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Institute for Clinical and Translational Research

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BOGDAN A CZERNIAK

TitleProfessor
InstitutionMD Anderson
DepartmentPathology
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Guo CC, Majewski T, Zhang L, Yao H, Bondaruk J, Wang Y, Zhang S, Wang Z, Lee JG, Lee S, Cogdell D, Zhang M, Wei P, Grossman HB, Kamat A, Duplisea JJ, Ferguson JE, Huang H, Dadhania V, Gao J, Dinney C, Weinstein JN, Baggerly K, McConkey D, Czerniak B. Dysregulation of EMT Drives the Progression to Clinically Aggressive Sarcomatoid Bladder Cancer. Cell Rep. 2019 May 07; 27(6):1781-1793.e4. PMID: 31067463.
      View in: PubMed
    2. Majewski T, Yao H, Bondaruk J, Chung W, Lee S, Lee JG, Zhang S, Cogdell D, Yang G, Choi W, Dinney C, Grossman HB, Logothetis C, Scherer SE, Guo CC, Zhang L, Wei P, Weinstein JN, Issa JP, Baggerly K, McConkey DJ, Czerniak B. Whole-Organ Genomic Characterization of Mucosal Field Effects Initiating Bladder Carcinogenesis. Cell Rep. 2019 Feb 19; 26(8):2241-2256.e4. PMID: 30784602.
      View in: PubMed
    3. Duplisea JJ, Petros FG, Li R, Fellman B, Guo CC, Czerniak BA, Siefker-Radtke AO, Araujo JC, Dinney CPN, Matin SF. Outcomes of nonmetastatic micropapillary variant upper tract urothelial carcinoma. Urol Oncol. 2019 Jun; 37(6):354.e19-354.e26. PMID: 30777393.
      View in: PubMed
    4. Guo CC, Czerniak B. Bladder Cancer in the Genomic Era. Arch Pathol Lab Med. 2019 Jun; 143(6):695-704. PMID: 30672335.
      View in: PubMed
    5. Robertson AG, Kim J, Al-Ahmadie H, Bellmunt J, Guo G, Cherniack AD, Hinoue T, Laird PW, Hoadley KA, Akbani R, Castro MAA, Gibb EA, Kanchi RS, Gordenin DA, Shukla SA, Sanchez-Vega F, Hansel DE, Czerniak BA, Reuter VE, Su X, de Sa Carvalho B, Chagas VS, Mungall KL, Sadeghi S, Pedamallu CS, Lu Y, Klimczak LJ, Zhang J, Choo C, Ojesina AI, Bullman S, Leraas KM, Lichtenberg TM, Wu CJ, Schultz N, Getz G, Meyerson M, Mills GB, McConkey DJ, Weinstein JN, Kwiatkowski DJ, Lerner SP. Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer. Cell. 2018 08 09; 174(4):1033. PMID: 30096301.
      View in: PubMed
    6. van der Heijden AG, Mengual L, Ingelmo-Torres M, Lozano JJ, van Rijt-van de Westerlo CCM, Baixauli M, Geavlete B, Moldoveanud C, Ene C, Dinney CP, Czerniak B, Schalken JA, Kiemeney LALM, Ribal MJ, Witjes JA, Alcaraz A. Urine cell-based DNA methylation classifier for monitoring bladder cancer. Clin Epigenetics. 2018; 10:71. PMID: 29854012.
      View in: PubMed
    7. Wang G, Xiao L, Zhang M, Kamat AM, Siefker-Radtke A, Dinney CP, Czerniak B, Guo CC. Small cell carcinoma of the urinary bladder: a clinicopathological and immunohistochemical analysis of 81 cases. Hum Pathol. 2018 09; 79:57-65. PMID: 29763719.
      View in: PubMed
    8. Zhang S, Wang Y, Bondaruk J, Majewski T, Yao H, Lee S, Lee JG, Cogdell D, Lotan Y, Dinney C, Wei P, Baggerly K, Czerniak B. Detection of Bladder Cancer in Urine Sediments by a Novel Multicolor Fluorescence In Situ Hybridization (Quartet) Test. Eur Urol Focus. 2018 Feb 07. PMID: 29428551.
      View in: PubMed
    9. Robertson AG, Kim J, Al-Ahmadie H, Bellmunt J, Guo G, Cherniack AD, Hinoue T, Laird PW, Hoadley KA, Akbani R, Castro MAA, Gibb EA, Kanchi RS, Gordenin DA, Shukla SA, Sanchez-Vega F, Hansel DE, Czerniak BA, Reuter VE, Su X, de Sa Carvalho B, Chagas VS, Mungall KL, Sadeghi S, Pedamallu CS, Lu Y, Klimczak LJ, Zhang J, Choo C, Ojesina AI, Bullman S, Leraas KM, Lichtenberg TM, Wu CJ, Schultz N, Getz G, Meyerson M, Mills GB, McConkey DJ, Weinstein JN, Kwiatkowski DJ, Lerner SP. Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer. Cell. 2017 Oct 19; 171(3):540-556.e25. PMID: 28988769.
      View in: PubMed
    10. Zhang M, Adeniran AJ, Vikram R, Tamboli P, Pettaway C, Bondaruk J, Liu J, Baggerly K, Czerniak B. Carcinoma of the urethra. Hum Pathol. 2018 02; 72:35-44. PMID: 28827100.
      View in: PubMed
    11. Wang G, Huang H, Kamat AM, Siefker-Radtke A, Dinney CP, Troncoso P, Czerniak B, Guo CC. High-grade neuroendocrine carcinoma of the urachus-report of 3 cases. Hum Pathol. 2017 09; 67:126-133. PMID: 28823575.
      View in: PubMed
    12. Wang Z, Kim TB, Peng B, Karam J, Creighton C, Joon A, Kawakami F, Trevisan P, Jonasch E, Chow CW, Canales JR, Tamboli P, Tannir N, Wood C, Monzon F, Baggerly K, Varella-Garcia M, Czerniak B, Wistuba I, Mills G, Shaw K, Chen K, Sircar K. Sarcomatoid Renal Cell Carcinoma Has a Distinct Molecular Pathogenesis, Driver Mutation Profile, and Transcriptional Landscape. Clin Cancer Res. 2017 Nov 01; 23(21):6686-6696. PMID: 28710314.
