lipid probe in lymphocyte plasma membranes. Proc Natl Acad Sci U S A. 1979 Oct; 76(10):5163-7. PMID: 291930.
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    381. Wlodawer A, Segrest JP, Chung BH, Chiovetti R, Weinstein JN. High-density lipoprotein recombinants: evidence for a bicycle tire micelle structure obtained by neutron scattering and electron microscopy. FEBS Lett. 1979 Aug 15; 104(2):231-5. PMID: 225206.
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    382. Weinstein JN, Magin RL, Yatvin MB, Zaharko DS. Liposomes and local hyperthermia: selective delivery of methotrexate to heated tumors. Science. 1979 Apr 13; 204(4389):188-91. PMID: 432641.
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    383. Leserman LD, Weinstein JN, Blumenthal R, Sharrow SO, Terry WD. Binding of antigen-bearing fluorescent liposomes to the murine myeloma tumor MOPC 315. J Immunol. 1979 Feb; 122(2):585-91. PMID: 368242.
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    384. Yatvin MB, Weinstein JN, Dennis WH, Blumenthal R. Design of liposomes for enhanced local release of drugs by hyperthermia. Science. 1978 Dec 22; 202(4374):1290-3. PMID: 364652.
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    385. Weinstein JN, Blumenthal R, Sharrow SO, Henkart PA. Antibody-mediated targeting of liposomes. Binding to lymphocytes does not ensure incorporation of vesicle contents into the cells. Biochim Biophys Acta. 1978 May 18; 509(2):272-88. PMID: 656414.
      View in: PubMed
    386. Pagano RE, Weinstein JN. Interactions of liposomes with mammalian cells. Annu Rev Biophys Bioeng. 1978; 7:435-68. PMID: 352245.
      View in: PubMed
    387. Blumenthal R, Weinstein JN, Sharrow SO, Henkart P. Liposome--lymphocyte interaction: saturable sites for transfer and intracellular release of liposome contents. Proc Natl Acad Sci U S A. 1977 Dec; 74(12):5603-7. PMID: 271988.
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    388. Weinstein JN, Yoshikami S, Henkart P, Blumenthal R, Hagins WA. Liposome-cell interaction: transfer and intracellular release of a trapped fluorescent marker. Science. 1977 Feb 04; 195(4277):489-92. PMID: 835007.
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    389. Blumenthal R, Weinstein JN, Henkart P. Lipid model membrane studies on immune cytotoxic mechanisms. Adv Exp Med Biol. 1977; 84:495-507. PMID: 302636.
      View in: PubMed
    390. Weinstein JN, Leitz FB. Electric power from differences in salinity: the dialytic battery. Science. 1976 Feb 13; 191(4227):557-9. PMID: 17792805.
      View in: PubMed
    391. Melmon KL, Bourne HR, Weinstein J, Sela M. Receptors for histamine can be detected on the surface of selected leukocytes. Science. 1972 Aug 25; 177(4050):707-9. PMID: 4403369.
      View in: PubMed
    392. Bluhm AL, Weinstein J, Sousa JA. Free radicals in tobacco smoke. Nature. 1971 Feb 12; 229(5285):500. PMID: 4925214.
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    393. Weinstein JN, Caplan SR. Charge-mosaic membranes: dialytic separation of electrolytes from nonelectrolytes and amino acids. Science. 1970 Jul 17; 169(3942):296-8. PMID: 5450359.
      View in: PubMed
    394. Weinstein JN, Caplan SR. Charge-mosaic membranes: enhanced permeability and negative osmosis with a symmetrical salt. Science. 1968 Jul 05; 161(3836):70-2. PMID: 5655268.
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    395. WEINSTEIN J, SCOTT A, HUNTER FE. THE ACTION OF GRAMICIDIN D ON ISOLATED LIVER MITOCHONDRIA. J Biol Chem. 1964 Sep; 239:3031-7. PMID: 14217892.
