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FABIAN SINZ

TitleAdjunct Assistant Professor
InstitutionBaylor College of Medicine
DepartmentDepartment of Neuroscience
AddressOne Baylor Plaza
Houston, TX 77030
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Celii B, Papadopoulos S, Ding Z, Fahey PG, Wang E, Papadopoulos C, Kunin AB, Patel S, Bae JA, Bodor AL, Brittain D, Buchanan J, Bumbarger DJ, Castro MA, Cobos E, Dorkenwald S, Elabbady L, Halageri A, Jia Z, Jordan C, Kapner D, Kemnitz N, Kinn S, Lee K, Li K, Lu R, Macrina T, Mahalingam G, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Schneider-Mizell CM, Silversmith W, Takeno M, Torres R, Turner NL, Wong W, Wu J, Yu SC, Yin W, Xenes D, Kitchell LM, Rivlin PK, Rose VA, Bishop CA, Wester B, Froudarakis E, Walker EY, Sinz F, Seung HS, Collman F, da Costa NM, Reid RC, Pitkow X, Tolias AS, Reimer J, Papadopoulos S, Kunin A, Sinz FH. NEURD offers automated proofreading and feature extraction for connectomics. bioRxiv. 2024 Sep 23. PMID: 36993282; PMCID: PMC10055177.
      Citations:    
    2. Wang EY, Fahey PG, Ponder K, Ding Z, Chang A, Muhammad T, Patel S, Ding Z, Tran D, Fu J, Papadopoulos S, Franke K, Ecker AS, Reimer J, Pitkow X, Sinz FH, Tolias AS, Wang EY, Fahey PG, Ding Z, Papadopoulos S, Ponder K, Weis MA, Chang A, Muhammad T, Patel S, Ding Z, Tran D, Fu J, Schneider-Mizell CM, Reid RC, Collman F, da Costa NM, Franke K, Ecker AS, Reimer J, Pitkow X, Sinz FH, Tolias AS. Foundation model of neural activity predicts response to new stimulus types and anatomy. bioRxiv. 2024 Aug 31. PMID: 36993435; PMCID: PMC10055288.
      Citations:    
    3. Fu J, Pierzchlewicz PA, Willeke KF, Bashiri M, Muhammad T, Diamantaki M, Froudarakis E, Restivo K, Ponder K, Denfield GH, Sinz F, Tolias AS, Franke K. Heterogeneous orientation tuning in the primary visual cortex of mice diverges from Gabor-like receptive fields in primates. Cell Rep. 2024 Aug 27; 43(8):114639. PMID: 39167488.
      Citations:    Fields:    Translation:AnimalsCells
    4. Wu N, Valera I, Sinz F, Ecker A, Euler T, Qiu Y, Qiu Y. Probabilistic neural transfer function estimation with Bayesian system identification. PLoS Comput Biol. 2024 Jul; 20(7):e1012354. PMID: 39083559; PMCID: PMC11318871.
      Citations:    Fields:    Translation:HumansAnimalsCells
    5. Turishcheva P, Fahey PG, Vystrcilov? M, Hansel L, Froebe R, Ponder K, Qiu Y, Willeke KF, Bashiri M, Baikulov R, Zhu Y, Ma L, Yu S, Huang T, Li BM, Wulf W, Kudryashova N, Hennig MH, Rochefort NL, Onken A, Wang E, Ding Z, Tolias AS, Sinz FH, Ecker AS. Retrospective for the Dynamic Sensorium Competition for predicting large-scale mouse primary visual cortex activity from videos. ArXiv. 2024 Jul 12. PMID: 39040641; PMCID: PMC11261979.
      Citations:    
    6. Turishcheva P, Fahey PG, Hansel L, Froebe R, Ponder K, Vystrcilov? M, Willeke KF, Bashiri M, Wang E, Ding Z, Tolias AS, Sinz FH, Ecker AS, Turishcheva P, Fahey PG, Hansel L, Froebe R, Ponder K, Vystrcilov? M, Willeke KF, Bashiri M, Wang E, Ding Z, Tolias AS, Sinz FH, Ecker AS, Qiu Y. The Dynamic Sensorium competition for predicting large-scale mouse visual cortex activity from videos. ArXiv. 2024 Jul 12. PMID: 37396602; PMCID: PMC10312815.
      Citations:    
    7. Cadena SA, Willeke KF, Restivo K, Denfield G, Sinz FH, Bethge M, Tolias AS, Ecker AS. Diverse task-driven modeling of macaque V4 reveals functional specialization towards semantic tasks. PLoS Comput Biol. 2024 May; 20(5):e1012056. PMID: 38781156; PMCID: PMC11115319.