      View in: PubMed
    13. Metcalfe MJ, Ferguson JE, Li R, Xiao L, Guo CC, Czerniak BA, Siefker-Radtke A, Pretzsch SM, Navai N, McConkey DJ, Kamat AM, Campbell M, Dinney C. Impact of High-risk Features and Effect of Neoadjuvant Chemotherapy in Urothelial Cancer Patients with Invasion into the Lamina Propria on Transurethral Resection in the Absence of Deep Muscle Invasion. Eur Urol Focus. 2017 12; 3(6):577-583. PMID: 28753816.
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    14. Moss TJ, Qi Y, Xi L, Peng B, Kim TB, Ezzedine NE, Mosqueda ME, Guo CC, Czerniak BA, Ittmann M, Wheeler DA, Lerner SP, Matin SF. Comprehensive Genomic Characterization of Upper Tract Urothelial Carcinoma. Eur Urol. 2017 10; 72(4):641-649. PMID: 28601352.
      View in: PubMed
    15. Roth B, Jayaratna I, Sundi D, Cheng T, Melquist J, Choi W, Porten S, Nitti G, Navai N, Wszolek M, Guo C, Czerniak B, McConkey D, Dinney C. Employing an orthotopic model to study the role of epithelial-mesenchymal transition in bladder cancer metastasis. Oncotarget. 2017 May 23; 8(21):34205-34222. PMID: 27494900.
      View in: PubMed
    16. Fox MD, Xiao L, Zhang M, Kamat AM, Siefker-Radtke A, Zhang L, Dinney CP, Czerniak B, Guo CC. Plasmacytoid Urothelial Carcinoma of the Urinary Bladder: A Clinicopathologic and Immunohistochemical Analysis of 49 Cases. Am J Clin Pathol. 2017 May 01; 147(5):500-506. PMID: 28371875.
      View in: PubMed
    17. Murugan P, Rao P, Tamboli P, Czerniak B, Guo CC. Primary Ewing Sarcoma / Primitive Neuroectodermal Tumor of the Kidney: A Clinicopathologic Study of 23 Cases. Pathol Oncol Res. 2018 Jan; 24(1):153-159. PMID: 28429277.
      View in: PubMed
    18. Mobley A, Zhang S, Bondaruk J, Wang Y, Majewski T, Caraway NP, Huang L, Shoshan E, Velazquez-Torres G, Nitti G, Lee S, Lee JG, Fuentes-Mattei E, Willis D, Zhang L, Guo CC, Yao H, Baggerly K, Lotan Y, Lerner SP, Dinney C, McConkey D, Bar-Eli M, Czerniak B. Aurora Kinase A is a Biomarker for Bladder Cancer Detection and Contributes to its Aggressive Behavior. Sci Rep. 2017 01 19; 7:40714. PMID: 28102366.
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    19. Ochoa AE, Choi W, Su X, Siefker-Radtke A, Czerniak B, Dinney C, McConkey DJ. Specific micro-RNA expression patterns distinguish the basal and luminal subtypes of muscle-invasive bladder cancer. Oncotarget. 2016 Dec 06; 7(49):80164-80174. PMID: 27845906.
      View in: PubMed
    20. Fernández MI, Williams SB, Willis DL, Slack RS, Dickstein RJ, Parikh S, Chiong E, Siefker-Radtke AO, Guo CC, Czerniak BA, McConkey DJ, Shah JB, Pisters LL, Grossman HB, Dinney CP, Kamat AM. Clinical risk stratification in patients with surgically resectable micropapillary bladder cancer. BJU Int. 2017 05; 119(5):684-691. PMID: 27753185.
      View in: PubMed
    21. Yang J, Platt LT, Maity B, Ahlers KE, Luo Z, Lin Z, Chakravarti B, Ibeawuchi SR, Askeland RW, Bondaruk J, Czerniak BA, Fisher RA. RGS6 is an essential tumor suppressor that prevents bladder carcinogenesis by promoting p53 activation and DNMT1 downregulation. Oncotarget. 2016 Oct 25; 7(43):69159-69172. PMID: 27713144.
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    22. Tetzlaff MT, Singh RR, Seviour EG, Curry JL, Hudgens CW, Bell D, Wimmer DA, Ning J, Czerniak BA, Zhang L, Davies MA, Prieto VG, Broaddus RR, Ram P, Luthra R, Esmaeli B. Next-generation sequencing identifies high frequency of mutations in potentially clinically actionable genes in sebaceous carcinoma. J Pathol. 2016 09; 240(1):84-95. PMID: 27287813.
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    23. Dadhania V, Zhang M, Zhang L, Bondaruk J, Majewski T, Siefker-Radtke A, Guo CC, Dinney C, Cogdell DE, Zhang S, Lee S, Lee JG, Weinstein JN, Baggerly K, McConkey D, Czerniak B. Meta-Analysis of the Luminal and Basal Subtypes of Bladder Cancer and the Identification of Signature Immunohistochemical Markers for Clinical Use. EBioMedicine. 2016 Oct; 12:105-117. PMID: 27612592.
      View in: PubMed
    24. Zhang L, Baladandayuthapani V, Zhu H, Baggerly KA, Majewski T, Czerniak BA, Morris JS. Functional CAR models for large spatially correlated functional datasets. J Am Stat Assoc. 2016; 111(514):772-786. PMID: 28018013.
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    25. Oshiro H, Czerniak BA, Sakamaki K, Tsuta K, Bondaruk J, Keyhani A, Dinney CP, Nagai T, Kamat AM. Comparison between whole mount tissue preparations and virtual tissue microarray samples for measuring Ki-67 and apoptosis indices in human bladder cancer: A cross-sectional study. Medicine (Baltimore). 2016 Aug; 95(31):e4500. PMID: 27495099.
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    26. Olivieri M, Ferro M, Terreri S, Durso M, Romanelli A, Avitabile C, De Cobelli O, Messere A, Bruzzese D, Vannini I, Marinelli L, Novellino E, Zhang W, Incoronato M, Ilardi G, Staibano S, Marra L, Franco R, Perdonà S, Terracciano D, Czerniak B, Liguori GL, Colonna V, Fabbri M, Febbraio F, Calin GA, Cimmino A. Long non-coding RNA containing ultraconserved genomic region 8 promotes bladder cancer tumorigenesis. Oncotarget. 2016 Apr 12; 7(15):20636-54. PMID: 26943042.