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    396. HUNTER FE, SCOTT A, HOFFSTEN PE, GEBICKI JM, WEINSTEIN J, SCHNEIDER A. STUDIES ON THE MECHANISM OF SWELLING, LYSIS, AND DISTINTEGRATION OF ISOLATED LIVER MITOCHONDRIA EXPOSED TO MIXTURES OF OXIDIZED AND REDUCED GLUTATHIONE. J Biol Chem. 1964 Feb; 239:614-21. PMID: 14171852.
      View in: PubMed
    397. HUNTER FE, SCOTT A, WEINSTEIN J, SCHNEIDER A. EFFECTS OF PHOSPHATE, ARSENATE, AND OTHER SUBSTANCES ON SWELLING AND LIPID PEROXIDE FORMATION WHEN MITOCHONDRIA ARE TREATED WITH OXIDIZED AND REDUCED GLUTATHIONE. J Biol Chem. 1964 Feb; 239:622-30. PMID: 14171853.
      View in: PubMed
    398. HUNTER FE, SCOTT A, HOFFSTEN PE, GUERRA F, WEINSTEIN J, SCHNEIDER A, SCHUTZ B, FINK J, FORD L, SMITH E. STUDIES ON THE MECHANISM OF ASCORBATE-INDUCED SWELLING AND LYSIS OF ISOLATED LIVER MITOCHANDRIA. J Biol Chem. 1964 Feb; 239:604-13. PMID: 14169167.
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    399. HUNTER FE, GEBICKI JM, HOFFSTEN PE, WEINSTEIN J, SCOTT A. Swelling and lysis of rat liver mitochondria induced by ferrous ions. J Biol Chem. 1963 Feb; 238:828-35. PMID: 13955764.
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    400. Invasive bladder cancer. Clinical Cancer Research. 21:4514-4524.
    401. Modulation of autophagy and its potential for cancer therapy. Drugs of the Future. 36:919-925.
    402. Targeted metabolomic analysis of amino acid response to L-asparaginase in adherent cells. Metabolomics. 1-11.
    403. Gene Expression Profile of the Clinically Aggressive Micropapillary Variant of Bladder Cancer. European Urology.
    404. Framework for identifying common aberrations in DNA copy number data. 122-136.
    405. Detection of tumor in lymph nodes by delivery of monoclonal antibodies via the lymphatics.
    406. TCGASpliceSeq a compendium of alternative mRNA splicing in cancer. Nucleic Acids Research. 44:D1018-D1022.
    407. Genes suppressed by DNA methylation in non-small cell lung cancer reveal the epigenetics of epithelial-mesenchymal transition. BMC Genomics. 1-15.
    408. Erratum. Science. 222:566.
    409. Carboxyfluorescein as a probe for liposome-cell interactions effect of impurities, and purification of the dye. BBA - Biomembranes. 649:133-137.
    410. The Molecular Taxonomy of Primary Prostate Cancer. Cell. 163:1011-1025.
    411. Mutational profiles reveal an aberrant TGF-β-CEA regulated pathway in colon adenomas. PLoS One. 11.
    412. Piezodialysis. Desalination. 16:245-252.
    413. Erratum. Genome Research. 16:947.
    414. Selective localization of liposomal encapsulated methotrexate in locally heated murine tumors.
    415. Dipyridamole potentiates the activity of zidovudine and other dideoxynucleosides against HIV-1 in cultured cells. Annals of the New York Academy of Sciences. 616:613-616.
    416. Characterization of long non-coding RNA transcriptome in clear-cell renal cell carcinoma by next-generation deep sequencing. Molecular Oncology. 9:32-43.
    417. Comprehensive molecular portraits of human breast tumours. Nature. 490:61-70.
    418. Liposome-mediated transfer of 6-carboxyfluorescein into lymphocytes.
    419. Erratum. Science. 169:359.
    420. A strategy for predicting the chemosensitivity of human cancers and its application to drug discovery. Journal of Urology. 179:787.