      Citations: 1     Fields:    Translation:AnimalsCells
    8. Fu J, Shrinivasan S, Ponder K, Muhammad T, Ding Z, Wang E, Ding Z, Tran DT, Fahey PG, Papadopoulos S, Patel S, Reimer J, Ecker AS, Pitkow X, Haefner RM, Sinz FH, Franke K, Tolias AS, Fu J, Shrinivasan S, Baroni L, Ding Z, Fahey PG, Pierzchlewicz P, Ponder K, Froebe R, Ntanavara L, Muhammad T, Willeke KF, Wang E, Ding Z, Tran DT, Papadopoulos S, Patel S, Reimer J, Ecker AS, Pitkow X, Antolik J, Sinz FH, Haefner RM, Tolias AS, Franke K. Pattern completion and disruption characterize contextual modulation in the visual cortex. bioRxiv. 2024 May 09. PMID: 36993321; PMCID: PMC10054952.
      Citations:    
    9. MICrONS Consortium, Brittain D, Bumbarger DJ, Kapner D, Kinn S, Seshamani S, Suckow S, Torres R, Yin W, Castro MA, Halageri A, Jia Z, Jordan C, Kemnitz N, Lee K, Li K, Lu R, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Silversmith W, Wong W, Wu J, Reimer J, Tolias AS, Schneider-Mizell CM, Bodor AL, Buchanan J, Elabbady L, Gamlin C, Mahalingam G, Takeno M, Dorkenwald S, Bae JA, Macrina T, Turner NL, Seung HS, Reid RC, Collman F, Ma?arico da Costa N. Cell-type-specific inhibitory circuitry from a connectomic census of mouse visual cortex. bioRxiv. 2024 Jan 06. PMID: 36747710; PMCID: PMC9900837.
      Citations:    
    10. Pierzchlewicz PA, Willeke KF, Nix AF, Elumalai P, Restivo K, Shinn T, Nealley C, Rodriguez G, Patel S, Franke K, Tolias AS, Sinz FH. Energy Guided Diffusion for Generating Neurally Exciting Images. bioRxiv. 2023 May 20. PMID: 37292670; PMCID: PMC10245650.
      Citations:    
    11. Ding Z, Fahey PG, Papadopoulos S, Wang EY, Celii B, Papadopoulos C, Kunin AB, Chang A, Fu J, Ding Z, Patel S, Ponder K, Muhammad T, Bae JA, Bodor AL, Brittain D, Buchanan J, Bumbarger DJ, Castro MA, Cobos E, Dorkenwald S, Elabbady L, Halageri A, Jia Z, Jordan C, Kapner D, Kemnitz N, Kinn S, Lee K, Li K, Lu R, Macrina T, Mahalingam G, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Schneider-Mizell CM, Silversmith W, Takeno M, Torres R, Turner NL, Wong W, Wu J, Yin W, Yu SC, Froudarakis E, Sinz F, Seung HS, Collman F, da Costa NM, Reid RC, Walker EY, Pitkow X, Reimer J, Tolias AS. Functional connectomics reveals general wiring rule in mouse visual cortex. bioRxiv. 2023 Mar 30. PMID: 36993398; PMCID: PMC10054929.
      Citations:    
    12. Ding Z, Tran DT, Ponder K, Cobos E, Ding Z, Fahey PG, Wang E, Muhammad T, Fu J, Cadena SA, Papadopoulos S, Patel S, Franke K, Reimer J, Sinz FH, Ecker AS, Pitkow X, Tolias AS. Bipartite invariance in mouse primary visual cortex. bioRxiv. 2023 Mar 16. PMID: 36993218; PMCID: PMC10055119.
      Citations:    
    13. Shen S, Jiang X, Scala F, Fu J, Fahey P, Kobak D, Tan Z, Zhou N, Reimer J, Sinz F, Tolias AS. Distinct organization of two cortico-cortical feedback pathways. Nat Commun. 2022 10 27; 13(1):6389. PMID: 36302912; PMCID: PMC9613627.
      Citations: 5     Fields:    Translation:AnimalsCells
    14. Franke K, Willeke KF, Ponder K, Galdamez M, Zhou N, Muhammad T, Patel S, Froudarakis E, Reimer J, Sinz FH, Tolias AS. State-dependent pupil dilation rapidly shifts visual feature selectivity. Nature. 2022 10; 610(7930):128-134. PMID: 36171291; PMCID: PMC10635574.
      Citations: 10     Fields:    Translation:AnimalsCells
    15. Sinz FH, Sachgau C, Henninger J, Benda J, Grewe J. Simultaneous spike-time locking to multiple frequencies. J Neurophysiol. 2020 06 01; 123(6):2355-2372. PMID: 32374223.