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    27. Guo CC, Dadhania V, Zhang L, Majewski T, Bondaruk J, Sykulski M, Wronowska W, Gambin A, Wang Y, Zhang S, Fuentes-Mattei E, Kamat AM, Dinney C, Siefker-Radtke A, Choi W, Baggerly KA, McConkey D, Weinstein JN, Czerniak B. Gene Expression Profile of the Clinically Aggressive Micropapillary Variant of Bladder Cancer. Eur Urol. 2016 10; 70(4):611-620. PMID: 26988609.
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    28. Czerniak B, Dinney C, McConkey D. Origins of Bladder Cancer. Annu Rev Pathol. 2016 05 23; 11:149-74. PMID: 26907529.
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    29. Linehan WM, Spellman PT, Ricketts CJ, Creighton CJ, Fei SS, Davis C, Wheeler DA, Murray BA, Schmidt L, Vocke CD, Peto M, Al Mamun AA, Shinbrot E, Sethi A, Brooks S, Rathmell WK, Brooks AN, Hoadley KA, Robertson AG, Brooks D, Bowlby R, Sadeghi S, Shen H, Weisenberger DJ, Bootwalla M, Baylin SB, Laird PW, Cherniack AD, Saksena G, Haake S, Li J, Liang H, Lu Y, Mills GB, Akbani R, Leiserson MD, Raphael BJ, Anur P, Bottaro D, Albiges L, Barnabas N, Choueiri TK, Czerniak B, Godwin AK, Hakimi AA, Ho TH, Hsieh J, Ittmann M, Kim WY, Krishnan B, Merino MJ, Mills Shaw KR, Reuter VE, Reznik E, Shelley CS, Shuch B, Signoretti S, Srinivasan R, Tamboli P, Thomas G, Tickoo S, Burnett K, Crain D, Gardner J, Lau K, Mallery D, Morris S, Paulauskis JD, Penny RJ, Shelton C, Shelton WT, Sherman M, Thompson E, Yena P, Avedon MT, Bowen J, Gastier-Foster JM, Gerken M, Leraas KM, Lichtenberg TM, Ramirez NC, Santos T, Wise L, Zmuda E, Demchok JA, Felau I, Hutter CM, Sheth M, Sofia HJ, Tarnuzzer R, Wang Z, Yang L, Zenklusen JC, Zhang J, Ayala B, Baboud J, Chudamani S, Liu J, Lolla L, Naresh R, Pihl T, Sun Q, Wan Y, Wu Y, Ally A, Balasundaram M, Balu S, Beroukhim R, Bodenheimer T, Buhay C, Butterfield YS, Carlsen R, Carter SL, Chao H, Chuah E, Clarke A, Covington KR, Dahdouli M, Dewal N, Dhalla N, Doddapaneni HV, Drummond JA, Gabriel SB, Gibbs RA, Guin R, Hale W, Hawes A, Hayes DN, Holt RA, Hoyle AP, Jefferys SR, Jones SJ, Jones CD, Kalra D, Kovar C, Lewis L, Li J, Ma Y, Marra MA, Mayo M, Meng S, Meyerson M, Mieczkowski PA, Moore RA, Morton D, Mose LE, Mungall AJ, Muzny D, Parker JS, Perou CM, Roach J, Schein JE, Schumacher SE, Shi Y, Simons JV, Sipahimalani P, Skelly T, Soloway MG, Sougnez C, Tam A, Tan D, Thiessen N, Veluvolu U, Wang M, Wilkerson MD, Wong T, Wu J, Xi L, Zhou J, Bedford J, Chen F, Fu Y, Gerstein M, Haussler D, Kasaian K, Lai P, Ling S, Radenbaugh A, Van Den Berg D, Weinstein JN, Zhu J, Albert M, Alexopoulou I, Andersen JJ, Auman JT, Bartlett J, Bastacky S, Bergsten J, Blute ML, Boice L, Bollag RJ, Boyd J, Castle E, Chen YB, Cheville JC, Curley E, Davies B, DeVolk A, Dhir R, Dike L, Eckman J, Engel J, Harr J, Hrebinko R, Huang M, Huelsenbeck-Dill L, Iacocca M, Jacobs B, Lobis M, Maranchie JK, McMeekin S, Myers J, Nelson J, Parfitt J, Parwani A, Petrelli N, Rabeno B, Roy S, Salner AL, Slaton J, Stanton M, Thompson RH, Thorne L, Tucker K, Weinberger PM, Winemiller C, Zach LA, Zuna R. Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma. N Engl J Med. 2016 Jan 14; 374(2):135-45. PMID: 26536169.
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    30. McConkey DJ, Choi W, Shen Y, Lee IL, Porten S, Matin SF, Kamat AM, Corn P, Millikan RE, Dinney C, Czerniak B, Siefker-Radtke AO. A Prognostic Gene Expression Signature in the Molecular Classification of Chemotherapy-naïve Urothelial Cancer is Predictive of Clinical Outcomes from Neoadjuvant Chemotherapy: A Phase 2 Trial of Dose-dense Methotrexate, Vinblastine, Doxorubicin, and Cisplatin with Bevacizumab in Urothelial Cancer. Eur Urol. 2016 05; 69(5):855-62. PMID: 26343003.
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    31. Varkaris A, Corn PG, Parikh NU, Efstathiou E, Song JH, Lee YC, Aparicio A, Hoang AG, Gaur S, Thorpe L, Maity SN, Bar Eli M, Czerniak BA, Shao Y, Alauddin M, Lin SH, Logothetis CJ, Gallick GE. Integrating Murine and Clinical Trials with Cabozantinib to Understand Roles of MET and VEGFR2 as Targets for Growth Inhibition of Prostate Cancer. Clin Cancer Res. 2016 Jan 01; 22(1):107-21. PMID: 26272062.