    421. Altered expression and splicing of ESRP1 in malignant melanoma correlates with epithelial- mesenchymal status and Tumor-Associated immune cytolytic activity. Cancer immunology research. 4:552-561.
    422. A nonequilibrium thermodynamic formulation of transport in charge mosaic membranes. Federation Proceedings. 33.
    423. Long non-coding RNA profiling links subgroup classification of endometrioid endometrial carcinomas with trithorax and polycomb complex aberrations. Oncotarget. 6:39865-39876.
    424. PathwaysWeb. Bioinformatics. 32:312-314.
    425. Analysis of gene expression data of the NCI 60 cancer cell lines using Bayesian hierarchical effects model. 228-235.
    426. Definition of volume flow in the Kedem-Katchalsky formulation of electroosmosis. Journal of Physical Chemistry. 77:2710-2711.
    427. Integrating global gene expression and radiation survival parameters across the 60 cell lines of the National Cancer Institute Anticancer Drug Screen (Cancer Research (January 15, 2008) 68 (415-424)). Cancer Research. 68:1245.
    428. Dipyridamole mediated enhanced antiproliferative activity of 10-ethyl-lo-deazaaminopterin (10-edam) against human lung cancer cell lines. Journal of Cellular Biochemistry. 62:165-172.
    429. Meta-Analysis of the Luminal and Basal Subtypes of Bladder Cancer and the Identification of Signature Immunohistochemical Markers for Clinical Use. EBioMedicine. 12:105-117.
    430. The Cancer Genome Atlas Project on Muscle-invasive Bladder Cancer. European Urology Focus. 1:94-95.
    431. Corrigendum. Nature Communications. 6.
    432. TANRIC. Cancer Research. 75:3728-3737.
    433. Genes suppressed by DNA methylation in non-small cell lung cancer reveal the epigenetics of epithelial-mesenchymal transition. BMC Genomics. 15.
    434. TransVar. Nature Methods. 12:1002-1003.
    435. Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas. Nature Genetics. 48:607-616.
    436. Inference of large-scale topology of gene regulation networks by neural nets. 3969-3975.
    437. Transport properties of charge-mosaic membranes II. Experimental studies. Desalination. 12:1-17.
    438. Comprehensive Molecular Portraits of Invasive Lobular Breast Cancer. Cell. 163:506-519.
    439. Genetic function approximation in the molecular pharmacology of cancer. 2490-2493.
    440. Antitumor activity of selective hyperthermia in tumor-bearing rats using thermosensitive magnetoliposomes as a new hyperthermic material. Drug Delivery: Journal of Delivery and Targeting of Therapeutic Agents. 4:37-42.
    441. DELIVERY OF MONOCLONAL ANTIBODIES THROUGH THE LYMPHATICS. 884-888.
    442. COMBO. Annals of the New York Academy of Sciences. 616:490-494.
    443. Liposomes as 'targeted' drug carriers. Pure and Applied Chemistry. 53:2241-2254.
    444. Three microarray platforms. BMC Genomics. 6.
    445. TRANSPORT PROPERTIES OF CHARGE-MOSAIC MEMBRANES - 1. THEORETICAL MODELS. Desalination. 11:341-377.
    446. Transport properties of charge-mosaic membranes III. Piezodialysis. Desalination. 12:19-33.
    447. Information resources for liposome Research. Journal of Liposome Research. 5:837-844.
    448. CellMiner. 315-323.
    449. Co-occurring genomic alterations define major subsets of KRAS-mutant lung adenocarcinoma with distinct biology, immune profiles, and therapeutic vulnerabilities. Cancer Discovery. 5:861-878.
    450. A Patient-Derived, Pan-Cancer EMT Signature Identifies Global Molecular Alterations and Immune Target Enrichment Following Epithelial-to-Mesenchymal Transition. Clinical Cancer Research. 22:609-620.
    451. Erratum. Cell. 157:753.
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