      Citations: 1     Fields:    Translation:AnimalsCells
    16. Cadwell CR, Scala F, Fahey PG, Mulherkar S, Sinz FH, Papadopoulos S, Tan ZH, Johnsson P, Hartmanis L, Li S, Cotton RJ, Tolias KF, Sandberg R, Jiang X, Tolias AS, Kobak D, Berens P. Cell type composition and circuit organization of clonally related excitatory neurons in the juvenile mouse neocortex. Elife. 2020 03 05; 9. PMID: 32134385; PMCID: PMC7162653.
      Citations: 12     Fields:    Translation:AnimalsCells
    17. Henninger J, Krahe R, Sinz F, Benda J. Tracking activity patterns of a multispecies community of gymnotiform weakly electric fish in their neotropical habitat without tagging. J Exp Biol. 2020 02 10; 223(Pt 3). PMID: 31937524.
      Citations: 5     Fields:    Translation:Animals
    18. Walker EY, Sinz FH, Cobos E, Muhammad T, Froudarakis E, Fahey PG, Ecker AS, Reimer J, Pitkow X, Tolias AS. Inception loops discover what excites neurons most using deep predictive models. Nat Neurosci. 2019 12; 22(12):2060-2065. PMID: 31686023.
      Citations: 15     Fields:    Translation:AnimalsCells
    19. Pitkow X, Reimer J, Tolias AS, Sinz FH, Bethge M. Engineering a Less Artificial Intelligence. Neuron. 2019 09 25; 103(6):967-979. PMID: 31557461.
      Citations: 25     Fields:    Translation:Humans
    20. Behr J, Hartmann L, Drewe-Bo? P, Wie?ner T, Wagner G, Geue S, Lee HC, Oberm?ller DM, Kahles A, Sinz FH, R?tsch G, Wachter A. Alternative Splicing Substantially Diversifies the Transcriptome during Early Photomorphogenesis and Correlates with the Energy Availability in Arabidopsis. Plant Cell. 2016 11; 28(11):2715-2734. PMID: 27803310; PMCID: PMC5155347.
      Citations: 38     Fields:    Translation:AnimalsCells
    21. Jiang X, Shen S, Sinz F, Reimer J, Cadwell CR, Patel S, Denfield GH, Froudarakis E, Li S, Walker E, Berens P, Ecker AS, Tolias AS. Response to Comment on "Principles of connectivity among morphologically defined cell types in adult neocortex". Science. 2016 09 09; 353(6304):1108. PMID: 27609883.
      Citations: 8     Fields:    Translation:HumansCells
    22. Jiang X, Shen S, Cadwell CR, Sinz F, Patel S, Berens P, Ecker AS, Tolias AS. Principles of connectivity among morphologically defined cell types in adult neocortex. Science. 2015 Nov 27; 350(6264):aac9462. PMID: 26612957; PMCID: PMC4809866.
      Citations: 313     Fields:    Translation:AnimalsCells
    23. St?ckl A, Sinz F, Benda J, Grewe J. Encoding of social signals in all three electrosensory pathways of Eigenmannia virescens. J Neurophysiol. 2014 Nov 01; 112(9):2076-91. PMID: 25098964.
      Citations: 6     Fields:    Translation:Animals
    24. Froudarakis E, Cotton RJ, Yatsenko D, Saggau P, Berens P, Ecker AS, Sinz FH, Bethge M, Tolias AS. Population code in mouse V1 facilitates readout of natural scenes through increased sparseness. Nat Neurosci. 2014 Jun; 17(6):851-7. PMID: 24747577; PMCID: PMC4106281.
      Citations: 74     Fields:    Translation:Animals
    25. Bethge M, Sinz FH. What is the limit of redundancy reduction with divisive normalization? Neural Comput. 2013 Nov; 25(11):2809-14. PMID: 23895047.
      Citations: 1     Fields:    
    26. Bethge M, Sinz F. Temporal adaptation enhances efficient contrast gain control on natural images. PLoS Comput Biol. 2013; 9(1):e1002889. PMID: 23382664; PMCID: PMC3561086.
      Citations: 9     Fields:    Translation:Humans
    27. Sinz F, Bethge M, Hosseini R. Lower bounds on the redundancy of natural images. Vision Res. 2010 Oct 28; 50(22):2213-22. PMID: 20705084.
      Citations: 3     Fields:    Translation:Humans
    28. Sinz F, Bethge M, Eichhorn J. Natural image coding in V1: how much use is orientation selectivity? PLoS Comput Biol. 2009 Apr; 5(4):e1000336. PMID: 19343216; PMCID: PMC2658886.
      Citations: 15     Fields:    Translation:HumansAnimals
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