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    32. Dhillon J, Liang Y, Kamat AM, Siefker-Radtke A, Dinney CP, Czerniak B, Guo CC. Urachal carcinoma: a pathologic and clinical study of 46 cases. Hum Pathol. 2015 Dec; 46(12):1808-14. PMID: 26364859.
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    33. Dadhania V, Czerniak B, Guo CC. Adenocarcinoma of the urinary bladder. Am J Clin Exp Urol. 2015; 3(2):51-63. PMID: 26309895.
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    34. Sircar K, Yoo SY, Majewski T, Wani K, Patel LR, Voicu H, Torres-Garcia W, Verhaak RG, Tannir N, Karam JA, Jonasch E, Wood CG, Tamboli P, Baggerly KA, Aldape KD, Czerniak B. Biphasic components of sarcomatoid clear cell renal cell carcinomas are molecularly similar to each other, but distinct from, non-sarcomatoid renal carcinomas. J Pathol Clin Res. 2015 Oct; 1(4):212-24. PMID: 27499906.
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    35. Singh RR, Murugan P, Patel LR, Voicu H, Yoo SY, Majewski T, Mehrotra M, Wani K, Tannir N, Karam JA, Jonasch E, Wood CG, Creighton CJ, Medeiros LJ, Broaddus RR, Tamboli P, Baggerly KA, Aldape KD, Czerniak B, Luthra R, Sircar K. Intratumoral morphologic and molecular heterogeneity of rhabdoid renal cell carcinoma: challenges for personalized therapy. Mod Pathol. 2015 Sep; 28(9):1225-35. PMID: 26111976.
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    36. McConkey DJ, Choi W, Ochoa A, Siefker-Radtke A, Czerniak B, Dinney CP. Therapeutic opportunities in the intrinsic subtypes of muscle-invasive bladder cancer. Hematol Oncol Clin North Am. 2015 Apr; 29(2):377-94, x-xi. PMID: 25836941.
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    37. Li W, Liang Y, Deavers MT, Kamat AM, Matin SF, Dinney CP, Czerniak B, Guo CC. Uroplakin II is a more sensitive immunohistochemical marker than uroplakin III in urothelial carcinoma and its variants. Am J Clin Pathol. 2014 Dec; 142(6):864-71. PMID: 25389341.
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    38. Dinney CP, Hansel D, McConkey D, Shipley W, Hagan M, Dreicer R, Lerner S, Czerniak B, Waldman F, Groshen S, True LD, Petricoin E, Theodorescu D, Hruszkewycz A, Bajorin D. Novel neoadjuvant therapy paradigms for bladder cancer: results from the National Cancer Center Institute Forum. Urol Oncol. 2014 Nov; 32(8):1108-15. PMID: 25443274.
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    39. Willis DL, Fernandez MI, Dickstein RJ, Parikh S, Shah JB, Pisters LL, Guo CC, Henderson S, Czerniak BA, Grossman HB, Dinney CP, Kamat AM. Clinical outcomes of cT1 micropapillary bladder cancer. J Urol. 2015 Apr; 193(4):1129-34. PMID: 25254936.
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    40. Apolo AB, Hoffman V, Kaag MG, Latini DM, Lee CT, Rosenberg JE, Knowles M, Theodorescu D, Czerniak BA, Efstathiou JA, Albert ML, Sridhar SS, Margulis V, Matin SF, Galsky MD, Hansel D, Kamat AM, Flaig TW, Smith AB, Messing E, Zipursky Quale D, Lotan Y. Summary of the 8th Annual Bladder Cancer Think Tank: Collaborating to move research forward. Urol Oncol. 2015 Feb; 33(2):53-64. PMID: 25065704.
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    41. Choi W, Czerniak B, Ochoa A, Su X, Siefker-Radtke A, Dinney C, McConkey DJ. Intrinsic basal and luminal subtypes of muscle-invasive bladder cancer. Nat Rev Urol. 2014 Jul; 11(7):400-10. PMID: 24960601.
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    42. Liang Y, Heitzman J, Kamat AM, Dinney CP, Czerniak B, Guo CC. Differential expression of GATA-3 in urothelial carcinoma variants. Hum Pathol. 2014 Jul; 45(7):1466-72. PMID: 24745616.
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    43. Choi W, Porten S, Kim S, Willis D, Plimack ER, Hoffman-Censits J, Roth B, Cheng T, Tran M, Lee IL, Melquist J, Bondaruk J, Majewski T, Zhang S, Pretzsch S, Baggerly K, Siefker-Radtke A, Czerniak B, Dinney CP, McConkey DJ. Identification of distinct basal and luminal subtypes of muscle-invasive bladder cancer with different sensitivities to frontline chemotherapy. Cancer Cell. 2014 Feb 10; 25(2):152-65. PMID: 24525232.
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    44. Comprehensive molecular characterization of urothelial bladder carcinoma. Nature. 2014 Mar 20; 507(7492):315-22. PMID: 24476821.
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    45. Solomon DA, Kim JS, Bondaruk J, Shariat SF, Wang ZF, Elkahloun AG, Ozawa T, Gerard J, Zhuang D, Zhang S, Navai N, Siefker-Radtke A, Phillips JJ, Robinson BD, Rubin MA, Volkmer B, Hautmann R, Küfer R, Hogendoorn PC, Netto G, Theodorescu D, James CD, Czerniak B, Miettinen M, Waldman T. Frequent truncating mutations of STAG2 in bladder cancer. Nat Genet. 2013 Dec; 45(12):1428-30. PMID: 24121789.
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    46. Stanton ML, Xiao L, Czerniak BA, Guo CC. Urothelial tumors of the urinary bladder in young patients: a clinicopathologic study of 59 cases. Arch Pathol Lab Med. 2013 Oct; 137(10):1337-41. PMID: 24079760.
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    47. Ferdin J, Nishida N, Wu X, Nicoloso MS, Shah MY, Devlin C, Ling H, Shimizu M, Kumar K, Cortez MA, Ferracin M, Bi Y, Yang D, Czerniak B, Zhang W, Schmittgen TD, Voorhoeve MP, Reginato MJ, Negrini M, Davuluri RV, Kunej T, Ivan M, Calin GA. HINCUTs in cancer: hypoxia-induced noncoding ultraconserved transcripts. Cell Death Differ. 2013 Dec; 20(12):1675-87. PMID: 24037088.
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    48. Culp SH, Dickstein RJ, Grossman HB, Pretzsch SM, Porten S, Daneshmand S, Cai J, Groshen S, Siefker-Radtke A, Millikan RE, Czerniak B, Navai N, Wszolek MF, Kamat AM, Dinney CP. Refining patient selection for neoadjuvant chemotherapy before radical cystectomy. J Urol. 2014 Jan; 191(1):40-7. PMID: 23911605.
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    49. Tarrant WP, Czerniak BA, Guo CC. Relationship between primary and metastatic testicular germ cell tumors: a clinicopathologic analysis of 100 cases. Hum Pathol. 2013 Oct; 44(10):2220-6. PMID: 23856516.
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    50. Comprehensive molecular characterization of clear cell renal cell carcinoma. Nature. 2013 Jul 04; 499(7456):43-9. PMID: 23792563.
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    51. Gust KM, McConkey DJ, Awrey S, Hegarty PK, Qing J, Bondaruk J, Ashkenazi A, Czerniak B, Dinney CP, Black PC. Fibroblast growth factor receptor 3 is a rational therapeutic target in bladder cancer. Mol Cancer Ther. 2013 Jul; 12(7):1245-54. PMID: 23657946.
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    52. Schweighofer CD, Coombes KR, Majewski T, Barron LL, Lerner S, Sargent RL, O'Brien S, Ferrajoli A, Wierda WG, Czerniak BA, Medeiros LJ, Keating MJ, Abruzzo LV. Genomic variation by whole-genome SNP mapping arrays predicts time-to-event outcome in patients with chronic lymphocytic leukemia: a comparison of CLL and HapMap genotypes. J Mol Diagn. 2013 Mar; 15(2):196-209. PMID: 23273604.
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    53. Lee S, Lee I, Jung Y, McConkey D, Czerniak B. In-frame cDNA library combined with protein complementation assay identifies ARL11-binding partners. PLoS One. 2012; 7(12):e52290. PMID: 23272234.
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    54. Tran MN, Choi W, Wszolek MF, Navai N, Lee IL, Nitti G, Wen S, Flores ER, Siefker-Radtke A, Czerniak B, Dinney C, Barton M, McConkey DJ. The p63 protein isoform ?Np63a inhibits epithelial-mesenchymal transition in human bladder cancer cells: role of MIR-205. J Biol Chem. 2013 Feb 01; 288(5):3275-88. PMID: 23239884.
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    55. Dayyani F, Czerniak BA, Sircar K, Munsell MF, Millikan RE, Dinney CP, Siefker-Radtke AO. Plasmacytoid urothelial carcinoma, a chemosensitive cancer with poor prognosis, and peritoneal carcinomatosis. J Urol. 2013 May; 189(5):1656-61. PMID: 23159581.
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    56. Majewski T, Spiess PE, Bondaruk J, Black P, Clarke C, Benedict W, Dinney CP, Grossman HB, Tang KS, Czerniak B. Detection of bladder cancer using proteomic profiling of urine sediments. PLoS One. 2012; 7(8):e42452. PMID: 22879988.
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    57. Alexandrescu S, Tatevian N, Czerniak BA, Covinsky MH, Burns NK, Brown RE. Morphoproteomics provides support for TGF-ß pathway signaling in the osteoclastogenesis and immune dysregulation of osteolytic Langerhans cell histiocytosis. Int J Clin Exp Pathol. 2012; 5(6):503-11. PMID: 22949932.
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    58. Si Q, Dancer J, Stanton ML, Tamboli P, Ro JY, Czerniak BA, Shen SS, Guo CC. Small cell carcinoma of the kidney: a clinicopathologic study of 14 cases. Hum Pathol. 2011 Nov; 42(11):1792-8. PMID: 21733553.
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    59. Guo CC, Wang Y, Xiao L, Troncoso P, Czerniak BA. The relationship of TMPRSS2-ERG gene fusion between primary and metastatic prostate cancers. Hum Pathol. 2012 May; 43(5):644-9. PMID: 21937078.
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    60. Sabichi AL, Lee JJ, Grossman HB, Liu S, Richmond E, Czerniak BA, De la Cerda J, Eagle C, Viner JL, Palmer JL, Lerner SP. A randomized controlled trial of celecoxib to prevent recurrence of nonmuscle-invasive bladder cancer. Cancer Prev Res (Phila). 2011 Oct; 4(10):1580-9. PMID: 21881030.
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    61. Chung W, Bondaruk J, Jelinek J, Lotan Y, Liang S, Czerniak B, Issa JP. Detection of bladder cancer using novel DNA methylation biomarkers in urine sediments. Cancer Epidemiol Biomarkers Prev. 2011 Jul; 20(7):1483-91. PMID: 21586619.
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    140. Kaufman AM, Slaton JW, Czerniak BA, Grossman HB. Transitional cell carcinoma of the bladder with involvement of vasa deferentia. J Urol. 1998 Jan; 159(1):204-5. PMID: 9400477.
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    141. Pollack A, Wu CS, Czerniak B, Zagars GK, Benedict WF, McDonnell TJ. Abnormal bcl-2 and pRb expression are independent correlates of radiation response in muscle-invasive bladder cancer. Clin Cancer Res. 1997 Oct; 3(10):1823-9. PMID: 9815569.
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    142. Pollack A, Czerniak B, Zagars GK, Hu SX, Wu CS, Dinney CP, Chyle V, Benedict WF. Retinoblastoma protein expression and radiation response in muscle-invasive bladder cancer. Int J Radiat Oncol Biol Phys. 1997 Oct 01; 39(3):687-95. PMID: 9336151.
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    143. Chaturvedi V, Li L, Hodges S, Johnston D, Ro JY, Logothetis C, von Eschenbach AC, Batsakis JG, Czerniak B. Superimposed histologic and genetic mapping of chromosome 17 alterations in human urinary bladder neoplasia. Oncogene. 1997 May 01; 14(17):2059-70. PMID: 9160886.
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    144. Häckel C, Czerniak B, Ayala AG, Radig K, Roessner A. Expression of plasminogen activators and plasminogen activator inhibitor 1 in dedifferentiated chondrosarcoma. Cancer. 1997 Jan 01; 79(1):53-8. PMID: 8988726.
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    145. Chyle V, Pollack A, Czerniak B, Stephens LC, Zagars GK, Terry NH, Meyn RE. Apoptosis and downstaging after preoperative radiotherapy for muscle-invasive bladder cancer. Int J Radiat Oncol Biol Phys. 1996 May 01; 35(2):281-7. PMID: 8635934.
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    146. Wu CS, Pollack A, Czerniak B, Chyle V, Zagars GK, Dinney CP, Hu SX, Benedict WF. Prognostic value of p53 in muscle-invasive bladder cancer treated with preoperative radiotherapy. Urology. 1996 Mar; 47(3):305-10. PMID: 8633392.
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    147. Cook PD, Czerniak B, Chan JK, Mackay B, Ordóñez NG, Ayala AG, Rosai J. Nodular spindle-cell vascular transformation of lymph nodes. A benign process occurring predominantly in retroperitoneal lymph nodes draining carcinomas that can simulate Kaposi's sarcoma or metastatic tumor. Am J Surg Pathol. 1995 Sep; 19(9):1010-20. PMID: 7661274.
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    148. Simms WW, Ordóñez NG, Johnston D, Ayala AG, Czerniak B. p53 expression in dedifferentiated chondrosarcoma. Cancer. 1995 Jul 15; 76(2):223-7. PMID: 8625095.
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    149. Coughlan B, Feliz A, Ishida T, Czerniak B, Dorfman HD. p53 expression and DNA ploidy of cartilage lesions. Hum Pathol. 1995 Jun; 26(6):620-4. PMID: 7774891.
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    150. Czerniak B, Rosai J. Role of cytology in intraoperative diagnosis. A practical guide. Pathol Annu. 1995; 30 Pt 2:83-102. PMID: 8570281.
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    151. Dorfman HD, Czerniak B. Bone cancers. Cancer. 1995 Jan 01; 75(1 Suppl):203-10. PMID: 8000997.
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    152. Czerniak B, Cohen GL, Etkind P, Deitch D, Simmons H, Herz F, Koss LG. Concurrent mutations of coding and regulatory sequences of the Ha-ras gene in urinary bladder carcinomas. Hum Pathol. 1992 Nov; 23(11):1199-204. PMID: 1427748.
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    153. Czerniak B, Herz F, Wersto RP, Koss LG. Asymmetric distribution of oncogene products at mitosis. Proc Natl Acad Sci U S A. 1992 Jun 01; 89(11):4860-3. PMID: 1350677.
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    154. Koss LG, Czerniak B. Image analysis and flow cytometry of tumors of prostate and bladder; with a comment on molecular biology of urothelial tumors. Monogr Pathol. 1992; (34):112-28. PMID: 1406738.
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    155. Herz F, Czerniak B, Deitch D, Wersto RP, Simmons DA, Koss LG. Protein expression in relation to the cell cycle of exponentially growing human prostatic epithelial cells. Cell Prolif. 1991 May; 24(3):321-30. PMID: 2039807.
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    156. Biology and management of bladder cancer. N Engl J Med. 1991 Jan 10; 324(2):125-6. PMID: 1984179.
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    157. Czerniak B, Deitch D, Simmons H, Etkind P, Herz F, Koss LG. Ha-ras gene codon 12 mutation and DNA ploidy in urinary bladder carcinoma. Br J Cancer. 1990 Nov; 62(5):762-3. PMID: 2245167.
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    158. Czerniak B, Herz F, Wersto RP, Alster P, Puszkin E, Schwarz E, Koss LG. Quantitation of oncogene products by computer-assisted image analysis and flow cytometry. J Histochem Cytochem. 1990 Apr; 38(4):463-6. PMID: 1969431.
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    159. Czerniak B, Rojas-Corona RR, Dorfman HD. Morphologic diversity of long bone adamantinoma. The concept of differentiated (regressing) adamantinoma and its relationship to osteofibrous dysplasia. Cancer. 1989 Dec 01; 64(11):2319-34. PMID: 2804923.
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    160. Czerniak B, Herz F, Gorczyca W, Koss LG. Expression of ras oncogene p21 protein in early gastric carcinoma and adjacent gastric epithelia. Cancer. 1989 Oct 01; 64(7):1467-73. PMID: 2550123.
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    161. Koss LG, Czerniak B, Herz F, Wersto RP. Flow cytometric measurements of DNA and other cell components in human tumors: a critical appraisal. Hum Pathol. 1989 Jun; 20(6):528-48. PMID: 2470666.
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    162. Czerniak B, Chen R, Tuziak T, Markiewski M, Kram A, Gorczyca W, Deitch D, Herz F, Koss LG. Expression of ras oncogene p21 protein in relation to regional spread of human breast carcinomas. Cancer. 1989 May 15; 63(10):2008-13. PMID: 2467732.
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    163. Czerniak B, Darzynkiewicz Z, Herz F, Wersto RP, Koss LG. Flow cytometry in clinical oncology: cell cycle and DNA ploidy in assessing tumor behavior. Mater Med Pol. 1989 Jan-Mar; 21(1):3-9. PMID: 2699343.
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    164. Czerniak B, Tuziak T, Markiewski M, Kram A, Gorczyca W, Herz F, Koss LG. [Expression of ras oncogenes in early and advanced breast cancer in women]. Nowotwory. 1988 May-Jun; 38(3):145-51. PMID: 3072522.
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    165. Gorczyca W, Lubinski J, Czerniak B. [Lymphoma of the breast detected by cytological examination]. Patol Pol. 1988 Jan-Mar; 39(1):66-70. PMID: 3412823.
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    166. Czerniak B, Eppich EM, Gorczyca W, Herz F, Koss LG. [Cytometric measurements of DNA ploidy in cancer of the large intestine]. Patol Pol. 1988 Jan-Mar; 39(1):1-12. PMID: 3412818.
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    167. Czerniak B, Herz F, Koss LG, Schlom J. ras oncogene p21 as a tumor marker in the cytodiagnosis of gastric and colonic carcinomas. Cancer. 1987 Nov 15; 60(10):2432-6. PMID: 3311346.
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    168. Czerniak B, Herz F, Wersto RP, Koss LG. Modification of Ha-ras oncogene p21 expression and cell cycle progression in the human colonic cancer cell line HT-29. Cancer Res. 1987 Jun 01; 47(11):2826-30. PMID: 3105868.
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    169. Czerniak B, Herz F, Wersto RP, Koss LG. Expression of Ha-ras oncogene p21 protein in relation to the cell cycle of cultured human tumor cells. Am J Pathol. 1987 Mar; 126(3):411-6. PMID: 3548406.
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    170. Czerniak B, Herz F, Koss LG. DNA distribution patterns in early gastric carcinomas. A Feulgen cytometric study of gastric brush smears. Cancer. 1987 Jan 01; 59(1):113-7. PMID: 2431753.
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    171. Woyke S, Gorczyca W, Czerniak B, Depczynska A, Marlicz K. [Use of cytological methods in the diagnosis of cancer of the esophagus and cardia]. Nowotwory. 1986 Apr-Jun; 36(2):98-105. PMID: 3786167.
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    172. Czerniak B, Czerniak E, Marzecki Z. [Usefulness of fine-needle aspiration biopsy of lymph nodes in the diagnosis of Hodgkin's disease]. Nowotwory. 1986 Jan-Mar; 36(1):12-6. PMID: 3786153.
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    173. Czerniak B, Woyke S, Marlicz K. [Cytodiagnosis of early stomach cancer]. Patol Pol. 1986 Jan-Mar; 37(1):1-7. PMID: 3029654.
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    174. Czerniak B, Woyke S, Marlicz K. [Cytological-histological correlations in stomach cancer]. Patol Pol. 1985 Jul-Sep; 36(3):217-28. PMID: 3012446.
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    175. Czerniak B, Papenhausen PR, Herz F, Koss LG. Flow cytometric identification of cancer cells in effusions with Ca1 monoclonal antibody. Cancer. 1985 Jun 15; 55(12):2783-8. PMID: 3888371.
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    176. Czerniak B, Koss LG. Expression of Ca antigen on human urinary bladder tumors. Cancer. 1985 May 15; 55(10):2380-3. PMID: 3886123.
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    177. Czerniak B, Woyke S, Daniel B, Krzysztolik Z, Koss LG. Diagnosis of orbital tumors by aspiration biopsy guided by computerized tomography. Cancer. 1984 Dec 01; 54(11):2385-9. PMID: 6498730.
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    178. Czerniak B, Darzynkiewicz Z, Staiano-Coico L, Herz F, Koss LG. Expression of Ca antigen in relation to cell cycle in cultured human tumor cells. Cancer Res. 1984 Oct; 44(10):4342-6. PMID: 6432310.
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    179. Czerniak B, Koss LG, Sherman A. Nuclear pores and DNA ploidy in human bladder carcinomas. Cancer Res. 1984 Sep; 44(9):3752-6. PMID: 6744293.
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    180. Czerniak B, Marlicz K. Surface coat of enterocytes in chronic duodenitis. Mater Med Pol. 1984 Jan-Mar; 16(1):9-14. PMID: 6527574.
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    181. Czerniak B. Ultrastructure of the surface coat of the mesothelial and cancer cells from human effusions. Mater Med Pol. 1984 Jan-Mar; 16(1):3-7. PMID: 6527570.
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    182. Krzystolik Z, Czerniak B, Woyke S, Daniel B. [Use of thin-needle aspiration biopsy under computerized tomography control in the diagnosis of orbital tumors]. Pol Przegl Radiol. 1983 May-Jun; 47(3):185-8. PMID: 6369271.
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    183. Czerniak B, Woyke S, Domagala W, Krzysztolik Z. Fine needle aspiration cytology of intraocular malignant melanoma. Acta Cytol. 1983 Mar-Apr; 27(2):157-65. PMID: 6573087.
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    184. Starzynska T, Marlicz K, Depczynska A, Woyke S, Czerniak B. [Endoscopy with guided biopsy and cytological examination in the preoperative diagnosis of cancer of the upper digestive tract]. Pol Arch Med Wewn. 1983 Jan; 69(1):47-51. PMID: 6193500.
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    185. Krzystolik Z, Czerniak B, Woyke S. [Diagnosis of intraocular melanoma by thin-needle aspiration biopsy]. Klin Oczna. 1982 Sep; 84(9):279-82. PMID: 7162114.
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    186. Czerniak B, Woyke S, Lukaszyk I. The intercellular junctions of the cancer cells from human effusions. Acta Med Pol. 1981; 22(3):217-29. PMID: 7348091.
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    187. Woyke S, Domagala W, Czerniak B, Strokowska M. Fine needle aspiration cytology of malignant melanoma of the skin. Acta Cytol. 1980 Nov-Dec; 24(6):529-38. PMID: 6934680.
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    188. Czerniak B, Woyke S. Cell surface material of the mesothelial and cancer cells from human effusions. Acta Med Pol. 1980; 21(4):313-4. PMID: 6166152.
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    189. Lubinski J, Woyke S, Czerniak B. Concanavalin A distribution on the surface of the mesothelial and cancer cells from human effusions. Electron and fluorescent microscopic observations. Acta Med Pol. 1980; 21(4):377-8. PMID: 7246250.
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    190. Czerniak B, Jaroszewicz A, Solecki J. [Ultrastructure of the skeletal muscles in myotonia congenita]. Neuropatol Pol. 1979 Jul-Sep; 17(3):477-85. PMID: 503320.
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    191. Marlicz K, Czerniak B, Szymanski Z. [Duodenitis diagnosed by means of duodenoscopy: personal observations]. Pol Arch Med Wewn. 1979 Mar; 61(3):187-94. PMID: 440987.
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    192. Domagala W, Czerniak B, Woyke S. Distribution of surface coat on human cancer cells from body cavity fluids. A scanning electron microscopic study. Acta Med Pol. 1979; 20(4):377-8. PMID: 546091.
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    193. Woyke S, Czerniak B, Lukaszyk I. Changes in tight junction of the cancer cells from human effusions. Acta Med Pol. 1979; 20(4):475-6. PMID: 546123.
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    194. Woyke S, Czerniak B. Fine needle aspiration cytology of metastatic myxopapillary ependymoma. Acta Med Pol. 1979; 20(1):47-8. PMID: 495211.
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    195. Woyke S, Czerniak B, Lukaszyk I. Application of freeze-fractured replicas for evaluation of nuclear envelope of malignant cells from human effusions. Acta Med Pol. 1979; 20(4):477. PMID: 546124.
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    196. Lubinski J, Czerniak B. Distribution and movement of concanavalin-A receptors on the surface of cancer cells from human effusions. Acta Med Pol. 1979; 20(4):429-30. PMID: 546110.
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    197. Woyke S, Czerniak B. Fine needle aspiration cytology of metastatic myxopapillary ependymoma. Acta Cytol. 1978 Sep-Oct; 22(5):312-5. PMID: 281836.
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    198. Czerniak B, Woyke S, Cecerko J. [Ultrastructure of ependymoma myxopapillare]. Neurol Neurochir Pol. 1978 Mar-Apr; 12(2):173-8. PMID: 673124.
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    199. Czerniak B. [Ultrastructure of cells from fluids in human serous cavities. Study of the external covering (glycocalix) as well as of flattening and spreading of the cells]. Ann Acad Med Stetin. 1978; 24:565-83. PMID: 742756.
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    200. Krzystolik Z, Czerniak B. [Choroid leiomyoma (author's transl)]. Klin Oczna. 1977 Aug; 47(8):345-6. PMID: 904241.
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    201. Woyke S, Czerniak B. The morphology of cells in effusions settled on glass. Acta Cytol. 1977 Jul-Aug; 21(4):508-13. PMID: 269599.
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    202. Woyke S, Czerniak B. The surface coat of the human effusion cells. Acta Cytol. 1977 May-Jun; 21(3):447-54. PMID: 268128.
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    203. Woyke S, Czerniak B. The surface coat of human effusions cells. Acta Med Pol. 1977; 18(4):379-80. PMID: 76418.
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    204. Czerniak B, Mietkiewski J, Mazuryk R. [Effect of methotrexate on growth kinetics in Ehrlich's carcinoma]. Patol Pol. 1976 Jul-Sep; 27(3):219-30. PMID: 967534.
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    205. Domagala W, Czerniak B, Mietkiewski J, Szyroki L. [Ultrastructure of Kaposi's sarcoma]. Patol Pol. 1975 Oct-Dec; 26(4):517-24. PMID: 1215076.
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    206. Wiechowski S, Czerniak B, Marzymska G, Stankiewicz-Borkiel D. [Blastoma pulmonis]. Gruzlica. 1975 Aug; 43(8):743-9. PMID: 1158180.
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    207. Therapeutic Opportunities in the Intrinsic Subtypes of Muscle-Invasive Bladder Cancer. Hematology/Oncology Clinics of North America. 29:377-394.
    208. Blood group antigen expression in bladder tumors. Journal of Experimental and Clinical Cancer Research. 13:139-144.
    209. Uncommon Cancers of the Bladder. 18-26.
    210. Comparison between whole mount tissue preparations and virtual tissue microarray samples for measuring Ki-67 and apoptosis indices in human bladder cancer. Medicine (United States). 95.
    211. The use of thin-needle aspiration biopsy under control of computerized tomography in the diagnosis of orbital tumours. 185-188.
    212. Erratum. Nature Genetics. 41:1156.
    213. Clinical risk stratification in patients with surgically resectable micropapillary bladder cancer. BJU International.
    214. Cytodiagnosis of early gastric carcinoma. Patologia Polska. 37:1-7.
    215. The molecular pathology of sarcomas. 475-491.
    216. Response to Bismar and Trpkov. Modern Pathology. 23:1041-1042.
    217. Uncommon Cancers of the Bladder. 23-33.
    218. Reply. Orthopedics. 34:837.
    219. Erratum to. World Journal of Urology. 30:723.
    220. Integrating murine and clinical trials with cabozantinib to understand roles of MET and VEGFR2 as targets for growth inhibition of prostate cancer. Clinical Cancer Research. 22:107-121.
    221. Erratum. Nature Genetics. 41:1156.
    222. Urachal carcinoma. Human Pathology. 46:1808-1814.
    223. Gene Expression Profile of the Clinically Aggressive Micropapillary Variant of Bladder Cancer. European Urology.
    224. A Prognostic Gene Expression Signature in the Molecular Classification of Chemotherapy-naïve Urothelial Cancer is Predictive of Clinical Outcomes from Neoadjuvant Chemotherapy. European Urology.
    225. Long non-coding RNA containing ultraconserved genomic region 8 promotes bladder cancer tumorigenesis. Oncotarget. 7:20636-20654.
    226. Ultrastructure of cells from fluids of serous cavities in man. Roczniki Pomorskiej Akademii Medycznej W Szczecinie. Vol. 24:565-583.
    227. Molecular pathology and biomarkers of bladder cancer. 159-176.
    228. Mesenchymal chondrosarcoma. International Journal of Surgical Pathology. 8:291-301.
    229. Necrosis assessment in renal carcinoma-reply. Human Pathology. 43:151-152.
    230. RGS6 is an essential tumor suppressor that prevents bladder carcinogenesis by promoting p53 activation and DNMT1 downregulation. Oncotarget. 7:69159-69172.
    231. Epithelial phenotype in Ewing's sarcoma/primitive neuroectodermal tumor. International Journal of Surgical Pathology. 8:59-65.
    232. Functional CAR Models for Large Spatially Correlated Functional Datasets. Journal of the American Statistical Association. 111:772-786.
    233. Intratumoral morphologic and molecular heterogeneity of rhabdoid renal cell carcinoma. Modern Pathology. 28:1225-1235.
    234. RE. Polish Journal of Pathology. 61:183.
    235. Meta-Analysis of the Luminal and Basal Subtypes of Bladder Cancer and the Identification of Signature Immunohistochemical Markers for Clinical Use. EBioMedicine. 12:105-117.
    236. Origins of Bladder Cancer. Annual Review of Pathology. 11:149-174.
    237. Specific micro-RNA expression patterns distinguish the basal and luminal subtypes of muscle-invasive bladder cancer. Oncotarget. 7:80164-80174.
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